BLASTX nr result

ID: Cimicifuga21_contig00020350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020350
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513002.1| conserved hypothetical protein [Ricinus comm...   417   e-114
ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 ...   409   e-112
ref|XP_003607078.1| hypothetical protein MTR_4g072040 [Medicago ...   397   e-108
gb|AFK47694.1| unknown [Lotus japonicus]                              396   e-108

>ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis]
           gi|223548013|gb|EEF49505.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score =  417 bits (1071), Expect = e-114
 Identities = 211/296 (71%), Positives = 240/296 (81%)
 Frame = +3

Query: 108 AFTTLSWTNSVSPTSFHISRPQCMAVNNCFKVICINKDDTASFTNHQSHKKNQMTVSVTG 287
           A T L+WT S+SP S HI  PQ  +  +  ++      D       Q+ K+NQMTVSVTG
Sbjct: 7   ATTALTWTRSISPPSLHI--PQSFSRYDTRRLSVCGASD-------QTPKENQMTVSVTG 57

Query: 288 ATGFIGQRLVQRLHSDNHHVKVLTRSRSKAQLVFPVRDFPGIVIAEESEWKNCIQGSNAV 467
           ATGFIG+RLVQRLH+DNH++ VLTRS+SKAQL+FP +DFP IVIAEE EWKN IQGS+AV
Sbjct: 58  ATGFIGRRLVQRLHADNHNIHVLTRSKSKAQLIFPGKDFPRIVIAEEPEWKNSIQGSDAV 117

Query: 468 VNLAGMPISTRWSSEVKKEIKKSRINATSKVVDLINNSKDDVRPTVLVSANAIGYYGTSE 647
           VNLAGMPISTRWSSE+KKEIK+SRI  TSKVVDLIN+S + VRPTVLVSA A+GYYG+SE
Sbjct: 118 VNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVDLINDSPEGVRPTVLVSATAVGYYGSSE 177

Query: 648 TQAFDEQSPSGNDYLAEVCREWEGSALKVDKDXXXXXXXXXXXXXKDGGALAKMIPLFMM 827
           T+ FDE SPSGNDYLA VCREWEG+ALKV+KD             K+GGALAKMIPLFMM
Sbjct: 178 TRVFDESSPSGNDYLAGVCREWEGTALKVNKDVRLALIRIGVVLGKNGGALAKMIPLFMM 237

Query: 828 FAGGPLGTGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLTEMCAQLG 995
           FAGGPLG+G+QWFSWIHL+DIVNLIYEAL NPSYKGVINGTAPNPVRL EMC QLG
Sbjct: 238 FAGGPLGSGRQWFSWIHLEDIVNLIYEALINPSYKGVINGTAPNPVRLAEMCEQLG 293


>ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  413 bits (1062), Expect = e-113
 Identities = 207/295 (70%), Positives = 239/295 (81%), Gaps = 1/295 (0%)
 Frame = +3

Query: 114 TTLSWTNSVSPTSFHISRPQCMAVNNCFKV-ICINKDDTASFTNHQSHKKNQMTVSVTGA 290
           TTL+W+NS+S +S  I  PQ  ++    ++ +C   D T            +MTVSVTGA
Sbjct: 10  TTLTWSNSISTSSLQI--PQVFSIRCTKRLRVCCASDQT-----------QKMTVSVTGA 56

Query: 291 TGFIGQRLVQRLHSDNHHVKVLTRSRSKAQLVFPVRDFPGIVIAEESEWKNCIQGSNAVV 470
           TGFIG+RLVQRLH+D H V+VLTRSRSKAQL+FPV++FPGI+IAEE +WK+CIQGSNAVV
Sbjct: 57  TGFIGKRLVQRLHADKHSVRVLTRSRSKAQLIFPVKEFPGILIAEERDWKDCIQGSNAVV 116

Query: 471 NLAGMPISTRWSSEVKKEIKKSRINATSKVVDLINNSKDDVRPTVLVSANAIGYYGTSET 650
           NLAG+PISTRWS EVKKEIK+SRI  TSKVVDLIN S + VRP VLVSA A+GYYG+SET
Sbjct: 117 NLAGLPISTRWSPEVKKEIKQSRIKVTSKVVDLINGSPEGVRPAVLVSATAVGYYGSSET 176

Query: 651 QAFDEQSPSGNDYLAEVCREWEGSALKVDKDXXXXXXXXXXXXXKDGGALAKMIPLFMMF 830
           Q FDE+SPSGNDYLAEVCREWE +ALKV+KD             KDGGALAKMIPLFM+F
Sbjct: 177 QVFDERSPSGNDYLAEVCREWEATALKVNKDVRLALIRIGVVLGKDGGALAKMIPLFMLF 236

Query: 831 AGGPLGTGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLTEMCAQLG 995
           AGGP+G+G+QWFSWIHLDDIVNLIYEAL+NPSYKGVINGTAPNPVRL EMC QLG
Sbjct: 237 AGGPMGSGQQWFSWIHLDDIVNLIYEALTNPSYKGVINGTAPNPVRLAEMCEQLG 291


>ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 [Vitis vinifera]
           gi|297744722|emb|CBI37984.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  409 bits (1052), Expect = e-112
 Identities = 212/303 (69%), Positives = 234/303 (77%)
 Frame = +3

Query: 87  ELFFNAAAFTTLSWTNSVSPTSFHISRPQCMAVNNCFKVICINKDDTASFTNHQSHKKNQ 266
           EL    AAF   SW +S+SP S H  +   M  +   +V C      +     QS K+NQ
Sbjct: 2   ELCRTTAAF---SWAHSISP-SLHFPQRFSMCESKGLRVCCAVNASASG----QSQKENQ 53

Query: 267 MTVSVTGATGFIGQRLVQRLHSDNHHVKVLTRSRSKAQLVFPVRDFPGIVIAEESEWKNC 446
           M VSVTGATGFIG+RLVQRL +DNH V VLTRSRSKAQ +FP +DF GIVIAEE EWK+C
Sbjct: 54  MIVSVTGATGFIGRRLVQRLLADNHRVHVLTRSRSKAQFIFPAKDFRGIVIAEEPEWKDC 113

Query: 447 IQGSNAVVNLAGMPISTRWSSEVKKEIKKSRINATSKVVDLINNSKDDVRPTVLVSANAI 626
           IQGSNAVVNLAGMPISTRWS E+KKEIK+SR+  TSKVVD+INNS+D+VRPTVLVSA+AI
Sbjct: 114 IQGSNAVVNLAGMPISTRWSPEIKKEIKESRVRITSKVVDIINNSQDEVRPTVLVSASAI 173

Query: 627 GYYGTSETQAFDEQSPSGNDYLAEVCREWEGSALKVDKDXXXXXXXXXXXXXKDGGALAK 806
           GYYG SET  F EQSPSGNDYLAEVCREWEG A KV+KD             KDGGALAK
Sbjct: 174 GYYGASETLVFKEQSPSGNDYLAEVCREWEGKAFKVNKDVRLVLIRIGVVLGKDGGALAK 233

Query: 807 MIPLFMMFAGGPLGTGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLTEMCA 986
           MIPLF +FAGGPLG+GKQWFSWIHLDDIV LIYEALSNPSY GVINGTAPNPVRL EMC 
Sbjct: 234 MIPLFNLFAGGPLGSGKQWFSWIHLDDIVELIYEALSNPSYTGVINGTAPNPVRLAEMCD 293

Query: 987 QLG 995
            LG
Sbjct: 294 HLG 296


>ref|XP_003607078.1| hypothetical protein MTR_4g072040 [Medicago truncatula]
           gi|355508133|gb|AES89275.1| hypothetical protein
           MTR_4g072040 [Medicago truncatula]
          Length = 350

 Score =  397 bits (1019), Expect = e-108
 Identities = 199/295 (67%), Positives = 230/295 (77%), Gaps = 1/295 (0%)
 Frame = +3

Query: 114 TTLSWTNSVSPTSFHISRPQCMA-VNNCFKVICINKDDTASFTNHQSHKKNQMTVSVTGA 290
           T L+W+++VSP S H+ +P         F+V C            QS K +QM +SVTGA
Sbjct: 7   TALTWSHTVSP-SLHLPQPLLFTRETRKFRVWC---------GTDQSSKGDQMIISVTGA 56

Query: 291 TGFIGQRLVQRLHSDNHHVKVLTRSRSKAQLVFPVRDFPGIVIAEESEWKNCIQGSNAVV 470
           TGFIG+RLVQ+L ++NH V VLTRS+SKA+L+FPV+DFPG+ IA E EWK+CIQGS  VV
Sbjct: 57  TGFIGKRLVQKLQAENHRVHVLTRSKSKAELIFPVKDFPGVKIAGEPEWKDCIQGSTGVV 116

Query: 471 NLAGMPISTRWSSEVKKEIKKSRINATSKVVDLINNSKDDVRPTVLVSANAIGYYGTSET 650
           NLAG+PISTRWSSE+KKEIK+SR+  TSKVVDLI  + D+ RP VLVSA A+GYYGTSET
Sbjct: 117 NLAGLPISTRWSSEIKKEIKQSRVRVTSKVVDLIKRAPDETRPQVLVSATAVGYYGTSET 176

Query: 651 QAFDEQSPSGNDYLAEVCREWEGSALKVDKDXXXXXXXXXXXXXKDGGALAKMIPLFMMF 830
           Q FDEQSPSG DYLAEVCREWE +ALK + D             KDGGALAKMIPLFMMF
Sbjct: 177 QVFDEQSPSGKDYLAEVCREWESTALKANGDVRVALIRIGVVLGKDGGALAKMIPLFMMF 236

Query: 831 AGGPLGTGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLTEMCAQLG 995
           AGGPLG+G QWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRL+E+C QLG
Sbjct: 237 AGGPLGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLSELCEQLG 291


>gb|AFK47694.1| unknown [Lotus japonicus]
          Length = 349

 Score =  396 bits (1018), Expect = e-108
 Identities = 198/294 (67%), Positives = 230/294 (78%)
 Frame = +3

Query: 114 TTLSWTNSVSPTSFHISRPQCMAVNNCFKVICINKDDTASFTNHQSHKKNQMTVSVTGAT 293
           T L+ +++V P S H+ RP        F+V C         ++ QS   NQM +SVTGAT
Sbjct: 7   TALTSSHTVCP-SLHLLRPLSTREGRSFRVWC---------SSDQSSMGNQMIISVTGAT 56

Query: 294 GFIGQRLVQRLHSDNHHVKVLTRSRSKAQLVFPVRDFPGIVIAEESEWKNCIQGSNAVVN 473
           GFIG+RLVQ+LH++NH V VLTRS+SKA+L+FPV+DFPGI IAEESEWKN IQGS  VVN
Sbjct: 57  GFIGRRLVQKLHAENHGVHVLTRSKSKAELIFPVKDFPGIKIAEESEWKNSIQGSTGVVN 116

Query: 474 LAGMPISTRWSSEVKKEIKKSRINATSKVVDLINNSKDDVRPTVLVSANAIGYYGTSETQ 653
           LAG+PISTRWSSE+KKEIK+SRI  TSKV +LIN++ DD+RP V VSA A+GYYGTSETQ
Sbjct: 117 LAGLPISTRWSSEIKKEIKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQ 176

Query: 654 AFDEQSPSGNDYLAEVCREWEGSALKVDKDXXXXXXXXXXXXXKDGGALAKMIPLFMMFA 833
            FDEQSPSGNDYLAEVCREWE +AL+V+ D             K+GGALAKMIPLF MFA
Sbjct: 177 VFDEQSPSGNDYLAEVCREWESTALRVNGDVRVALIRIGVVLGKEGGALAKMIPLFKMFA 236

Query: 834 GGPLGTGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLTEMCAQLG 995
           GGPLG+G QWFSWIHLDDIV+LIYEAL NPSYKGVINGTAPNPVR  E+C QLG
Sbjct: 237 GGPLGSGNQWFSWIHLDDIVDLIYEALRNPSYKGVINGTAPNPVRFAELCVQLG 290


Top