BLASTX nr result
ID: Cimicifuga21_contig00020379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00020379 (815 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524100.1| ATP-binding cassette transporter, putative [... 59 2e-11 gb|AEP14526.1| ABC transporter, partial [Phytolacca acinosa] 59 3e-11 ref|NP_190799.2| ABC transporter G family member 27 [Arabidopsis... 60 4e-11 ref|XP_002876135.1| abc transporter family protein [Arabidopsis ... 60 4e-11 ref|XP_004136536.1| PREDICTED: ABC transporter G family member 2... 57 4e-11 >ref|XP_002524100.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223536668|gb|EEF38310.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 749 Score = 59.3 bits (142), Expect(2) = 2e-11 Identities = 30/43 (69%), Positives = 34/43 (79%) Frame = +1 Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249 L +V QGL LAIGA LMD+KKATTLAS+T +TFML G YF K Sbjct: 633 LCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGYFVK 675 Score = 35.4 bits (80), Expect(2) = 2e-11 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 3 SAYFLARTISDLPPDLLMPI 62 SAYFLART SDLP DL++P+ Sbjct: 586 SAYFLARTTSDLPLDLILPV 605 >gb|AEP14526.1| ABC transporter, partial [Phytolacca acinosa] Length = 279 Score = 59.3 bits (142), Expect(2) = 3e-11 Identities = 29/43 (67%), Positives = 36/43 (83%) Frame = +1 Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249 L++V QGL LAIGA+LMD+KKATTL+S+T +TFML G YF K Sbjct: 167 LSIVAAQGLGLAIGASLMDLKKATTLSSVTVMTFMLAGGYFVK 209 Score = 35.0 bits (79), Expect(2) = 3e-11 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 3 SAYFLARTISDLPPDLLMPI 62 SAYFLART SDLP DL++P+ Sbjct: 120 SAYFLARTTSDLPLDLVLPV 139 >ref|NP_190799.2| ABC transporter G family member 27 [Arabidopsis thaliana] gi|332645409|gb|AEE78930.1| ABC transporter G family member 27 [Arabidopsis thaliana] Length = 784 Score = 59.7 bits (143), Expect(2) = 4e-11 Identities = 30/43 (69%), Positives = 35/43 (81%) Frame = +1 Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249 L +V QGL LAIGA+LMD+KKATTLAS+T +TFML G YF K Sbjct: 669 LCIVAAQGLGLAIGASLMDLKKATTLASVTVMTFMLAGGYFVK 711 Score = 34.3 bits (77), Expect(2) = 4e-11 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = +3 Query: 3 SAYFLARTISDLPPDLLMPI 62 SAYF+ART SDLP DL++P+ Sbjct: 622 SAYFVARTTSDLPLDLILPV 641 >ref|XP_002876135.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297321973|gb|EFH52394.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata] Length = 752 Score = 59.7 bits (143), Expect(2) = 4e-11 Identities = 30/43 (69%), Positives = 35/43 (81%) Frame = +1 Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249 L +V QGL LAIGA+LMD+KKATTLAS+T +TFML G YF K Sbjct: 635 LCIVAAQGLGLAIGASLMDLKKATTLASVTVMTFMLAGGYFVK 677 Score = 34.3 bits (77), Expect(2) = 4e-11 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = +3 Query: 3 SAYFLARTISDLPPDLLMPI 62 SAYF+ART SDLP DL++P+ Sbjct: 588 SAYFVARTTSDLPLDLILPV 607 >ref|XP_004136536.1| PREDICTED: ABC transporter G family member 22-like [Cucumis sativus] Length = 749 Score = 57.4 bits (137), Expect(2) = 4e-11 Identities = 28/43 (65%), Positives = 35/43 (81%) Frame = +1 Query: 121 LTLVKWQGLRLAIGAALMDIKKATTLASIT*ITFMLTGAYFAK 249 L++V QGL LAIGA LMD+KKATTLAS+T +TFML G +F + Sbjct: 634 LSIVAAQGLGLAIGATLMDVKKATTLASVTVMTFMLAGGFFVQ 676 Score = 36.6 bits (83), Expect(2) = 4e-11 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +3 Query: 3 SAYFLARTISDLPPDLLMPI 62 SAYFLART SDLP DLL+PI Sbjct: 587 SAYFLARTTSDLPLDLLLPI 606