BLASTX nr result

ID: Cimicifuga21_contig00020288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020288
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284943.1| PREDICTED: uncharacterized protein LOC100249...   166   2e-39
emb|CAN69845.1| hypothetical protein VITISV_038348 [Vitis vinifera]   164   9e-39
ref|XP_002319030.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002512336.1| conserved hypothetical protein [Ricinus comm...   157   8e-37
ref|XP_002872272.1| hypothetical protein ARALYDRAFT_910845 [Arab...   146   2e-33

>ref|XP_002284943.1| PREDICTED: uncharacterized protein LOC100249532 isoform 1 [Vitis
           vinifera] gi|359487717|ref|XP_003633636.1| PREDICTED:
           uncharacterized protein LOC100249532 isoform 2 [Vitis
           vinifera]
          Length = 242

 Score =  166 bits (419), Expect = 2e-39
 Identities = 93/146 (63%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
 Frame = +1

Query: 22  MAFL-LSLSRHPTKSLQNPNHKSKPTPNLTKTVTPCNISKRELALKTAAISILVLK-FFP 195
           MA L LSLS  P K  QNPN      P   K    CN SKR+  L TA++    L   +P
Sbjct: 1   MAILHLSLSPRPLKPPQNPN------PTTPKPRILCNSSKRDFILNTASLCAFSLSAHYP 54

Query: 196 NAPSFAETAPS-KSILSGIVNTKSWFQFFGSGFSIRVPPDFQDIMEPEDYNAGLSLYGDK 372
            A +FA+T+PS KSILS I NTK+WFQFFG GFSIRVPP+F+DIMEPED+NAGLSLYGDK
Sbjct: 55  VAIAFADTSPSSKSILSAIANTKTWFQFFGDGFSIRVPPEFEDIMEPEDFNAGLSLYGDK 114

Query: 373 AKPKTFAARFATPDGSEVLSVVNRPS 450
           AKP+TFAARFA+ DGSEVLSVV RP+
Sbjct: 115 AKPRTFAARFASSDGSEVLSVVIRPT 140


>emb|CAN69845.1| hypothetical protein VITISV_038348 [Vitis vinifera]
          Length = 242

 Score =  164 bits (414), Expect = 9e-39
 Identities = 92/146 (63%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
 Frame = +1

Query: 22  MAFL-LSLSRHPTKSLQNPNHKSKPTPNLTKTVTPCNISKRELALKTAAISILVLK-FFP 195
           MA L LSLS  P K  QNPN      P   K    CN SKR+  L TA++    L   +P
Sbjct: 1   MAILHLSLSPRPLKPPQNPN------PTTQKPRILCNSSKRDFILNTASLCAFSLSAHYP 54

Query: 196 NAPSFAETAPS-KSILSGIVNTKSWFQFFGSGFSIRVPPDFQDIMEPEDYNAGLSLYGDK 372
            A +FA+T+PS KSILS I NTK+WFQFFG GFSIRVPP+F+DIMEPED++AGLSLYGDK
Sbjct: 55  FAIAFADTSPSSKSILSAIANTKTWFQFFGDGFSIRVPPEFEDIMEPEDFDAGLSLYGDK 114

Query: 373 AKPKTFAARFATPDGSEVLSVVNRPS 450
           AKP+TFAARFA+ DGSEVLSVV RP+
Sbjct: 115 AKPRTFAARFASSDGSEVLSVVIRPT 140


>ref|XP_002319030.1| predicted protein [Populus trichocarpa] gi|222857406|gb|EEE94953.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  162 bits (410), Expect = 3e-38
 Identities = 91/150 (60%), Positives = 108/150 (72%), Gaps = 7/150 (4%)
 Frame = +1

Query: 22  MAFLLSLSRH----PTKSLQNPN-HKSKPTPNLTKTVTPCNISKRELALKTAAISILVLK 186
           MA LLSLS H    P    QNPN +  KPTP+ T    P  ISKR+   KT ++ ++ L 
Sbjct: 1   MAILLSLSPHHHHPPLNPRQNPNPYSPKPTPHATSL--PSTISKRQFIFKTTSLCLISLA 58

Query: 187 F-FPNAPSFAETAPS-KSILSGIVNTKSWFQFFGSGFSIRVPPDFQDIMEPEDYNAGLSL 360
              P A + AE +P  KS+LS + NTKSWFQF+G GF+IRVPP F+DIMEPEDY+AGLSL
Sbjct: 59  TQHPLAQALAEPSPPLKSVLSILANTKSWFQFYGDGFAIRVPPQFEDIMEPEDYSAGLSL 118

Query: 361 YGDKAKPKTFAARFATPDGSEVLSVVNRPS 450
           YGDKAKPKTFAARFA+ DGSEVL+VV RPS
Sbjct: 119 YGDKAKPKTFAARFASSDGSEVLNVVVRPS 148


>ref|XP_002512336.1| conserved hypothetical protein [Ricinus communis]
           gi|223548297|gb|EEF49788.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 240

 Score =  157 bits (397), Expect = 8e-37
 Identities = 91/149 (61%), Positives = 104/149 (69%), Gaps = 6/149 (4%)
 Frame = +1

Query: 22  MAFLLSLSRHPTKSLQNPNHKS----KPTPNLTKTVTPCNISKRELALKTAAISILVLKF 189
           MA L+SLS       QNPN       KP P L       N+SKR+  LKT ++ ++ L  
Sbjct: 1   MAILISLS------FQNPNQSIFNTLKPNPTLRS-----NVSKRQFLLKTTSLGVISLTT 49

Query: 190 F-PNAPSFAETA-PSKSILSGIVNTKSWFQFFGSGFSIRVPPDFQDIMEPEDYNAGLSLY 363
             P   S AE++ PSK  LSGI NTKSWFQF+G GFSIRVPP FQDIMEPED+NAGLSLY
Sbjct: 50  QNPLIQSLAESSSPSKPGLSGIANTKSWFQFYGDGFSIRVPPQFQDIMEPEDFNAGLSLY 109

Query: 364 GDKAKPKTFAARFATPDGSEVLSVVNRPS 450
           GDKAKP+TFAARFA+ DGSEVLSVV RPS
Sbjct: 110 GDKAKPRTFAARFASSDGSEVLSVVIRPS 138


>ref|XP_002872272.1| hypothetical protein ARALYDRAFT_910845 [Arabidopsis lyrata subsp.
           lyrata] gi|297318109|gb|EFH48531.1| hypothetical protein
           ARALYDRAFT_910845 [Arabidopsis lyrata subsp. lyrata]
          Length = 241

 Score =  146 bits (368), Expect = 2e-33
 Identities = 86/148 (58%), Positives = 103/148 (69%), Gaps = 5/148 (3%)
 Frame = +1

Query: 22  MAFLL-SLSRHPTKSLQNPNHKSKPTPNLTKTVTPCNISKRELALKTAA---ISILVLKF 189
           MA LL SLS HP      PN K +  PN  K V+P    +R++ L+TA+   +S ++   
Sbjct: 1   MAILLHSLSLHP------PNPKPQ-NPNKPKIVSPFATFRRDVVLRTASLCFVSFIIQN- 52

Query: 190 FPNAPSFAETAPS-KSILSGIVNTKSWFQFFGSGFSIRVPPDFQDIMEPEDYNAGLSLYG 366
            P   S A+   S K +  GI NTKSWFQFFG GF+IRVPPDF+D+ EPEDY+AGLSLYG
Sbjct: 53  -PIQESLADPLKSSKPLRLGIANTKSWFQFFGDGFAIRVPPDFEDVNEPEDYSAGLSLYG 111

Query: 367 DKAKPKTFAARFATPDGSEVLSVVNRPS 450
           DKAKP+TFAARF TPDGSEVLSVV RPS
Sbjct: 112 DKAKPQTFAARFQTPDGSEVLSVVIRPS 139


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