BLASTX nr result
ID: Cimicifuga21_contig00020294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00020294
(585 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 155 1e-67
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 150 3e-64
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 147 2e-63
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 147 2e-62
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 144 5e-62
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 155 bits (392), Expect(2) = 1e-67
Identities = 71/102 (69%), Positives = 86/102 (84%)
Frame = +2
Query: 278 QEVPSMVERETGKKLKCVRSDNGGEYIGPFEEYCKQFGIRHEQTVPKTPQQNGVAERMNR 457
+E +VER++GKKLKC+R+DNGGEY GPF+ YCKQ GIRHE+T PKTPQ NG+AERMNR
Sbjct: 523 KEFHVLVERQSGKKLKCIRTDNGGEYCGPFDAYCKQHGIRHEKTPPKTPQLNGLAERMNR 582
Query: 458 TIVERMRCMLSHAKLSRSYWGEALRTAVHVINRSPSKPLNGE 583
T++ER+RCMLS AKL + +WGEAL TAVHVIN SP+ LN E
Sbjct: 583 TLIERVRCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNAE 624
Score = 127 bits (318), Expect(2) = 1e-67
Identities = 57/95 (60%), Positives = 71/95 (74%)
Frame = +3
Query: 6 LVKRNVFPKVKGTHLNKCSHCMLGKQTRFAFQRPPSRRKEEVLELVHTDVCGPMKKKTHG 185
L K++V +K L KCSHCM GKQTR +F++ P +K E+LELVH+DVCGP+K K+
Sbjct: 432 LAKKDVLSGLKNAELEKCSHCMAGKQTRVSFKKHPPSKKSELLELVHSDVCGPLKVKSFT 491
Query: 186 GASYFVTFIDDSSRKVWAYGLKTKDEVLGVFKKFH 290
G YFVTFIDD SRK+W Y LKTKD+VL FK+FH
Sbjct: 492 GTIYFVTFIDDCSRKLWVYALKTKDQVLAKFKEFH 526
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 150 bits (378), Expect(2) = 3e-64
Identities = 68/105 (64%), Positives = 85/105 (80%)
Frame = +2
Query: 269 GCVQEVPSMVERETGKKLKCVRSDNGGEYIGPFEEYCKQFGIRHEQTVPKTPQQNGVAER 448
G +E ++VER+TGKKLKC+R+DNGGEY GPF+EYC+++GIRH++T PK PQ NG+AER
Sbjct: 523 GVFKEFHALVERQTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAER 582
Query: 449 MNRTIVERMRCMLSHAKLSRSYWGEALRTAVHVINRSPSKPLNGE 583
MNRTI+ER+RCML AKL S+W EA+ TAVHVIN SP L E
Sbjct: 583 MNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKNE 627
Score = 120 bits (302), Expect(2) = 3e-64
Identities = 56/95 (58%), Positives = 69/95 (72%)
Frame = +3
Query: 6 LVKRNVFPKVKGTHLNKCSHCMLGKQTRFAFQRPPSRRKEEVLELVHTDVCGPMKKKTHG 185
L K++ VK L+KC HC+ GKQ R +F P RK E L+L+H+DVCGPMK ++ G
Sbjct: 435 LAKKSKLSGVKEAKLDKCVHCLAGKQRRVSFMSHPPTRKSEPLDLIHSDVCGPMKVRSLG 494
Query: 186 GASYFVTFIDDSSRKVWAYGLKTKDEVLGVFKKFH 290
GASYFVTFIDD SRK+W Y LK K +VLGVFK+FH
Sbjct: 495 GASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFH 529
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 147 bits (370), Expect(2) = 2e-63
Identities = 63/95 (66%), Positives = 83/95 (87%)
Frame = +2
Query: 290 SMVERETGKKLKCVRSDNGGEYIGPFEEYCKQFGIRHEQTVPKTPQQNGVAERMNRTIVE 469
++VER++G+KLKC+R+DNGGEY PF+EYC+Q GIRH++T PKTPQ NG+AERMNRT+VE
Sbjct: 415 ALVERQSGEKLKCIRTDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVE 474
Query: 470 RMRCMLSHAKLSRSYWGEALRTAVHVINRSPSKPL 574
R+RC+LS ++L RS+WGEAL T VHV+N +P PL
Sbjct: 475 RVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPL 509
Score = 121 bits (304), Expect(2) = 2e-63
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +3
Query: 3 VLVKRNVFPKVKGTHLNKCSHCMLGKQTRFAFQRPPSRRKEEVLELVHTDVCGPMKKKTH 182
+L K+N+ +K L +C+HC+ GKQTR AF+ RK +L+LV++DVCGPMK KT
Sbjct: 319 ILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSDVCGPMKTKTL 378
Query: 183 GGASYFVTFIDDSSRKVWAYGLKTKDEVLGVFKKFH 290
GG+ YFVTFIDD SRK+W Y LKTKD+VL VFK+FH
Sbjct: 379 GGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFH 414
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 147 bits (371), Expect(2) = 2e-62
Identities = 63/95 (66%), Positives = 83/95 (87%)
Frame = +2
Query: 290 SMVERETGKKLKCVRSDNGGEYIGPFEEYCKQFGIRHEQTVPKTPQQNGVAERMNRTIVE 469
++VER++G+KLKC+R+DNGGEY GPF+EYC+Q G RH++T PKTPQ NG+AERMNRT+VE
Sbjct: 512 ALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGFRHQKTPPKTPQLNGLAERMNRTLVE 571
Query: 470 RMRCMLSHAKLSRSYWGEALRTAVHVINRSPSKPL 574
R+RC+LS ++L RS+WGEAL T VHV+N +P PL
Sbjct: 572 RVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPL 606
Score = 117 bits (294), Expect(2) = 2e-62
Identities = 55/96 (57%), Positives = 71/96 (73%)
Frame = +3
Query: 3 VLVKRNVFPKVKGTHLNKCSHCMLGKQTRFAFQRPPSRRKEEVLELVHTDVCGPMKKKTH 182
+L K+N+ +K L +C+HC+ GKQTR AF+ RK +L+LV++DV GPMK KT
Sbjct: 416 ILAKKNLLXGMKKGSLKRCAHCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVYGPMKTKTL 475
Query: 183 GGASYFVTFIDDSSRKVWAYGLKTKDEVLGVFKKFH 290
GG+ YFVTFIDD SRK+W Y LKTKD+VL VFK+FH
Sbjct: 476 GGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFH 511
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 144 bits (362), Expect(2) = 5e-62
Identities = 62/95 (65%), Positives = 82/95 (86%)
Frame = +2
Query: 290 SMVERETGKKLKCVRSDNGGEYIGPFEEYCKQFGIRHEQTVPKTPQQNGVAERMNRTIVE 469
++VER++G+KLKC+R+DNGGEY GPF+EYC+Q IRH++T PKTPQ NG+AERMNRT+VE
Sbjct: 483 ALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHDIRHQKTPPKTPQLNGLAERMNRTLVE 542
Query: 470 RMRCMLSHAKLSRSYWGEALRTAVHVINRSPSKPL 574
R+RC+LS ++L RS+W EAL T VHV+N +P PL
Sbjct: 543 RVRCLLSQSQLPRSFWDEALNTVVHVLNLTPCVPL 577
Score = 119 bits (299), Expect(2) = 5e-62
Identities = 55/96 (57%), Positives = 70/96 (72%)
Frame = +3
Query: 3 VLVKRNVFPKVKGTHLNKCSHCMLGKQTRFAFQRPPSRRKEEVLELVHTDVCGPMKKKTH 182
+L K N+ +K L +C+HC+ GKQTR AF+ RK + +LV++DVCGPMK KT
Sbjct: 387 ILAKNNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMFDLVYSDVCGPMKTKTL 446
Query: 183 GGASYFVTFIDDSSRKVWAYGLKTKDEVLGVFKKFH 290
GG+ YFVTFIDD SRK+W Y LKTKD+VL VFK+FH
Sbjct: 447 GGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFH 482