BLASTX nr result

ID: Cimicifuga21_contig00020338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020338
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299580.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002275095.2| PREDICTED: uncharacterized protein LOC100242...    82   6e-14
emb|CBI34799.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_003561135.1| PREDICTED: uncharacterized protein LOC100828...    60   2e-07
ref|NP_201030.2| Cell cycle regulated microtubule associated pro...    55   6e-06

>ref|XP_002299580.1| predicted protein [Populus trichocarpa] gi|222846838|gb|EEE84385.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 58/128 (45%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
 Frame = +3

Query: 3   EAESWFSTASTYPPSPFVLKVSLGGDASLENVNTSPKPKV----ATHAXXXXXXXXSDIE 170
           E + WF TA + PPSPFV K      + LENVNTSPK K     A           S IE
Sbjct: 44  EVQRWFDTAPSCPPSPFVAKFVY---SLLENVNTSPKSKDEENRAPLLNDDMGPEVSAIE 100

Query: 171 GNCKGLTFYNHMAQDIRHPKLKHAIKTTLLKGSTLMKPTASQLAKQSQRGFHGTSR---L 341
            +  GLTFY+  + D  +PK+K  +K T  + STLMKPTASQLAKQ+     G SR   L
Sbjct: 101 VDDTGLTFYHQKSTDKSNPKVKSMVKPTFPRSSTLMKPTASQLAKQNHPTQIGVSRFQIL 160

Query: 342 LERPQTSL 365
           L + + SL
Sbjct: 161 LGQKERSL 168


>ref|XP_002275095.2| PREDICTED: uncharacterized protein LOC100242735 [Vitis vinifera]
          Length = 521

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/137 (37%), Positives = 63/137 (45%), Gaps = 33/137 (24%)
 Frame = +3

Query: 3   EAESWFSTASTYPPSPFVLKVSLGGDASLENVNTSPKPK--------------------- 119
           +AE WF +A +YPPSPFV K+ L  D  L NVNTSPK K                     
Sbjct: 46  QAELWFESAKSYPPSPFVAKLVLREDILLGNVNTSPKSKDMEIAVVPDSDSAVALGQEIF 105

Query: 120 ------------VATHAXXXXXXXXSDIEGNCKGLTFYNHMAQDIRHPKLKHAIKTTLLK 263
                       +            S  + +  GL FYNHM  D    K K  +K+ L +
Sbjct: 106 TTDANNRDCGGTITNLQSGYLQNVHSQAQESISGLIFYNHMLNDNPKAKTKSTVKSVLPR 165

Query: 264 GSTLMKPTASQLAKQSQ 314
            STLMKPTASQLAKQ++
Sbjct: 166 SSTLMKPTASQLAKQNR 182


>emb|CBI34799.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/137 (37%), Positives = 63/137 (45%), Gaps = 33/137 (24%)
 Frame = +3

Query: 3   EAESWFSTASTYPPSPFVLKVSLGGDASLENVNTSPKPK--------------------- 119
           +AE WF +A +YPPSPFV K+ L  D  L NVNTSPK K                     
Sbjct: 43  QAELWFESAKSYPPSPFVAKLVLREDILLGNVNTSPKSKDMEIAVVPDSDSAVALGQEIF 102

Query: 120 ------------VATHAXXXXXXXXSDIEGNCKGLTFYNHMAQDIRHPKLKHAIKTTLLK 263
                       +            S  + +  GL FYNHM  D    K K  +K+ L +
Sbjct: 103 TTDANNRDCGGTITNLQSGYLQNVHSQAQESISGLIFYNHMLNDNPKAKTKSTVKSVLPR 162

Query: 264 GSTLMKPTASQLAKQSQ 314
            STLMKPTASQLAKQ++
Sbjct: 163 SSTLMKPTASQLAKQNR 179


>ref|XP_003561135.1| PREDICTED: uncharacterized protein LOC100828451 [Brachypodium
           distachyon]
          Length = 452

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
 Frame = +3

Query: 6   AESWFSTASTYPPSPFVLKVSLGGDASLENVNTSPKPKV-ATHAXXXXXXXXSDIEGNC- 179
           AE WF+ A +YPPSP +  + L  D  L N+ T   P + A H            + +  
Sbjct: 76  AEMWFANAPSYPPSPLIAMM-LAEDLGLPNLRTISGPDIDAVHCSKSLQGCSVAAQQSTY 134

Query: 180 ------KGLTFYNHMAQDIRHPKLKHAIKTTLLKGSTLMKPTASQLAKQSQR 317
                 +G T    +++  R P  +  +K   LKGSTLMKPTASQLA+Q+++
Sbjct: 135 RSHAPNEGRTPCYGLSEIERKPGTRSIVKANFLKGSTLMKPTASQLARQNRQ 186


>ref|NP_201030.2| Cell cycle regulated microtubule associated protein [Arabidopsis
           thaliana] gi|52354587|gb|AAU44614.1| hypothetical
           protein AT5G62240 [Arabidopsis thaliana]
           gi|60547977|gb|AAX23952.1| hypothetical protein
           At5g62240 [Arabidopsis thaliana]
           gi|332010202|gb|AED97585.1| Cell cycle regulated
           microtubule associated protein [Arabidopsis thaliana]
          Length = 377

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/121 (31%), Positives = 56/121 (46%)
 Frame = +3

Query: 3   EAESWFSTASTYPPSPFVLKVSLGGDASLENVNTSPKPKVATHAXXXXXXXXSDIEGNCK 182
           E E WF ++  YPPSPF  K +   +   +  NT  + K              + +    
Sbjct: 44  EIEIWFQSSGNYPPSPFSPKFNWKFEPFKQITNTISESKPVEIIESSEAETGLNCKDKFN 103

Query: 183 GLTFYNHMAQDIRHPKLKHAIKTTLLKGSTLMKPTASQLAKQSQRGFHGTSRLLERPQTS 362
           G  +YN   +D+   K K   KT+    STL +PTAS LA+Q++     + +LL R Q S
Sbjct: 104 GFIYYNQTVKDVSKKKSKSKTKTS---NSTLTRPTASLLARQNKPLDIYSVQLLTRCQRS 160

Query: 363 L 365
           L
Sbjct: 161 L 161


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