BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020308
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32274.3| unnamed protein product [Vitis vinifera]              172   5e-41
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...   172   5e-41
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...   162   3e-38
ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2...   158   6e-37
gb|AEO33599.1| hypothetical protein [Amblyomma maculatum]             158   8e-37

>emb|CBI32274.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  172 bits (435), Expect = 5e-41
 Identities = 88/127 (69%), Positives = 96/127 (75%), Gaps = 9/127 (7%)
 Frame = -3

Query: 354 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQRIKEHLGQ 175
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR           QSLIDQRIKEHLGQ
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 174 TAVYQQVGAAYNQHLASF---PQRPRLPVLPMQGL-----GQMPINSPVL-GIRPLVLPR 22
           TA +QQVGAAYNQHL SF   P RPRLPVLP  G+       +P+NSP++ G+RP VLPR
Sbjct: 61  TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120

Query: 21  PISTVPG 1
           P+   PG
Sbjct: 121 PVPGAPG 127


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score =  172 bits (435), Expect = 5e-41
 Identities = 88/127 (69%), Positives = 96/127 (75%), Gaps = 9/127 (7%)
 Frame = -3

Query: 354 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQRIKEHLGQ 175
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR           QSLIDQRIKEHLGQ
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 174 TAVYQQVGAAYNQHLASF---PQRPRLPVLPMQGL-----GQMPINSPVL-GIRPLVLPR 22
           TA +QQVGAAYNQHL SF   P RPRLPVLP  G+       +P+NSP++ G+RP VLPR
Sbjct: 61  TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120

Query: 21  PISTVPG 1
           P+   PG
Sbjct: 121 PVPGAPG 127


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score =  162 bits (411), Expect = 3e-38
 Identities = 86/125 (68%), Positives = 93/125 (74%), Gaps = 7/125 (5%)
 Frame = -3

Query: 354 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQRIKEHLGQ 175
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR           QSLIDQRIKEHLGQ
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 174 TAVYQQVGAAYNQHLASFPQRPRLPVL-----PMQGLGQMPINSPVL-GIR-PLVLPRPI 16
            A +QQVGAAYNQHL    QRPRLPVL     P+ G  Q+P N+P++ GIR P VLPRP+
Sbjct: 61  AAAFQQVGAAYNQHLL---QRPRLPVLPTPMMPIPGSAQLPANTPLMPGIRPPPVLPRPV 117

Query: 15  STVPG 1
              PG
Sbjct: 118 PAAPG 122


>ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  158 bits (400), Expect = 6e-37
 Identities = 82/119 (68%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQRIKEHLGQ 175
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR           QS+IDQRIKEHLGQ
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60

Query: 174 TAVYQQVGAAYNQHLASFPQRPRLPVLPMQGLGQMPINSPVL-GIRPLVLPRPISTVPG 1
           TA +QQVGAAYNQHL    QRPRLPVLP   +     N+P+  G+RP VLPRP+   PG
Sbjct: 61  TAAFQQVGAAYNQHL--MVQRPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPG 117


>gb|AEO33599.1| hypothetical protein [Amblyomma maculatum]
          Length = 254

 Score =  158 bits (399), Expect = 8e-37
 Identities = 85/141 (60%), Positives = 94/141 (66%), Gaps = 8/141 (5%)
 Frame = -3

Query: 399 TSGFVGVSRSFWPPNMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXX 220
           T    G+    +   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR          
Sbjct: 48  TISAAGLRPYIYQIKMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQ 107

Query: 219 XQSLIDQRIKEHLGQTAVYQQVGAAYNQHLASF---PQRPRLPVL-----PMQGLGQMPI 64
            QSLIDQRIKEHLGQ A + QVGA +NQHL S    PQRPRLP+L     PM    Q PI
Sbjct: 108 TQSLIDQRIKEHLGQAAAFHQVGATFNQHLMSLQGNPQRPRLPILAPPIFPMGASPQGPI 167

Query: 63  NSPVLGIRPLVLPRPISTVPG 1
            S + G+RP VLP P++ VPG
Sbjct: 168 PSLLPGMRPPVLPVPMAGVPG 188