BLASTX nr result

ID: Cimicifuga21_contig00020376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020376
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago ...    89   5e-16
ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003528659.1| PREDICTED: uncharacterized protein LOC100819...    87   1e-15
gb|AFK48704.1| unknown [Medicago truncatula]                           87   1e-15
ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago truncatula]
           gi|355483105|gb|AES64308.1| hypothetical protein
           MTR_2g020850 [Medicago truncatula]
          Length = 198

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/92 (51%), Positives = 56/92 (60%)
 Frame = -3

Query: 278 CSSSNKYVTSIFLVFCGICCCFSWFTDSYTDINGVIQYGIVTKXXXXXXXXXXXXXXXXS 99
           CS+ NKY++ I LV CG  C F+ FTDSYT  +G   YGIVT                 S
Sbjct: 55  CSTINKYLSGILLVICGFNCAFTSFTDSYTGSDGQRHYGIVT--MNGLWPSPGSDSVDLS 112

Query: 98  KYKLRLGDFVHALLSIIVFAIVALLDPNTVNC 3
            YKLR GDFVHA LS+IVFA++ LLD N V+C
Sbjct: 113 AYKLRFGDFVHAFLSVIVFAVLGLLDTNVVHC 144


>ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|222864582|gb|EEF01713.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/93 (45%), Positives = 54/93 (58%)
 Frame = -3

Query: 281 ECSSSNKYVTSIFLVFCGICCCFSWFTDSYTDINGVIQYGIVTKXXXXXXXXXXXXXXXX 102
           +C + NKY++ I +  CG  CCFS FTDSY   +G   YGI T                 
Sbjct: 45  QCHTVNKYLSGILMGLCGFSCCFSCFTDSYRGSDGWTHYGIATMKGLWPSSDSAGSSVDL 104

Query: 101 SKYKLRLGDFVHALLSIIVFAIVALLDPNTVNC 3
           S YKLR+GDF HA  S+IVF++++LLD NTV C
Sbjct: 105 SSYKLRVGDFAHAFFSLIVFSVLSLLDSNTVKC 137


>ref|XP_003528659.1| PREDICTED: uncharacterized protein LOC100819528 [Glycine max]
          Length = 220

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = -3

Query: 281 ECSSSNKYVTSIFLVFCGICCCFSWFTDSYTDINGVIQYGIVTKXXXXXXXXXXXXXXXX 102
           EC++SNK+++ I LV CG  C FS FTDSYT  +    YGIVT                 
Sbjct: 62  ECNASNKWLSGILLVACGFSCAFSSFTDSYTGSDNQRHYGIVT--TKGLWPSPASESVDL 119

Query: 101 SKYKLRLGDFVHALLSIIVFAIVALLDPNTVNC 3
           S Y+L+ GDFVHA+LS++VFA++ LLD NTV+C
Sbjct: 120 STYRLKFGDFVHAVLSLLVFAVLGLLDTNTVHC 152


>gb|AFK48704.1| unknown [Medicago truncatula]
          Length = 198

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/92 (51%), Positives = 56/92 (60%)
 Frame = -3

Query: 278 CSSSNKYVTSIFLVFCGICCCFSWFTDSYTDINGVIQYGIVTKXXXXXXXXXXXXXXXXS 99
           CS+ NKY++ I LV CG  C F+ FTDSYT  +G   YGIVT                 S
Sbjct: 55  CSTINKYLSGIPLVICGFNCAFTSFTDSYTGSDGQRHYGIVT--MNGLWPSPGSDSVDLS 112

Query: 98  KYKLRLGDFVHALLSIIVFAIVALLDPNTVNC 3
            YKLR GDFVHA LS+IVFA++ LLD N V+C
Sbjct: 113 AYKLRFGDFVHAFLSVIVFAVLGLLDTNVVHC 144


>ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|222852196|gb|EEE89743.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
 Frame = -3

Query: 281 ECSSSNKYVTSIFLVFCGICCCFSWFTDSYTDINGVIQYGIVT-KXXXXXXXXXXXXXXX 105
           +C + NKY++ I +  CG  CCFS FTDSY   +G   YGI T K               
Sbjct: 45  QCHTVNKYLSGILMGLCGFSCCFSCFTDSYRGSDGWTHYGIATMKGLRPSSDSSAGSSVD 104

Query: 104 XSKYKLRLGDFVHALLSIIVFAIVALLDPNTVNC 3
            S YKLR+GDF HA  S+IVFA+++LLD NTV C
Sbjct: 105 LSSYKLRVGDFAHAFFSLIVFAVLSLLDRNTVKC 138


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