BLASTX nr result

ID: Cimicifuga21_contig00020307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020307
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547844.1| PREDICTED: probable leucine-rich repeat rece...   154   5e-36
ref|XP_003530535.1| PREDICTED: probable leucine-rich repeat rece...   154   9e-36
ref|XP_002323702.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002326254.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|NP_178080.2| leucine-rich repeat protein kinase-like protein...   151   6e-35

>ref|XP_003547844.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At5g49770-like [Glycine max]
          Length = 967

 Score =  154 bits (390), Expect = 5e-36
 Identities = 72/109 (66%), Positives = 83/109 (76%)
 Frame = -2

Query: 329 LILKGNPICDGDLLNTHYCQLQQNLAKPYSTSLERCGSKTCISNRKLNPQSCDCDVPYEG 150
           LIL GNP+C   L NT++CQLQQ   +PYSTSL  CG K+C  ++KL+PQSC+C  PYEG
Sbjct: 386 LILIGNPVCGTALSNTNFCQLQQQAKQPYSTSLASCGGKSCPPDQKLSPQSCECAYPYEG 445

Query: 149 ILYFRAPFFRDTSNDTVFHELEMKLWRKLGLTPGSVSLQNIFFNSDDYL 3
            LYFR P FR+ S+   FH LEM LW KLGLTPGSVSLQN FFNSDDYL
Sbjct: 446 TLYFRGPSFRELSSVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYL 494


>ref|XP_003530535.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At5g49770-like [Glycine max]
          Length = 969

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/110 (66%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = -2

Query: 329 LILKGNPICDGDLL-NTHYCQLQQNLAKPYSTSLERCGSKTCISNRKLNPQSCDCDVPYE 153
           LIL GNP+C G  L NT+YCQLQQ   +PYSTSL  CG K+C  ++KL+PQSC+C  PY 
Sbjct: 386 LILIGNPVCSGSALSNTNYCQLQQQAKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYV 445

Query: 152 GILYFRAPFFRDTSNDTVFHELEMKLWRKLGLTPGSVSLQNIFFNSDDYL 3
           G LYFR P FR+ S+   FH LEM LW KLGLTPGSVSLQN FFNSDDYL
Sbjct: 446 GTLYFRGPSFRELSSVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYL 495


>ref|XP_002323702.1| predicted protein [Populus trichocarpa] gi|222868332|gb|EEF05463.1|
           predicted protein [Populus trichocarpa]
          Length = 946

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/109 (67%), Positives = 82/109 (75%)
 Frame = -2

Query: 329 LILKGNPICDGDLLNTHYCQLQQNLAKPYSTSLERCGSKTCISNRKLNPQSCDCDVPYEG 150
           LIL GNP+C   L +T+YCQLQQ   KPYSTSL  CGSK C   +KL+PQSC+C  PYEG
Sbjct: 358 LILVGNPVCTA-LSDTNYCQLQQQSTKPYSTSLANCGSKMCPPEQKLSPQSCECAYPYEG 416

Query: 149 ILYFRAPFFRDTSNDTVFHELEMKLWRKLGLTPGSVSLQNIFFNSDDYL 3
            LYFRAP FR+ SN  +FH LEM LW KLGLTPGSV LQN FFN DDYL
Sbjct: 417 TLYFRAPSFRELSNVNMFHSLEMSLWGKLGLTPGSVFLQNPFFNVDDYL 465


>ref|XP_002326254.1| predicted protein [Populus trichocarpa] gi|222833447|gb|EEE71924.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/109 (67%), Positives = 80/109 (73%)
 Frame = -2

Query: 329 LILKGNPICDGDLLNTHYCQLQQNLAKPYSTSLERCGSKTCISNRKLNPQSCDCDVPYEG 150
           LIL GNP+C   L NT YCQLQQ   KPYSTSL  CGSK C   +KL+PQSC+C  PYEG
Sbjct: 390 LILVGNPVCIA-LSNTSYCQLQQQSTKPYSTSLANCGSKLCPIEQKLSPQSCECAYPYEG 448

Query: 149 ILYFRAPFFRDTSNDTVFHELEMKLWRKLGLTPGSVSLQNIFFNSDDYL 3
            LYFR P FR+ SND  FH LEM LW +LGLTPGSV LQN FFN DDYL
Sbjct: 449 TLYFRGPSFRELSNDNTFHSLEMSLWDQLGLTPGSVFLQNPFFNVDDYL 497


>ref|NP_178080.2| leucine-rich repeat protein kinase-like protein [Arabidopsis
           thaliana] gi|26450791|dbj|BAC42504.1| unknown protein
           [Arabidopsis thaliana] gi|224589491|gb|ACN59279.1|
           leucine-rich repeat receptor-like protein kinase
           [Arabidopsis thaliana] gi|332198152|gb|AEE36273.1|
           leucine-rich repeat protein kinase-like protein
           [Arabidopsis thaliana]
          Length = 971

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/110 (64%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = -2

Query: 329 LILKGNPICDGDLLNTHYCQLQQNLAKP-YSTSLERCGSKTCISNRKLNPQSCDCDVPYE 153
           LIL+GNP+C   L NT+YCQ+QQ   K  YSTSL  CG K+C  ++K++PQSC+C  PYE
Sbjct: 394 LILEGNPVCTTALSNTNYCQIQQQQVKRIYSTSLANCGGKSCPLDQKVSPQSCECAYPYE 453

Query: 152 GILYFRAPFFRDTSNDTVFHELEMKLWRKLGLTPGSVSLQNIFFNSDDYL 3
           G LYFR P FRD SN   +H LEM LW KLGLTPGSVSLQN FFN+DDYL
Sbjct: 454 GTLYFRGPMFRDLSNVNTYHSLEMSLWVKLGLTPGSVSLQNPFFNNDDYL 503


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