BLASTX nr result

ID: Cimicifuga21_contig00020335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020335
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts...   124   8e-27
ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts...   124   1e-26
emb|CBI31526.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...   122   2e-26
ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [S...   122   2e-26

>ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts 2-like [Cucumis
           sativus]
          Length = 1195

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/72 (81%), Positives = 69/72 (95%)
 Frame = -2

Query: 216 DIQAAVQICSLLHQKYKDFSSTLIQCLLKVFFPGKSGDDLDSDRNLKAMKKRSTLRLIME 37
           DIQAAVQICSLLHQ+YKDFS  LIQ LLKVFFPGKSGD+LD+DRNLKAMKKRSTL+L+ME
Sbjct: 112 DIQAAVQICSLLHQRYKDFSPCLIQGLLKVFFPGKSGDELDADRNLKAMKKRSTLKLLME 171

Query: 36  LYFVGVIEDASV 1
           L+FVGV+ED+++
Sbjct: 172 LFFVGVVEDSAI 183


>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis
           vinifera]
          Length = 1222

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = -2

Query: 216 DIQAAVQICSLLHQKYKDFSSTLIQCLLKVFFPGKSGDDLDSDRNLKAMKKRSTLRLIME 37
           DIQAAVQICSLLHQ+YKDFS +LIQ LLKVFFPGKSGD+LD DRNLKAMKKRSTL+L++E
Sbjct: 141 DIQAAVQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLE 200

Query: 36  LYFVGVIEDASV 1
           LYFVGV+ED+ +
Sbjct: 201 LYFVGVVEDSGI 212


>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = -2

Query: 216 DIQAAVQICSLLHQKYKDFSSTLIQCLLKVFFPGKSGDDLDSDRNLKAMKKRSTLRLIME 37
           DIQAAVQICSLLHQ+YKDFS +LIQ LLKVFFPGKSGD+LD DRNLKAMKKRSTL+L++E
Sbjct: 112 DIQAAVQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLE 171

Query: 36  LYFVGVIEDASV 1
           LYFVGV+ED+ +
Sbjct: 172 LYFVGVVEDSGI 183


>ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
           2-like, partial [Cucumis sativus]
          Length = 1144

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = -2

Query: 216 DIQAAVQICSLLHQKYKDFSSTLIQCLLKVFFPGKSGDDLDSDRNLKAMKKRSTLRLIME 37
           DIQAAVQICSLLHQ+YKDFS  LIQ LLKVFFPGKSGD+LD+DRNLKAMKKRSTL+L+ME
Sbjct: 61  DIQAAVQICSLLHQRYKDFSPCLIQGLLKVFFPGKSGDELDADRNLKAMKKRSTLKLLME 120

Query: 36  LYFVGVIEDASV 1
           L FVGV+ED+++
Sbjct: 121 LXFVGVVEDSAI 132


>ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [Sorghum bicolor]
           gi|241934042|gb|EES07187.1| hypothetical protein
           SORBIDRAFT_04g026740 [Sorghum bicolor]
          Length = 1193

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/72 (79%), Positives = 68/72 (94%)
 Frame = -2

Query: 216 DIQAAVQICSLLHQKYKDFSSTLIQCLLKVFFPGKSGDDLDSDRNLKAMKKRSTLRLIME 37
           DIQAAVQ+CSLLHQ+YKDFS  LIQ LLKVFFPGKSGDDLD+D+N +AMKKRSTL+L++E
Sbjct: 115 DIQAAVQVCSLLHQRYKDFSPCLIQGLLKVFFPGKSGDDLDADKNSRAMKKRSTLKLLIE 174

Query: 36  LYFVGVIEDASV 1
           LYFVG++EDAS+
Sbjct: 175 LYFVGIVEDASI 186


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