BLASTX nr result

ID: Cimicifuga21_contig00020285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020285
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529492.1| PREDICTED: uncharacterized protein LOC100785...    65   6e-09
tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    60   1e-07
ref|XP_003571238.1| PREDICTED: uncharacterized protein LOC100836...    60   2e-07
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]    59   5e-07
ref|NP_001170215.1| uncharacterized protein LOC100384166 [Zea ma...    59   5e-07

>ref|XP_003529492.1| PREDICTED: uncharacterized protein LOC100785875 [Glycine max]
          Length = 375

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/107 (30%), Positives = 54/107 (50%)
 Frame = +2

Query: 20  VNWTDDMDHLMVRTLQQQLELGKRTENRWMLCALTAVQDSLWRENAIRVPLKQIRNRLRV 199
           V WTD+MDH +   L  Q+ LG R E  +   A  A   +L     + +  + I NRL++
Sbjct: 91  VTWTDEMDHCLTELLVNQVMLGNRLEKFFKTSAYIAALTALNERFDLNLTKENIINRLKI 150

Query: 200 WKRMHDDASELMLMSGFGWDDENKSVVDEEEIWNNILELPRKAYLKH 340
           WK+ +D   E++    F WD+  K VV  +  W+  ++  +  Y +H
Sbjct: 151 WKKQYDVLKEMLSQGRFEWDEGCKMVVATDLAWDEYIK--KHPYARH 195


>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  FVNWTDDMDHLMVRTLQQQLELGKRTENRWMLCALTAVQDSLWRENAIRVPLKQIRNRLR 196
           +V W D+MD +++ T       G R +N W     TAV  ++  +  + +  + I +R +
Sbjct: 11  YVPWNDEMDKVLLDTFVDYYNKGDRCQNGWKSHVYTAVVKNVCEKCNVTITKENISSRSK 70

Query: 197 VWKRMHDDASELMLMSGFGWD-DENKSVVDEEEIWNNILELPRKA 328
            + + ++  + L+  SGFGWD ++NK  VD + +W+  +E  ++A
Sbjct: 71  TFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYIERNKEA 115


>ref|XP_003571238.1| PREDICTED: uncharacterized protein LOC100836964 [Brachypodium
           distachyon]
          Length = 269

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  FVNWTDDMDHLMVRTLQQQLELGKRTENRWMLCALTAVQDSLWRENAIRVPLKQIRNRLR 196
           ++ W+D MD  ++    ++   G R +N W      A   ++  +  + + ++ I +R +
Sbjct: 11  YLTWSDSMDKALLDVFVERYNKGDRAQNGWKPRVYIAAVKNVREKCEMEITMENIISRSK 70

Query: 197 VWKRMHDDASELMLMSGFGWD-DENKSVVDEEEIWNNILELPRKA 328
            + + H   S+++  SGFGWD D NK  VD +++WN  +   + A
Sbjct: 71  TFDKYHAIISKMLSQSGFGWDWDNNKISVDSDDVWNTYVHANKDA 115


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  FVNWTDDMDHLMVRTLQQQLELGKRTENRWMLCALTAVQDSLWRENAIRVPLKQIRNRLR 196
           +V W D+MD +++ T       G R +N W     TA   ++  +  + +  + I +R +
Sbjct: 308 YVPWNDEMDKVLLDTFVDYYNKGDRCQNGWKSHVYTAAVKNVCEKCNVTITKENISSRSK 367

Query: 197 VWKRMHDDASELMLMSGFGWD-DENKSVVDEEEIWNNILELPRKA 328
            + + ++  + L+  SGFGWD ++NK  VD + +W+  +E  ++A
Sbjct: 368 TFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVERNKEA 412


>ref|NP_001170215.1| uncharacterized protein LOC100384166 [Zea mays]
           gi|224034399|gb|ACN36275.1| unknown [Zea mays]
          Length = 261

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  FVNWTDDMDHLMVRTLQQQLELGKRTENRWMLCALTAVQDSLWRENAIRVPLKQIRNRLR 196
           +V W D+MD +++ T       G R +N W     TA   ++  +  + +  + I +R +
Sbjct: 11  YVPWNDEMDKVLLDTFVDYYNKGDRCQNGWKSHVYTAAVKNVCEKCNVTITKENISSRSK 70

Query: 197 VWKRMHDDASELMLMSGFGWD-DENKSVVDEEEIWNNILELPRKA 328
            + + ++  + L+  SGFGWD ++NK  VD + +W+  +E  ++A
Sbjct: 71  TFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVERNKEA 115


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