BLASTX nr result

ID: Cimicifuga21_contig00020355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020355
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33793.3| unnamed protein product [Vitis vinifera]              284   4e-74
ref|XP_002334518.1| predicted protein [Populus trichocarpa] gi|2...   245   2e-62
ref|XP_004136401.1| PREDICTED: uncharacterized protein LOC101220...   244   3e-62
ref|XP_002303449.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-61
ref|XP_002518999.1| conserved hypothetical protein [Ricinus comm...   238   2e-60

>emb|CBI33793.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  284 bits (726), Expect = 4e-74
 Identities = 161/309 (52%), Positives = 211/309 (68%), Gaps = 3/309 (0%)
 Frame = +1

Query: 142  RSFDLDILCKEENGDPGNMAFVSALDCLSLFETIHRIAVGNKEECIQVEAISVMNLILMR 321
            R FD ++L K+E+ + G    VS ++ +SLFE +H+IAVG+ EEC+ +EA+S+MN+ILMR
Sbjct: 33   RLFDAEVLRKKEHWEHGTAMLVSCVNWVSLFELMHQIAVGSTEECVILEAVSIMNVILMR 92

Query: 322  SNPCLEREKFGXXXXXXXXXXXXQKNAGLQMQKQAVHLLFLLLNCPKILVSFCSGCKDGM 501
            SN  LEREKFG            +K AGL +QKQA+HLL+LLLN P +LV FCSGCK+ M
Sbjct: 93   SNAYLEREKFGTLVLKSVSQLL-RKEAGLCVQKQAMHLLYLLLNSPNLLVIFCSGCKEEM 151

Query: 502  SGAAANSPKDDALLTFRGFSTILESLAECVKCRGHGAQELKLRRLSVKVLAFVASSGKLG 681
             GA   +        FR FS IL+ LA CV C G+G QELKLRR ++ +LAF+A SGK G
Sbjct: 152  KGAEDENNDAKNASAFREFSVILDGLANCVACCGNGTQELKLRRNAIIMLAFLA-SGKSG 210

Query: 682  FEVFLNPKLSEGSNFLELIMQALVSEMDXXXXXXXXXXXXCRERTSLIREALILVNRLAS 861
            FE+ L  KLS+ +NFL LI+Q LVSEMD             +ERT LIREALI +NRL S
Sbjct: 211  FEILLGHKLSKQTNFLVLILQLLVSEMDVEVGKSTEPPEIFKERTLLIREALIFLNRLVS 270

Query: 862  SPAYSGSVLQVLTSSRDRVSLTVDVVNGGMSRKGK---SDDGIRKRKAEDEILELARVFR 1032
            +P+YS +VL+VLTSSRD  SLT+D+ N  +SR G+     +   ++  E EI++LARVFR
Sbjct: 271  NPSYSTAVLRVLTSSRDVASLTIDIAN-RLSRVGQGHWQSENAARQMRESEIVDLARVFR 329

Query: 1033 SRVFAYLGN 1059
             RVF+YLG+
Sbjct: 330  KRVFSYLGD 338


>ref|XP_002334518.1| predicted protein [Populus trichocarpa] gi|222872780|gb|EEF09911.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  245 bits (625), Expect = 2e-62
 Identities = 148/358 (41%), Positives = 217/358 (60%), Gaps = 5/358 (1%)
 Frame = +1

Query: 1    RDNVVVEGVYPKNSNVEIYQSGKVHTGVQFGVRRNGTSFLGNDFSSIRSFDLDILCKEEN 180
            RDN+ +EG+   +S     +   + + + +     G S LG     I+SF    LCK+  
Sbjct: 68   RDNIKIEGLCSGDS----LEGQDLFSMISYEASNVGCSSLG-----IKSFYPKHLCKKRC 118

Query: 181  GDPGNMAFVSALDCLSLFETIHRIAVGNKEECIQVEAISVMNLILMRSNPCLEREKFGXX 360
             +      +S+++ + L ET+ +IAV N EEC+++EA+S+MN+ILM SN   E EKFG  
Sbjct: 119  WNAEISLLLSSVNWVLLLETMLQIAVRNTEECVRLEAVSIMNVILMSSNAQTEMEKFGQS 178

Query: 361  XXXXXXXXXXQKNAGLQMQKQAVHLLFLLLNCPKILVSFCSGCKDGMSGAAANSPKDDAL 540
                      ++ AGL++QK+A+HLLFLLLNC K+L  FCSGCK+     + N+ K+ + 
Sbjct: 179  PIFESIAQLLKREAGLRVQKEALHLLFLLLNCSKLLSIFCSGCKEEEIADSTNNKKNTS- 237

Query: 541  LTFRGFSTILESLAECVKCRGHGAQELKLRRLSVKVLAFVASSGKLGFEVFLNPKLSEGS 720
             T +GFS+IL  LAEC+ C G+  Q+++L + ++ +LAF+ASSGK GFE+ +  KL   +
Sbjct: 238  -TPKGFSSILVGLAECIACSGNSLQDIELCKRAIIMLAFLASSGKFGFEIMVTHKLRGET 296

Query: 721  NFLELIMQALVSEMDXXXXXXXXXXXXCRERTSLIREALILVNRLASSPAYSGSVLQVLT 900
            NFL LI+Q LVSEM+             + RTSLIREALIL+NRL S+  YS  VL++LT
Sbjct: 297  NFLMLILQVLVSEMN--VEASAEPARSIKARTSLIREALILLNRLVSNTGYSAIVLRILT 354

Query: 901  SSRDRVSLTVDVVNGGMSRKGKSDDGIRKRKA-----EDEILELARVFRSRVFAYLGN 1059
            + RD  +LT+D+     SR  + D  +R         E EI+EL + F+ RVFAYLG+
Sbjct: 355  ARRDMATLTIDIA----SRLSQEDQSLRLSDVNGHVKESEIVELGQAFKKRVFAYLGD 408


>ref|XP_004136401.1| PREDICTED: uncharacterized protein LOC101220265 [Cucumis sativus]
          Length = 732

 Score =  244 bits (623), Expect = 3e-62
 Identities = 148/358 (41%), Positives = 216/358 (60%), Gaps = 4/358 (1%)
 Frame = +1

Query: 1    RDNVVVEGVYPKNSNVEIYQSGKVHTGVQFGVRRNGTSFLGND-FSSIRSFDLDILCKEE 177
            R+ V++ G+  +N+ V+ + S     G +F +     S  G+   +S R    ++LCK  
Sbjct: 378  RETVMIGGLGSRNNVVDSHGSQSAE-GDEFSLANMDESSHGSGAVASTRLPGAELLCKNR 436

Query: 178  NGDPGNMAFVSALDCLSLFETIHRIAVGNKEECIQVEAISVMNLILMRSNPCLEREKFGX 357
            N    N+  V  ++ +S FE +H++A  +  +C+++EAISVMNLILMR+N  LE+EKFG 
Sbjct: 437  NLKK-NINLVPQVNWVSFFEAMHQVAKTHSAKCVRIEAISVMNLILMRNNTYLEKEKFGQ 495

Query: 358  XXXXXXXXXXXQKNAGLQMQKQAVHLLFLLLNCPKILVSFCSGCKDGMSGAAANSPKDDA 537
                       +K +G  +QK AV LLFL+LNCP   V+FCSGCK+  +    N     A
Sbjct: 496  ALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTFFVAFCSGCKEAEANEVGNENVRSA 555

Query: 538  LLTFRGFSTILESLAECVKCRGHGAQELKLRRLSVKVLAFVASSGKLGFEVFLNPKLSEG 717
               F+ F TIL  LA+C+ C G+G +ELKLR+ +V +LAF+ASSGK GFE+  + KL   
Sbjct: 556  -GGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAGFEILTSNKLYTY 614

Query: 718  SNFLELIMQALVSEMDXXXXXXXXXXXXCRERTSLIREALILVNRLASSPAYSGSVLQVL 897
            SNFL LI+Q + SE++              ER  L+RE LIL NRLAS   YS ++L+V+
Sbjct: 615  SNFLTLILQVVASELE-QEKTVPEPMENLEERALLLREVLILFNRLASHSLYSMTILRVV 673

Query: 898  TSSRDRVSLTVDVVN---GGMSRKGKSDDGIRKRKAEDEILELARVFRSRVFAYLGNN 1062
            T+SRD  +LT+DV N      +R G+ D   RK + E E+++LA+VFR R+ +YLGN+
Sbjct: 674  TNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMR-ESEVVDLAQVFRKRLLSYLGNS 730


>ref|XP_002303449.1| predicted protein [Populus trichocarpa] gi|222840881|gb|EEE78428.1|
            predicted protein [Populus trichocarpa]
          Length = 805

 Score =  242 bits (617), Expect = 2e-61
 Identities = 141/342 (41%), Positives = 203/342 (59%), Gaps = 1/342 (0%)
 Frame = +1

Query: 1    RDNVVVEGVYPKNSNVEIYQSGKVHTGVQFGVRRNGTSFLGNDFSSIRSFDLDILCKEEN 180
            RDN+ +EG         +   G +     F V  + TS +G     IRSFDL  LCK+  
Sbjct: 455  RDNIKIEG---------LCSGGSLGGQDLFSVVSHETSHVGCSSHGIRSFDLKHLCKKRC 505

Query: 181  GDPGNMAFVSALDCLSLFETIHRIAVGNKEECIQVEAISVMNLILMRSNPCLEREKFGXX 360
             +      +++++ +SLFE + R+AV N EEC+++EA+S+MN+ILM +N   +REKFG  
Sbjct: 506  WNADTSLLLTSVNWVSLFELMLRVAVSNTEECVRLEAVSIMNVILMSTNAFTQREKFGQL 565

Query: 361  XXXXXXXXXXQKNAGLQMQKQAVHLLFLLLNCPKILVSFCSGCKDGMSGAAANSPKDDAL 540
                      ++ AG ++QK+A+HLLFLLLNC K+L  FCSGCK+     + N  K  + 
Sbjct: 566  PIFESIAQLLKREAGSRVQKEALHLLFLLLNCSKLLSIFCSGCKEAEISDSTNDKKITS- 624

Query: 541  LTFRGFSTILESLAECVKCRGHGAQELKLRRLSVKVLAFVASSGKLGFEVFLNPKLSEGS 720
             T +GFS+ LE LAEC+ C G+  Q+++LR+ ++ +LAF+ASSGK GFE+ +  KL   +
Sbjct: 625  -TPKGFSSTLEGLAECIACSGYSLQDIELRKRAIIMLAFLASSGKPGFEIMVTCKLPGET 683

Query: 721  NFLELIMQALVSEMDXXXXXXXXXXXXCRERTSLIREALILVNRLASSPAYSGSVLQVLT 900
            NFL LI+Q LVSEMD             + RT LIREALIL+NRL S+P YS   L+VLT
Sbjct: 684  NFLMLILQVLVSEMD--VEASAEPERSIKARTLLIREALILLNRLVSNPGYSAIALRVLT 741

Query: 901  SSRDRVSLTVDVVNG-GMSRKGKSDDGIRKRKAEDEILELAR 1023
            + RD   LT+D+ N      +      ++    E EI+EL +
Sbjct: 742  ARRDMAILTIDIANRLSQEDQRHRQSDVQGHVKESEIVELGQ 783


>ref|XP_002518999.1| conserved hypothetical protein [Ricinus communis]
            gi|223541986|gb|EEF43532.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 651

 Score =  238 bits (607), Expect = 2e-60
 Identities = 136/302 (45%), Positives = 194/302 (64%), Gaps = 3/302 (0%)
 Frame = +1

Query: 163  LCKEENGDPGNMAFVSALDCLSLFETIHRIAVGNKEECIQVEAISVMNLILMRSNPCLER 342
            +CK+   D       S ++ +SLFE +H+IAV   +  +++EAIS+MN+IL+R+N   ER
Sbjct: 352  VCKKGFSDADIGLPFSCVNWVSLFELLHQIAVRKTQGRVRLEAISIMNVILLRTNAHAER 411

Query: 343  EKFGXXXXXXXXXXXXQKNAGLQMQKQAVHLLFLLLNCPKILVSFCSGCKDGMSGAAANS 522
            E FG            ++ AG  +QK+++ LLFLLLNCPK+L  F SGCK+G    AAN 
Sbjct: 412  EIFGQAPVFESIAQFLKREAGSYVQKESLDLLFLLLNCPKLLSVFHSGCKEG--DIAAND 469

Query: 523  PKDDALLTFRGFSTILESLAECVKCRGHGAQELKLRRLSVKVLAFVASSGKLGFEVFLNP 702
              + +  T +GFS ILE LA+C+ C G+  ++++LR+ +V +LAF+A+SGK GFE+ +N 
Sbjct: 470  ANNAS--TRKGFSAILEGLADCIACSGNDIEDIQLRKRAVIMLAFLAASGKSGFEILVNH 527

Query: 703  KLSEGSNFLELIMQALVSEMDXXXXXXXXXXXXCRERTSLIREALILVNRLASSPAYSGS 882
            KL  G NFL LI+Q L+SEMD             + R  L+RE LIL+NRL S+P YS  
Sbjct: 528  KLHGGKNFLMLILQVLISEMDVEMSVSSESAESIKARVLLMREVLILLNRLVSNPGYSAV 587

Query: 883  VLQVLTSSRDRVSLTVDVVNGGMSRKG---KSDDGIRKRKAEDEILELARVFRSRVFAYL 1053
            VLQVLT+SR+  SLT+D+V   +SRK    +  D I ++  E EI++LARV + RVF YL
Sbjct: 588  VLQVLTASREMASLTIDIVT-RLSRKDQILRLSDSITRQMRESEIVDLARVLKKRVFTYL 646

Query: 1054 GN 1059
            G+
Sbjct: 647  GD 648


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