BLASTX nr result

ID: Cimicifuga21_contig00020293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020293
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV4...    60   2e-07
ref|XP_003570049.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...    59   3e-07
dbj|BAG12806.1| argonaute1 [Daucus carota]                             59   4e-07
gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]                 59   5e-07
ref|XP_003634638.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...    59   5e-07

>gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV46190.1|
           argonaute1-1, partial [Solanum lycopersicum]
          Length = 1054

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = -3

Query: 229 ISHRSDVSSTAFIEPLPVLEFVSQLLNKNVTQRLLSDADCVKV 101
           +S   D+SSTAFIEPLPV+EFVSQLLN++++ R LSDAD VK+
Sbjct: 375 LSLNIDMSSTAFIEPLPVIEFVSQLLNRDISSRPLSDADRVKI 417


>ref|XP_003570049.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 1A-like
           [Brachypodium distachyon]
          Length = 1076

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = -3

Query: 229 ISHRSDVSSTAFIEPLPVLEFVSQLLNKNVTQRLLSDADCVKV 101
           +S   D+SSTAFIEPLPV++FV+QLLN+NV+ R LSDAD VK+
Sbjct: 399 LSLNIDMSSTAFIEPLPVIDFVAQLLNRNVSVRPLSDADRVKI 441


>dbj|BAG12806.1| argonaute1 [Daucus carota]
          Length = 1107

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/43 (67%), Positives = 36/43 (83%)
 Frame = -3

Query: 229 ISHRSDVSSTAFIEPLPVLEFVSQLLNKNVTQRLLSDADCVKV 101
           +S   D+SSTAFIEPLPV++FVSQLLN++V  R LSDAD VK+
Sbjct: 434 LSLNIDMSSTAFIEPLPVIDFVSQLLNRDVWSRALSDADRVKI 476


>gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]
          Length = 1052

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = -3

Query: 229 ISHRSDVSSTAFIEPLPVLEFVSQLLNKNVTQRLLSDADCVKV 101
           +S   D+SSTAFIEPLP+++FVSQLLN++++ R LSDAD VK+
Sbjct: 373 LSLNIDMSSTAFIEPLPIIDFVSQLLNRDISSRPLSDADRVKI 415


>ref|XP_003634638.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 1B-like [Vitis
           vinifera]
          Length = 867

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = -3

Query: 229 ISHRSDVSSTAFIEPLPVLEFVSQLLNKNVTQRLLSDADCVKV 101
           +S   D+SSTAFIEPLPV++FV+QLLN++V+ R LSDAD VKV
Sbjct: 185 LSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSDADRVKV 227


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