BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020344
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   372   e-101
ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2...   364   2e-98
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   360   3e-97
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   345   9e-93
ref|XP_002866749.1| hypothetical protein ARALYDRAFT_920064 [Arab...   339   5e-91

>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  372 bits (956), Expect = e-101
 Identities = 191/316 (60%), Positives = 243/316 (76%), Gaps = 4/316 (1%)
 Frame = -1

Query: 939  KHPCTESYNIILSLYKQKGKNLEAAELFSRMINEGANPNSRTYTVVIEHLASLGKLDAAK 760
            K  CTESYNII+SL+ + G + +A E+F RMI+EGA PNSRTYTV+IEHL  LGKLD+A 
Sbjct: 168  KRVCTESYNIIMSLFAKMGNDAKAVEIFYRMIDEGAIPNSRTYTVMIEHLVKLGKLDSAI 227

Query: 759  EVFEILPSMRIKHTVKQYSILAMGFCSVERFDLVKELVREMHLDGMLPNQSMRMSLKCLL 580
            EVF +LP MRIK T+KQYS+L  GF  VERFD VK+LV EM +DG  P ++M  +L+ + 
Sbjct: 228  EVFSVLPLMRIKRTLKQYSVLVDGFVGVERFDEVKKLVNEMKVDGKFPGRAMHSALQRMQ 287

Query: 579  DAGLVEETEDFVRELMPDKRIESIRVSMDCGYEDNEE--EDVDGSLV--DEYEVRLKPWL 412
            +AG VEET++FV+E+ PD+RI+SI    D G +D+E+  E+V+   V  D  EVRLKPWL
Sbjct: 288  EAGFVEETKEFVKEMFPDERIKSIGSCSD-GSDDDEDDYENVNNGDVHTDTSEVRLKPWL 346

Query: 411  DPSALASALSDWNPDDVSALEDANIVWTTRLVCKMLRSFKKVETAWKFFLWVAYQPGEFT 232
            DP ALA+ALS W+P+ VS LEDA  VWTTRLVCK+LR+F   ETAW FF WVAYQPG FT
Sbjct: 347  DPKALANALSQWSPEVVSMLEDAKFVWTTRLVCKVLRNFSSPETAWYFFCWVAYQPG-FT 405

Query: 231  HDIYTLSRMIAILARHGSVDLVDQLISKVKSERIRLSFSTVRLIIDFYGISKEPDAALRV 52
            HD+YT+ RM+ +LARHG V+LVD+LI+K++ E +RL FST+RLIIDFYGISK  DAAL+V
Sbjct: 406  HDVYTVQRMMTLLARHGKVELVDKLITKIRIEGMRLPFSTIRLIIDFYGISKNADAALKV 465

Query: 51   FYDVESISGAMPKAHL 4
            F D   + G++ K +L
Sbjct: 466  FRDDRPLCGSITKFNL 481


>ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  364 bits (934), Expect = 2e-98
 Identities = 184/322 (57%), Positives = 236/322 (73%), Gaps = 10/322 (3%)
 Frame = -1

Query: 939 KHPCTESYNIILSLYKQKGKNLEAAELFSRMINEGANPNSRTYTVVIEHLASLGKLDAAK 760
           K  CTESYNI++ LY QKG++ EA  +F RMI+EGA PNSRTYTV+IEHL + GKLD A 
Sbjct: 25  KRVCTESYNIVMGLYAQKGRDCEAVRVFYRMIHEGAIPNSRTYTVMIEHLVNSGKLDPAI 84

Query: 759 EVFEILPSMRIKHTVKQYSILAMGFCSVERFDLVKELVREMHLDGMLPNQSMRMSLKCLL 580
           E+F +LP MRIK T+KQY +L  GF  +ERFD V+ L+ EM  DG  P ++MR +L+CL 
Sbjct: 85  EIFSVLPLMRIKRTLKQYLVLVEGFVGLERFDGVRTLLDEMRADGKFPGRAMRKALQCLQ 144

Query: 579 DAGLVEETEDFVRELMPDKRIESIRVSMDCGYEDNEEEDVDG----------SLVDEYEV 430
           +AG VEETE+F++E+ PD+RI+SI  S D  ++ + +ED D           +  D  EV
Sbjct: 145 EAGFVEETEEFLKEMFPDERIKSISNSGDISFDKDGDEDGDEDEDEDENHGCAFADIQEV 204

Query: 429 RLKPWLDPSALASALSDWNPDDVSALEDANIVWTTRLVCKMLRSFKKVETAWKFFLWVAY 250
           RLKPWLDP ALA AL+ W+PD VSALEDA  VWTTRLV K+LR+    ETAW FF WVAY
Sbjct: 205 RLKPWLDPRALAKALNKWSPDVVSALEDAKFVWTTRLVWKVLRNINSPETAWDFFCWVAY 264

Query: 249 QPGEFTHDIYTLSRMIAILARHGSVDLVDQLISKVKSERIRLSFSTVRLIIDFYGISKEP 70
           QPG FTH +YT+ RM+ +LA+HG V+LVDQLI+K++SE +RL FST+RLIIDF GISK  
Sbjct: 265 QPG-FTHCVYTVQRMMTLLAKHGKVELVDQLINKIRSEGMRLPFSTIRLIIDFCGISKNA 323

Query: 69  DAALRVFYDVESISGAMPKAHL 4
           DAAL+VF +  ++ G + K +L
Sbjct: 324 DAALKVFREDRALCGPITKYNL 345


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66631-like
            [Vitis vinifera]
          Length = 660

 Score =  360 bits (924), Expect = 3e-97
 Identities = 171/312 (54%), Positives = 240/312 (76%)
 Frame = -1

Query: 939  KHPCTESYNIILSLYKQKGKNLEAAELFSRMINEGANPNSRTYTVVIEHLASLGKLDAAK 760
            K    E+YNI++ LY Q GK+ EA ++F ++I+EGA PNSRTYTVV+EHLA+ GKLD+A 
Sbjct: 167  KQVSIEAYNIVMRLYVQMGKDSEAMQIFHKIISEGAIPNSRTYTVVLEHLANSGKLDSAI 226

Query: 759  EVFEILPSMRIKHTVKQYSILAMGFCSVERFDLVKELVREMHLDGMLPNQSMRMSLKCLL 580
            +VF ILP MRI+ T++QYSIL   F S+ RFD+VK L+ EM +DG+LP ++M++SL+ + 
Sbjct: 227  KVFNILPLMRIRRTLRQYSILVEEFTSINRFDVVKALLDEMQIDGILPGRAMQLSLQRMQ 286

Query: 579  DAGLVEETEDFVRELMPDKRIESIRVSMDCGYEDNEEEDVDGSLVDEYEVRLKPWLDPSA 400
            +AG V ET++F+R ++PD+RI+++   +D   +D++E +          V+LKPWLDP A
Sbjct: 287  EAGFVHETDEFLRGMLPDERIKNVGFCVDSSDDDDDENNHSSDDAGVDGVQLKPWLDPRA 346

Query: 399  LASALSDWNPDDVSALEDANIVWTTRLVCKMLRSFKKVETAWKFFLWVAYQPGEFTHDIY 220
            LA+AL++W+P++V ALE+A  +WTTRLVCK+LR+F   ETAWKFF WVAYQPG F H+IY
Sbjct: 347  LANALNNWDPNEVLALEEAKFIWTTRLVCKILRNFNSPETAWKFFCWVAYQPGGFNHNIY 406

Query: 219  TLSRMIAILARHGSVDLVDQLISKVKSERIRLSFSTVRLIIDFYGISKEPDAALRVFYDV 40
            T+ RM+ +LARHG V+LV++L+ K++ E IRL  ST+RLIIDFYGIS+  DAAL+VF+D 
Sbjct: 407  TVQRMMTLLARHGHVELVEKLLLKIRREEIRLPVSTIRLIIDFYGISRNADAALKVFHDA 466

Query: 39   ESISGAMPKAHL 4
            ES+ G M K +L
Sbjct: 467  ESLCGPMSKLYL 478


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66631-like
            [Glycine max]
          Length = 658

 Score =  345 bits (885), Expect = 9e-93
 Identities = 173/318 (54%), Positives = 229/318 (72%), Gaps = 7/318 (2%)
 Frame = -1

Query: 936  HPCTESYNIILSLYKQKGKNLEAAELFSRMINEGANPNSRTYTVVIEHLASLGKLDAAKE 757
            H CTESYNI+++LY Q GK+ EA  +F RMI+EG+ PN R+YTV+IEHL    KL  A E
Sbjct: 175  HLCTESYNIVMTLYAQMGKDFEAVRVFRRMIDEGSLPNCRSYTVIIEHLVKSRKLSEALE 234

Query: 756  VFEILPSMRIKHTVKQYSILAMGFCSVERFDLVKELVREMHLDGMLPNQSMRMSLKCLLD 577
            VF +LPSMRIK T++QYS+L  GF   ++FD V+ LV EM +DG+LP++ M + L+ + +
Sbjct: 235  VFNLLPSMRIKRTLRQYSVLLEGFVGSKQFDEVRILVEEMQVDGILPSRGMGLLLQQMKE 294

Query: 576  AGLVEETEDFVRELMPDKRIESIRVSMDCGYED-NEEEDVDGSLVDEYE------VRLKP 418
             G++E  E  +R ++PD+ I S+  S+D G ED NE ED D ++ D  +      + LKP
Sbjct: 295  EGILEGKEQLLRGILPDETIRSVSYSIDSGDEDENENEDQDENISDAGQCNHVDGIHLKP 354

Query: 417  WLDPSALASALSDWNPDDVSALEDANIVWTTRLVCKMLRSFKKVETAWKFFLWVAYQPGE 238
            W+DP AL SAL +W+PD+V+ALE AN VWTTRLVCKMLR+FK  E AW FF W A Q G 
Sbjct: 355  WMDPRALVSALRNWSPDEVAALESANFVWTTRLVCKMLRNFKTPEAAWSFFCWAANQRG- 413

Query: 237  FTHDIYTLSRMIAILARHGSVDLVDQLISKVKSERIRLSFSTVRLIIDFYGISKEPDAAL 58
            FTHDIYT+ R+  +LARHG  DLVD+LISK++ ER+RL FST+R+IIDFYGISK+ DAAL
Sbjct: 414  FTHDIYTVQRITTLLARHGRTDLVDRLISKIRMERMRLPFSTIRMIIDFYGISKKADAAL 473

Query: 57   RVFYDVESISGAMPKAHL 4
            +VF D   + G +   +L
Sbjct: 474  KVFNDDRILCGPISNVNL 491


>ref|XP_002866749.1| hypothetical protein ARALYDRAFT_920064 [Arabidopsis lyrata subsp.
            lyrata] gi|297312584|gb|EFH43008.1| hypothetical protein
            ARALYDRAFT_920064 [Arabidopsis lyrata subsp. lyrata]
          Length = 661

 Score =  339 bits (870), Expect = 5e-91
 Identities = 169/314 (53%), Positives = 227/314 (72%), Gaps = 1/314 (0%)
 Frame = -1

Query: 942  QKHPCTESYNIILSLYKQKGKNLEAAELFSRMINEGANPNSRTYTVVIEHLASLGKLDAA 763
            +K  CTESYNI++ +Y   GK+ EA + F ++ N+G  PNSRT+T++IEHL  LG LDAA
Sbjct: 172  EKKGCTESYNIVMQVYMTLGKDSEAVQTFDQITNQGGIPNSRTFTIMIEHLVKLGNLDAA 231

Query: 762  KEVFEILPSMRIKHTVKQYSILAMGFCSVERFDLVKELVREMHLDGMLPNQSMRMSLKCL 583
             +VFE LP MRI  T+K YS+L   F + +RF  VK L+ EM  DG  P++ M   LK +
Sbjct: 232  MKVFETLPLMRITRTLKHYSVLVEAFVNAQRFGEVKTLLAEMKADGKFPSRRMLEPLKLM 291

Query: 582  LDAGLVEETEDFVRELMPDKRIESIRV-SMDCGYEDNEEEDVDGSLVDEYEVRLKPWLDP 406
             +AG  +ETE+F+RE++PD+RI+ I + SMD   +  EE D     V+E +V+LKPWLDP
Sbjct: 292  REAGFEQETEEFLREMLPDERIKDISIYSMDNPSDSEEEGDEHNDNVNEGQVKLKPWLDP 351

Query: 405  SALASALSDWNPDDVSALEDANIVWTTRLVCKMLRSFKKVETAWKFFLWVAYQPGEFTHD 226
             ALA++L  W+ D V+ALE+AN VWT  LVCKMLR+F+  ETAW FF WVA QPG FTHD
Sbjct: 352  KALATSLKKWSSDAVTALEEANFVWTNLLVCKMLRNFRSPETAWSFFCWVAIQPG-FTHD 410

Query: 225  IYTLSRMIAILARHGSVDLVDQLISKVKSERIRLSFSTVRLIIDFYGISKEPDAALRVFY 46
             YT+ RM+A+LAR+G V+LVD+LISKV+ E I+L FST+RLIID YGISK+PDAA++VF 
Sbjct: 411  AYTIERMMAMLARNGQVELVDKLISKVRMEGIKLPFSTIRLIIDLYGISKKPDAAIKVFR 470

Query: 45   DVESISGAMPKAHL 4
               ++ G++   +L
Sbjct: 471  QDRTLCGSISDFNL 484