BLASTX nr result
ID: Cimicifuga21_contig00020345
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00020345 (512 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249... 79 5e-13 ref|XP_003521448.1| PREDICTED: uncharacterized protein LOC100816... 78 7e-13 ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814... 76 2e-12 ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thalian... 74 9e-12 ref|XP_002326250.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 >ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera] Length = 394 Score = 78.6 bits (192), Expect = 5e-13 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 7/137 (5%) Frame = -2 Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKS----- 227 M +H+KQ W Q +SE + K+PRL + Q +ALPLF+PEP S Sbjct: 1 MDFHLKQ-WRNQHESEE--APSGKMPRLLLDQQ-------PSGSALPLFVPEPNSKISNL 50 Query: 226 -AFSDSTLTLAPTRFARVR-NHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIKKSLP 53 AF DST T TRF++ ++FS LIF++ML A +P +L++ IKKSL Sbjct: 51 SAFPDSTTTA--TRFSKTGGSYFSLAQWQELELQALIFRHMLAGAAVPPELLQLIKKSLL 108 Query: 52 DNNPAFYLHHPVHQYKH 2 N+P +YL HP+ Y+H Sbjct: 109 -NHPPYYLQHPLQHYQH 124 >ref|XP_003521448.1| PREDICTED: uncharacterized protein LOC100816436 [Glycine max] Length = 384 Score = 78.2 bits (191), Expect = 7e-13 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 11/140 (7%) Frame = -2 Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKSA---- 224 M +H+KQ W Q +SE ++K+P+L E H ++ALPLF+PEP S+ Sbjct: 1 MDFHLKQ-WRNQHESEEQ--HSTKMPKLLPE---SHQQQQPSASALPLFVPEPNSSKVST 54 Query: 223 FSDSTLTLAPTR-------FARVRNHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIK 65 SDSTL A F R+ ++FS LIF+YML A +P +L++ IK Sbjct: 55 LSDSTLASATMTSTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIK 114 Query: 64 KSLPDNNPAFYLHHPVHQYK 5 KSL ++P +YLHHP+ Y+ Sbjct: 115 KSLL-HSPHYYLHHPLQHYQ 133 >ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814842 [Glycine max] Length = 388 Score = 76.3 bits (186), Expect = 2e-12 Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 14/143 (9%) Frame = -2 Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKSA---- 224 M +H+K EW Q +SE ST K+P+L E H + ALPLF+PEP S+ Sbjct: 1 MDFHLK-EWRNQHESEEQQHST-KMPKLLPESHHQQ----PSATALPLFVPEPNSSSKVS 54 Query: 223 -FSDSTL---------TLAPTRFARVRNHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIE 74 SDSTL T F R+ ++FS LIF+YML A +P +L++ Sbjct: 55 TLSDSTLAAETETMTTTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQ 114 Query: 73 SIKKSLPDNNPAFYLHHPVHQYK 5 IKKSL ++P ++LHHP+ Y+ Sbjct: 115 PIKKSLL-HSPHYFLHHPLQHYQ 136 >ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thaliana] gi|75206320|sp|Q9SJR5.1|GRF3_ARATH RecName: Full=Growth-regulating factor 3; Short=AtGRF3; AltName: Full=Transcription activator GRF3 gi|4581140|gb|AAD24624.1| unknown protein [Arabidopsis thaliana] gi|21539884|gb|AAM52878.1| transcription activator [Arabidopsis thaliana] gi|111074412|gb|ABH04579.1| At2g36400 [Arabidopsis thaliana] gi|330254154|gb|AEC09248.1| growth-regulating factor 3 [Arabidopsis thaliana] Length = 398 Score = 74.3 bits (181), Expect = 9e-12 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 5/129 (3%) Frame = -2 Query: 373 QEWDEQFQSEHLC-----CSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKSAFSDST 209 ++W Q Q +H S +K+P+ ++ H H TS ALPLF PEP S+ S Sbjct: 6 KQWRSQQQQQHQTESEEQPSAAKIPKHVFDQIHSHTATS---TALPLFTPEPTSSKLSSL 62 Query: 208 LTLAPTRFARVRNHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIKKSLPDNNPAFYL 29 + +RF ++ + FS LI++YML A +P +L+ IKKSL +P+++L Sbjct: 63 SPDSSSRFPKMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLHLSPSYFL 122 Query: 28 HHPVHQYKH 2 HHP+ H Sbjct: 123 HHPLQHLPH 131 >ref|XP_002326250.1| predicted protein [Populus trichocarpa] gi|222833443|gb|EEE71920.1| predicted protein [Populus trichocarpa] Length = 377 Score = 73.9 bits (180), Expect = 1e-11 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 12/137 (8%) Frame = -2 Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRL----HYEYQHPHLHTSDESAALPLFIPEPK-- 230 M +H+KQ W Q + S +K+P+L H QHPH S SAA PLF+PEP Sbjct: 1 MDFHLKQ-WRNQHEESGQQPS-AKMPKLLMDPHQPQQHPH---SSGSAAFPLFLPEPSCK 55 Query: 229 ----SAFSDSTLTLAPTRFARVR-NHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIK 65 SAF DS T A TR ++ N+FS LI+++ML A IP +L++ IK Sbjct: 56 NSNLSAFPDSN-TAANTRLPKIMGNYFSLEQWQELELQALIYRFMLAGAAIPPELLQPIK 114 Query: 64 KSLPDNN-PAFYLHHPV 17 K+L ++ P ++LHHP+ Sbjct: 115 KTLLHSHPPPYFLHHPL 131