BLASTX nr result

ID: Cimicifuga21_contig00020271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020271
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283723.1| PREDICTED: probable calcium-binding protein ...    83   3e-14
ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago trun...    65   1e-08
ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002531850.1| calcium ion binding protein, putative [Ricin...    62   6e-08
ref|XP_002305364.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002283723.1| PREDICTED: probable calcium-binding protein CML45 [Vitis vinifera]
           gi|296082935|emb|CBI22236.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
 Frame = +1

Query: 319 WITGVEKFYSSSRCFFQSQ-------KVWSEMKIADSKSLKHKVSLNEKVEDGKLSKVDV 477
           W+T ++ F+S S  FFQSQ       ++W+E K  D +     +S N KV+D  L + D+
Sbjct: 31  WVTIIQGFFSRSMSFFQSQFSFFCNTELWAERKSQDFEVPSRPLSQNVKVDDRSLCREDM 90

Query: 478 EMVMGNLKIVCNHDEEIIHEKLGSNELSVLFEDKEPSIEEVKEA 609
           E VM  L I CN + E + E+L   EL+ LFE+KEPS+EE+KEA
Sbjct: 91  ETVMERLGICCNPEGEKLQERLRPEELAGLFEEKEPSLEELKEA 134


>ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355513833|gb|AES95456.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 200

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = +1

Query: 331 VEKFYSSSRCFFQSQKVWSEMKIADSKSLKHKVSLNEKVEDGKLSKVDVEMVMGNLKIVC 510
           ++KF+S+   F   Q    + ++   K +    S N   E G++ +V+VE VM  + I C
Sbjct: 45  IQKFFSTFWFFLLCQLRSGDYEVKGEKQVLETES-NVSRESGEIKRVEVETVMAKMGIFC 103

Query: 511 NHDEEIIHEKLGSNELSVLFEDKEPSIEEVKEA 609
           + + + + EK GSNELS LF++ EPS+EEVK A
Sbjct: 104 SSESDELDEKYGSNELSELFDENEPSLEEVKMA 136


>ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|222866867|gb|EEF03998.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
 Frame = +1

Query: 325 TGVEKFYSSSRCFFQSQ------KVWSE----MKIADSKSLKHKVSLNEKVEDGKLSKVD 474
           + ++KF +    F QSQ      ++W +         SK  +     N++ ++  + + D
Sbjct: 44  SNLQKFLARFWFFLQSQLGLGNSELWEDDDGNQDSELSKQTQESCFDNKRPDERSICRED 103

Query: 475 VEMVMGNLKIVCNHDEEIIHEKLGSNELSVLFEDKEPSIEEVKEA 609
           VEMVM NL + C+ + E + E +GS+E+S LF++KEPS+EEVKEA
Sbjct: 104 VEMVMENLGLFCSSESEELKEWMGSDEISQLFDEKEPSLEEVKEA 148


>ref|XP_002531850.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223528500|gb|EEF30528.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 168

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
 Frame = +1

Query: 322 ITGVEKFYSSSRCFFQSQ---KVWSEM--KIADSKSLKHKVSLNEKVEDGKLSKVDVEMV 486
           I  ++KF+S      +SQ     W E   K  DS+    +   + K +   + + +VEMV
Sbjct: 4   ICSIQKFFSRFWFSLRSQLSSNAWEEENNKNQDSELSNQQGCFDNKKDHRNIDREEVEMV 63

Query: 487 MGNLKIVCNHDEEIIHEKLGSNELSVLFEDKEPSIEEVKEA 609
           MGNL + C+ + E + +  G +ELS LF++KEPS+EEVK A
Sbjct: 64  MGNLGLFCSTESEKLEDSKGFDELSHLFDEKEPSLEEVKGA 104


>ref|XP_002305364.1| predicted protein [Populus trichocarpa] gi|222848328|gb|EEE85875.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
 Frame = +1

Query: 334 EKFYSSSRCFFQSQ------KVWSE---MKIADSKSLKHKVSLNEKVEDGKLSKVDVEMV 486
           +K +S  R F QSQ      ++W +    + +++     +   + K ++  + + DVEMV
Sbjct: 46  QKLFSRFRFFIQSQLSLGNSELWEDDDGNQDSETSMKSQESCFDNKRDERNICREDVEMV 105

Query: 487 MGNLKIVCNHDEEIIHEKLGSNELSVLFEDKEPSIEEVKE 606
           M N  + C+ + E + E + S+ELS LF++KEPS+EE+KE
Sbjct: 106 MENFGLFCSRESEDLKEWMDSDELSQLFDEKEPSLEEIKE 145


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