BLASTX nr result

ID: Cimicifuga21_contig00020345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020345
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249...    79   5e-13
ref|XP_003521448.1| PREDICTED: uncharacterized protein LOC100816...    78   7e-13
ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814...    76   2e-12
ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thalian...    74   9e-12
ref|XP_002326250.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
          Length = 394

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
 Frame = -2

Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKS----- 227
           M +H+KQ W  Q +SE     + K+PRL  + Q          +ALPLF+PEP S     
Sbjct: 1   MDFHLKQ-WRNQHESEE--APSGKMPRLLLDQQ-------PSGSALPLFVPEPNSKISNL 50

Query: 226 -AFSDSTLTLAPTRFARVR-NHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIKKSLP 53
            AF DST T   TRF++   ++FS           LIF++ML  A +P +L++ IKKSL 
Sbjct: 51  SAFPDSTTTA--TRFSKTGGSYFSLAQWQELELQALIFRHMLAGAAVPPELLQLIKKSLL 108

Query: 52  DNNPAFYLHHPVHQYKH 2
            N+P +YL HP+  Y+H
Sbjct: 109 -NHPPYYLQHPLQHYQH 124


>ref|XP_003521448.1| PREDICTED: uncharacterized protein LOC100816436 [Glycine max]
          Length = 384

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
 Frame = -2

Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKSA---- 224
           M +H+KQ W  Q +SE     ++K+P+L  E    H      ++ALPLF+PEP S+    
Sbjct: 1   MDFHLKQ-WRNQHESEEQ--HSTKMPKLLPE---SHQQQQPSASALPLFVPEPNSSKVST 54

Query: 223 FSDSTLTLAPTR-------FARVRNHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIK 65
            SDSTL  A          F R+ ++FS           LIF+YML  A +P +L++ IK
Sbjct: 55  LSDSTLASATMTSTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIK 114

Query: 64  KSLPDNNPAFYLHHPVHQYK 5
           KSL  ++P +YLHHP+  Y+
Sbjct: 115 KSLL-HSPHYYLHHPLQHYQ 133


>ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814842 [Glycine max]
          Length = 388

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
 Frame = -2

Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKSA---- 224
           M +H+K EW  Q +SE    ST K+P+L  E  H        + ALPLF+PEP S+    
Sbjct: 1   MDFHLK-EWRNQHESEEQQHST-KMPKLLPESHHQQ----PSATALPLFVPEPNSSSKVS 54

Query: 223 -FSDSTL---------TLAPTRFARVRNHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIE 74
             SDSTL         T     F R+ ++FS           LIF+YML  A +P +L++
Sbjct: 55  TLSDSTLAAETETMTTTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQ 114

Query: 73  SIKKSLPDNNPAFYLHHPVHQYK 5
            IKKSL  ++P ++LHHP+  Y+
Sbjct: 115 PIKKSLL-HSPHYFLHHPLQHYQ 136


>ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thaliana]
           gi|75206320|sp|Q9SJR5.1|GRF3_ARATH RecName:
           Full=Growth-regulating factor 3; Short=AtGRF3; AltName:
           Full=Transcription activator GRF3
           gi|4581140|gb|AAD24624.1| unknown protein [Arabidopsis
           thaliana] gi|21539884|gb|AAM52878.1| transcription
           activator [Arabidopsis thaliana]
           gi|111074412|gb|ABH04579.1| At2g36400 [Arabidopsis
           thaliana] gi|330254154|gb|AEC09248.1| growth-regulating
           factor 3 [Arabidopsis thaliana]
          Length = 398

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
 Frame = -2

Query: 373 QEWDEQFQSEHLC-----CSTSKLPRLHYEYQHPHLHTSDESAALPLFIPEPKSAFSDST 209
           ++W  Q Q +H        S +K+P+  ++  H H  TS    ALPLF PEP S+   S 
Sbjct: 6   KQWRSQQQQQHQTESEEQPSAAKIPKHVFDQIHSHTATS---TALPLFTPEPTSSKLSSL 62

Query: 208 LTLAPTRFARVRNHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIKKSLPDNNPAFYL 29
              + +RF ++ + FS           LI++YML  A +P +L+  IKKSL   +P+++L
Sbjct: 63  SPDSSSRFPKMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLHLSPSYFL 122

Query: 28  HHPVHQYKH 2
           HHP+    H
Sbjct: 123 HHPLQHLPH 131


>ref|XP_002326250.1| predicted protein [Populus trichocarpa] gi|222833443|gb|EEE71920.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
 Frame = -2

Query: 391 MAYHVKQEWDEQFQSEHLCCSTSKLPRL----HYEYQHPHLHTSDESAALPLFIPEPK-- 230
           M +H+KQ W  Q +      S +K+P+L    H   QHPH   S  SAA PLF+PEP   
Sbjct: 1   MDFHLKQ-WRNQHEESGQQPS-AKMPKLLMDPHQPQQHPH---SSGSAAFPLFLPEPSCK 55

Query: 229 ----SAFSDSTLTLAPTRFARVR-NHFSXXXXXXXXXXXLIFKYMLVKAPIPAQLIESIK 65
               SAF DS  T A TR  ++  N+FS           LI+++ML  A IP +L++ IK
Sbjct: 56  NSNLSAFPDSN-TAANTRLPKIMGNYFSLEQWQELELQALIYRFMLAGAAIPPELLQPIK 114

Query: 64  KSLPDNN-PAFYLHHPV 17
           K+L  ++ P ++LHHP+
Sbjct: 115 KTLLHSHPPPYFLHHPL 131


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