BLASTX nr result

ID: Cimicifuga21_contig00020379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020379
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524100.1| ATP-binding cassette transporter, putative [...    59   2e-11
gb|AEP14526.1| ABC transporter, partial [Phytolacca acinosa]           59   3e-11
ref|NP_190799.2| ABC transporter G family member 27 [Arabidopsis...    60   4e-11
ref|XP_002876135.1| abc transporter family protein [Arabidopsis ...    60   4e-11
ref|XP_004136536.1| PREDICTED: ABC transporter G family member 2...    57   4e-11

>ref|XP_002524100.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536668|gb|EEF38310.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 749

 Score = 59.3 bits (142), Expect(2) = 2e-11
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = +1

Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249
           L +V  QGL LAIGA LMD+KKATTLAS+T +TFML G YF K
Sbjct: 633 LCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGYFVK 675



 Score = 35.4 bits (80), Expect(2) = 2e-11
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   SAYFLARTISDLPPDLLMPI 62
           SAYFLART SDLP DL++P+
Sbjct: 586 SAYFLARTTSDLPLDLILPV 605


>gb|AEP14526.1| ABC transporter, partial [Phytolacca acinosa]
          Length = 279

 Score = 59.3 bits (142), Expect(2) = 3e-11
 Identities = 29/43 (67%), Positives = 36/43 (83%)
 Frame = +1

Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249
           L++V  QGL LAIGA+LMD+KKATTL+S+T +TFML G YF K
Sbjct: 167 LSIVAAQGLGLAIGASLMDLKKATTLSSVTVMTFMLAGGYFVK 209



 Score = 35.0 bits (79), Expect(2) = 3e-11
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   SAYFLARTISDLPPDLLMPI 62
           SAYFLART SDLP DL++P+
Sbjct: 120 SAYFLARTTSDLPLDLVLPV 139


>ref|NP_190799.2| ABC transporter G family member 27 [Arabidopsis thaliana]
           gi|332645409|gb|AEE78930.1| ABC transporter G family
           member 27 [Arabidopsis thaliana]
          Length = 784

 Score = 59.7 bits (143), Expect(2) = 4e-11
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +1

Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249
           L +V  QGL LAIGA+LMD+KKATTLAS+T +TFML G YF K
Sbjct: 669 LCIVAAQGLGLAIGASLMDLKKATTLASVTVMTFMLAGGYFVK 711



 Score = 34.3 bits (77), Expect(2) = 4e-11
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   SAYFLARTISDLPPDLLMPI 62
           SAYF+ART SDLP DL++P+
Sbjct: 622 SAYFVARTTSDLPLDLILPV 641


>ref|XP_002876135.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321973|gb|EFH52394.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 752

 Score = 59.7 bits (143), Expect(2) = 4e-11
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +1

Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249
           L +V  QGL LAIGA+LMD+KKATTLAS+T +TFML G YF K
Sbjct: 635 LCIVAAQGLGLAIGASLMDLKKATTLASVTVMTFMLAGGYFVK 677



 Score = 34.3 bits (77), Expect(2) = 4e-11
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   SAYFLARTISDLPPDLLMPI 62
           SAYF+ART SDLP DL++P+
Sbjct: 588 SAYFVARTTSDLPLDLILPV 607


>ref|XP_004136536.1| PREDICTED: ABC transporter G family member 22-like [Cucumis
           sativus]
          Length = 749

 Score = 57.4 bits (137), Expect(2) = 4e-11
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +1

Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249
           L++V  QGL LAIGA LMD+KKATTLAS+T +TFML G +F +
Sbjct: 634 LSIVAAQGLGLAIGATLMDVKKATTLASVTVMTFMLAGGFFVQ 676



 Score = 36.6 bits (83), Expect(2) = 4e-11
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   SAYFLARTISDLPPDLLMPI 62
           SAYFLART SDLP DLL+PI
Sbjct: 587 SAYFLARTTSDLPLDLLLPI 606


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