BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020290
         (1515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...   258   4e-66
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...   253   9e-65
ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...   248   2e-63
ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|2...   240   8e-61
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...   233   1e-58

>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
            [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            39-like [Cucumis sativus]
          Length = 347

 Score =  258 bits (658), Expect = 4e-66
 Identities = 146/326 (44%), Positives = 190/326 (58%), Gaps = 26/326 (7%)
 Frame = -3

Query: 1321 GFWPEMPIDNDQSRMAPGPEF----PPFKKPRNFDDNLSIXXXXXXXXXXXXXPA----- 1169
            G W + P ++      P  +F    PP+K+ RN ++N S                     
Sbjct: 26   GCWSQFPRNDP---FDPQSQFEVQQPPYKRARNSEENPSSPISYSNPSLNSRGQPPNAPV 82

Query: 1168 -RGVSKIFFKTRPCEKFREGTCPYGSNCNFAHGIEDIRKPPPNWQEIVGFHEDDRA-EKW 995
             +G+S IFFKTR C KF+ G C  G++CNFAHG+ED+R+PPPNWQEIVG  EDD++   W
Sbjct: 83   NKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVNNW 142

Query: 994  DDDLKIITRHRLCKSFCAGKVCPYGKRCNYLHEDLGKYREEYGRCRESSAISISTTGVPV 815
            +DD KII + +LC+ F  G+ CPYG RCN+LHED  K+R++ GR RESSAISI TTG P+
Sbjct: 143  NDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPL 202

Query: 814  DTGARSEQ------------SDSIIA-VNSRPA-WKTKMCNKWWEASGNCPFGDKCHFAH 677
              G  S              SD++ A  N RP+ WKTK+C K WE +G+CPFGDKCHFAH
Sbjct: 203  MNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTK-WEITGHCPFGDKCHFAH 261

Query: 676  GLAELKKFGGQNEVEMXXXXXXXXXXXXXXXXXASLKNTVAGGSCKKPGLSK-FLAKWKS 500
            G +EL+ + G+ E E+                 +SL   V   S    G  K  L KWK 
Sbjct: 262  GQSELQLYIGR-EGEVSTAALNVKPLIVAMEASSSLTTNVVPSSALPEGQEKPSLLKWKG 320

Query: 499  PKKINRIYADWIDDTSPTKSSPSELE 422
            PKKINRIYADW+DD   + SS S++E
Sbjct: 321  PKKINRIYADWLDDLPLSPSSTSKME 346


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  253 bits (646), Expect = 9e-65
 Identities = 141/318 (44%), Positives = 182/318 (57%), Gaps = 25/318 (7%)
 Frame = -3

Query: 1336 GNHTVGFWPEMPIDNDQSRMAPGPEFPPFKKPRNFDDNLSIXXXXXXXXXXXXXPARGVS 1157
            G+  +G WP+  ++N +         PP+K+PRN +DN +                +G +
Sbjct: 20   GSDAIGVWPQFVMNNIEQFEH---HQPPYKRPRNSEDNPNQSVNSRTPPTNNLPVHKGAT 76

Query: 1156 KIFFKTRPCEKFREGTCPYGSNCNFAHGIEDIRKPPPNWQEIVGFH---EDDR--AEKWD 992
             IFFKTR C KF+ GTC  G NCNFAHG++D+R+PPPNW+E+VG     E+DR  A  W+
Sbjct: 77   NIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQPPPNWKELVGVSVSSEEDRSTATNWE 136

Query: 991  DDLKIITRHRLCKSFCAGKVCPYGKRCNYLHEDLGKYREEYGRCRESSAISISTTG---- 824
            DD +II + +LCK F  G+ CPYG RCN+LHED  K+RE+ GR RESSAISI TTG    
Sbjct: 137  DDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFREDTGRFRESSAISIGTTGQALG 196

Query: 823  --------VPVDTGARSEQSDSIIAVNSRPA-WKTKMCNKWWEASGNCPFGDKCHFAHGL 671
                      V+  A +  SD+  +   +P  WKTK+C K WE +G CPFG+KCHFAHGL
Sbjct: 197  HGSGVFNAAEVNRPANNAVSDASRSNIIKPVYWKTKLCTK-WEITGQCPFGEKCHFAHGL 255

Query: 670  AELKKFGGQNEVEMXXXXXXXXXXXXXXXXXASLKNTVAGG-SCKKPGL------SKFLA 512
            AEL+  GG+ EVE                    L N V+   +   P L       K L 
Sbjct: 256  AELQAPGGRTEVEAGNAGSVLTKAPPPL-----LPNNVSPSMTVNVPSLIEEEQGKKCLL 310

Query: 511  KWKSPKKINRIYADWIDD 458
            KWK  KKINRIYADW+DD
Sbjct: 311  KWKGQKKINRIYADWLDD 328


>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
            gi|223536247|gb|EEF37899.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 341

 Score =  248 bits (634), Expect = 2e-63
 Identities = 139/331 (41%), Positives = 188/331 (56%), Gaps = 25/331 (7%)
 Frame = -3

Query: 1336 GNHTVGFWPEMPIDNDQSRMAPGPEF----PPFKKPRNFDDNLSIXXXXXXXXXXXXXPA 1169
            G+  +G WP+ P+++++      P+F    PPFK+PRN +DN +                
Sbjct: 20   GSDAIGIWPQFPMNSNEQF---DPQFDHHQPPFKRPRNSEDN-NQSMNYRMPPPNNLPIN 75

Query: 1168 RGVSKIFFKTRPCEKFREGTCPYGSNCNFAHGIEDIRKPPPNWQEIVGF----HEDDRAE 1001
            +G + IFFKTR C KF+ G+C  G NCNFAHG++D+R+PPPNWQE+VG      ED  A 
Sbjct: 76   KGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQPPPNWQELVGVVVRGEEDRPAG 135

Query: 1000 KWDDDLKIITRHRLCKSFCAGKVCPYGKRCNYLHEDLGKYREEYGRCRESSAISISTTGV 821
             WDDD +II + +LCK F  G+ CPYG RCN+LHED  K+R++ GR RESSAISI TT  
Sbjct: 136  NWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFRDDAGRFRESSAISIGTTAP 195

Query: 820  PVDTGARSEQSDSIIAVNS--------------RPA-WKTKMCNKWWEASGNCPFGDKCH 686
            P+  G+      S++ VN               +P  WKTK+C K WE +G CPFG+KCH
Sbjct: 196  PMMHGSGGL---SVVEVNKPVNNAGADAYRGNMKPVYWKTKLCTK-WETTGQCPFGEKCH 251

Query: 685  FAHGLAELKKFGGQNEVEMXXXXXXXXXXXXXXXXXASLKNTVAGGSC--KKPGLSKFLA 512
            FAHG AEL+   G+ E E+                  S   T +  S   ++ G   FL 
Sbjct: 252  FAHGQAELQIPNGRAEGEVGNAGSILTKPPPILVTNGSPSMTASVPSLVEERQGKKCFL- 310

Query: 511  KWKSPKKINRIYADWIDDTSPTKSSPSELEN 419
            KWK  KKINRIY DW+DD     +  +++E+
Sbjct: 311  KWKGFKKINRIYGDWLDDLPLVHNLTNQVES 341


>ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|222848458|gb|EEE86005.1|
            predicted protein [Populus trichocarpa]
          Length = 313

 Score =  240 bits (612), Expect = 8e-61
 Identities = 133/299 (44%), Positives = 174/299 (58%), Gaps = 19/299 (6%)
 Frame = -3

Query: 1258 PPFKKPRNFDDNLSIXXXXXXXXXXXXXPARGVSKIFFKTRPCEKFREGTCPYGSNCNFA 1079
            PP+K+PRN +DN +                +G + IFFKTR C KF+ GTC  G NCNFA
Sbjct: 16   PPYKRPRNSEDNSNQSMSSRVPPTNSLPVHKGTTNIFFKTRVCAKFKTGTCRNGENCNFA 75

Query: 1078 HGIEDIRKPPPNWQEIVGF---HEDDR--AEKWDDDLKIITRHRLCKSFCAGKVCPYGKR 914
            HG++D+R+PPPNW+E+V      EDDR  A   +DDL+II + +LCK F  G+ CPYG R
Sbjct: 76   HGMQDLRQPPPNWKELVSVGVSSEDDRSTATNREDDLRIIHKMKLCKKFYNGEECPYGDR 135

Query: 913  CNYLHEDLGKYREEYGRCRESSAISISTT------------GVPVDTGARSEQSDSIIAV 770
            CN+LHED   +RE+ GR RESSAISI TT               V+  A +  SD+  + 
Sbjct: 136  CNFLHEDPANFREDTGRFRESSAISIGTTDHLMGQGSGIFNAAEVNRPANNAVSDAPRSN 195

Query: 769  NSRPA-WKTKMCNKWWEASGNCPFGDKCHFAHGLAELKKFGGQNEVEM-XXXXXXXXXXX 596
              +P  WKTK+C K WE +G CPFG+KCHFAHGLAEL+  G + EV+             
Sbjct: 196  LIKPVYWKTKLCTK-WEMTGQCPFGEKCHFAHGLAELQVPGVRTEVDAGNAGSNVTKAPT 254

Query: 595  XXXXXXASLKNTVAGGSCKKPGLSKFLAKWKSPKKINRIYADWIDDTSPTKSSPSELEN 419
                   S   TV   S  +   +K L KWK  KKINRIYADW+DD S   +S +++++
Sbjct: 255  PVLPNNMSPSMTVNVPSLVEEKGTKCLLKWKGQKKINRIYADWLDDLSLVHNSTNQVQS 313


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like [Vitis
            vinifera]
          Length = 349

 Score =  233 bits (593), Expect = 1e-58
 Identities = 134/321 (41%), Positives = 181/321 (56%), Gaps = 28/321 (8%)
 Frame = -3

Query: 1336 GNHTVGFWPEMPIDNDQSRMAPGPEFPPFKKPRNFDDNLSIXXXXXXXXXXXXXP----A 1169
            G+  +G W + P++N++  +    E+PP K+ RN +  +               P    +
Sbjct: 20   GDDDIGSWSQFPMNNEEYEVHSHFEYPPHKRTRNSEGQMPNSSPHPSMNPRIHPPNAPTS 79

Query: 1168 RGVSKIFFKTRPCEKFREGTCPYGSNCNFAHGIEDIRKPPPNWQEIV--GFHEDDRAEK- 998
            RG S IFFKTR C KF+ G C  G NCNFAHG+ED+R+PPPNWQE+V  G  E++R  K 
Sbjct: 80   RGTSNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQPPPNWQELVNVGGREEERGTKI 139

Query: 997  WDDDLKIITRHRLCKSFCAGKVCPYGKRCNYLHEDLGKYREEYGRCRESSAISISTTGVP 818
            WD+D +II + +LCK F  G+ CPYG RCN+LHED  K+R++  R RES AISI TTG P
Sbjct: 140  WDEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSARPRESFAISIGTTGPP 199

Query: 817  VDTGA----RSEQSDSIIAVNS---------RPA-WKTKMCNKWWEASGNCPFGDKCHFA 680
            ++ G+     S  S ++ ++NS         +P  WKTK+C K WE +G+CPFG+KCHFA
Sbjct: 200  MEHGSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCK-WETTGHCPFGEKCHFA 258

Query: 679  HGLAELKKFGGQN------EVEMXXXXXXXXXXXXXXXXXASLKNTVAGGSCKKPGLS-K 521
            HG AEL+  GG        E E+                 ++      G        + K
Sbjct: 259  HGQAELQMTGGGGGGGGWAEAEVGNTCSLPAKLPSVPANVSTPPELGTGAPINPERQNKK 318

Query: 520  FLAKWKSPKKINRIYADWIDD 458
             L + K  KKINRIYADWIDD
Sbjct: 319  LLLQSKGFKKINRIYADWIDD 339