BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020346
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512769.1| pentatricopeptide repeat-containing protein,...   152   4e-35
ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_003623854.1| Pentatricopeptide repeat-containing protein ...   124   6e-27
gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]   124   6e-27

>ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547780|gb|EEF49272.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/106 (65%), Positives = 85/106 (80%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           MQ+G+ + A  +L +MQ   +KPN IT+ S LP CTNLES +GGKEIHGY FRHW IED+
Sbjct: 288 MQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDV 347

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILANSMHGK 2
            + TALVL+YAKCGDL LS+ VFN +PR+D VAWNT+I+ANSMHGK
Sbjct: 348 TITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGK 393



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/80 (38%), Positives = 52/80 (65%)
 Frame = -3

Query: 259 LKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDIMVGTALVLMYAKCGDLHLSQ 80
           ++ N +TVSS+LPAC +    K G+E+HG+  R+ +  ++ V +ALV MYA    L  ++
Sbjct: 174 IRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQAR 231

Query: 79  KVFNNLPRRDTVAWNTIILA 20
            VF+++  RD V+WN ++ A
Sbjct: 232 LVFDSMYHRDIVSWNVMLTA 251


>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
           protein product [Vitis vinifera]
          Length = 687

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/105 (61%), Positives = 85/105 (80%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           MQ+GR ++A ++L +MQ    KPN IT++SVLPACTNLES +GGK+IHGY FRHW  +D+
Sbjct: 291 MQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDL 350

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILANSMHG 5
              TALV MYAKCGDL LS++VF+ + +RDTV+WNT+I+A SMHG
Sbjct: 351 TTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHG 395



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/79 (48%), Positives = 58/79 (73%)
 Frame = -3

Query: 256 KPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDIMVGTALVLMYAKCGDLHLSQK 77
           +PN +TVSS+LPACT+L+  K G+E+HG+  R+ +  ++ V +ALV MYA C  +  +Q 
Sbjct: 176 RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQL 235

Query: 76  VFNNLPRRDTVAWNTIILA 20
           VF+++ RRDTV+WN +I A
Sbjct: 236 VFDSMSRRDTVSWNVLITA 254



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/78 (30%), Positives = 43/78 (55%)
 Frame = -3

Query: 262 CLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDIMVGTALVLMYAKCGDLHLS 83
           C++P+ + + SV  AC +L      K +H  + R     D+++G AL+ MY KC     +
Sbjct: 73  CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGA 132

Query: 82  QKVFNNLPRRDTVAWNTI 29
           + VF  +P RD ++W ++
Sbjct: 133 RLVFEGMPFRDVISWTSM 150


>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/105 (58%), Positives = 82/105 (78%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           M++G+ ++A ++L +MQ    KPN IT+SS LPAC+ LES + GKE+H Y FRHWLI D+
Sbjct: 345 MENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDL 404

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILANSMHG 5
              TALV MYAKCGDL+LS+ VF+ + R+D VAWNT+I+AN+MHG
Sbjct: 405 TTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHG 449



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 36/80 (45%), Positives = 59/80 (73%)
 Frame = -3

Query: 259 LKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDIMVGTALVLMYAKCGDLHLSQ 80
           +KPN +T+SS+LPAC+ L+  K G+ IHG++ RH +IE++ V +ALV +YA+C  +  ++
Sbjct: 229 VKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQAR 288

Query: 79  KVFNNLPRRDTVAWNTIILA 20
            VF+ +P RD V+WN ++ A
Sbjct: 289 LVFDLMPHRDVVSWNGVLTA 308


>ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498869|gb|AES80072.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/105 (54%), Positives = 80/105 (76%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           M++GR ++A ++  +MQ    KPN IT+SS+LPAC+  E+ + GKEIH Y FRHW + D+
Sbjct: 377 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 436

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILANSMHG 5
              TAL+ MYAKCGDL+LS+ VF+ + R+D VAWNT+I+AN+MHG
Sbjct: 437 TSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHG 481



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/100 (41%), Positives = 67/100 (67%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           ++ G  ++  D+  +M    +KPN +TVSS+LPAC  L+  K GKEIHG++ RH ++ ++
Sbjct: 241 VKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNL 300

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILA 20
            V +ALV +YAKC  +  ++ VF+ +P RD V+WN ++ A
Sbjct: 301 FVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTA 340


>gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/105 (54%), Positives = 80/105 (76%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           M++GR ++A ++  +MQ    KPN IT+SS+LPAC+  E+ + GKEIH Y FRHW + D+
Sbjct: 291 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 350

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILANSMHG 5
              TAL+ MYAKCGDL+LS+ VF+ + R+D VAWNT+I+AN+MHG
Sbjct: 351 TSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHG 395



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/100 (41%), Positives = 67/100 (67%)
 Frame = -3

Query: 319 MQSGRMKQARDLLVQMQGCCLKPNHITVSSVLPACTNLESSKGGKEIHGYSFRHWLIEDI 140
           ++ G  ++  D+  +M    +KPN +TVSS+LPAC  L+  K GKEIHG++ RH ++ ++
Sbjct: 155 VKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNL 214

Query: 139 MVGTALVLMYAKCGDLHLSQKVFNNLPRRDTVAWNTIILA 20
            V +ALV +YAKC  +  ++ VF+ +P RD V+WN ++ A
Sbjct: 215 FVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTA 254