BLASTX nr result
ID: Cimicifuga21_contig00020268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00020268
(1653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ... 574 e-161
emb|CBI24753.3| unnamed protein product [Vitis vinifera] 551 e-154
ref|NP_190510.3| Transcription factor IIIC, subunit 5 [Arabidops... 486 e-134
dbj|BAF00928.1| hypothetical protein [Arabidopsis thaliana] 485 e-134
ref|XP_003622988.1| General transcription factor 3C polypeptide ... 476 e-132
>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
vinifera]
Length = 568
Score = 574 bits (1479), Expect = e-161
Identities = 298/523 (56%), Positives = 367/523 (70%), Gaps = 6/523 (1%)
Frame = -1
Query: 1551 GVIKDGTISGILPENVGFAVHYPGYPSSTSRAIETLGGSEGIHKARALQSERLKLHFRPE 1372
GVI++G+ISG +P N F+VHYP YPSST+RAIETLGG++ I KAR+ QS +L+LHFRPE
Sbjct: 2 GVIEEGSISGYIPSNEAFSVHYPAYPSSTARAIETLGGTQAIRKARSSQSNKLELHFRPE 61
Query: 1371 DPYSHPAFGDLRPCSNLLLKISKTRTIEDRDXXXXXXXXXXXXXXXXXXXSIICHLETVK 1192
DPYSHPAFG+L+PC+NLLL+ISK ++ + + E+V
Sbjct: 62 DPYSHPAFGELQPCNNLLLRISKKKSTDGQS-------------------------ESVA 96
Query: 1191 NGHESTVPENAPDACSKGNQPQTEEAAMLGHLSADIVARVPEAYHFNGMVDYQHVLAVHA 1012
G E +A G P L ADI+ARV EAYHFNGMVDYQHVL VHA
Sbjct: 97 TGEEV-------EAQISGEVPI--------RLCADIIARVSEAYHFNGMVDYQHVLPVHA 141
Query: 1011 HTGNNKKRKRNEADEEPNFAKGGLMEMDQEDVMILVPPLFSPKDVPEKLVLKPCATVSSK 832
+++KRN A+ EP+ KG L+++DQED+MIL+PPLFSPKDVPEKLVL+P T++ K
Sbjct: 142 DVA--RRKKRNWAEVEPHLEKGDLVDVDQEDLMILLPPLFSPKDVPEKLVLRPSMTLNLK 199
Query: 831 KKQEAIVQQRWEMQIEPCLAIDFNIEEIPRKINWEDNIPRGSDHWEWQMAVSQLFDERPI 652
KKQE +VQQRWEM IEPCLAIDF I+EIP+K+NWE IP+GS+ WEWQMAVS LFDERPI
Sbjct: 200 KKQEGVVQQRWEMGIEPCLAIDFEIKEIPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPI 259
Query: 651 WPTHSLNLRLLDKGATPGPHMLKRLLFRTAYYFSTGPYRRFWIRKGYDPRKDPESRIYQT 472
WP +L RLLDKG G + L+RLLFRTAYYFS GP+ RFWIRKGYDPRK+P+S IYQ
Sbjct: 260 WPKGALTERLLDKGLNVGDYTLRRLLFRTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQR 319
Query: 471 VDFRVPPPLRYIGDVNTTDKLKHMWKEICAFHVFPCKSQTSLQLFELDDDYIQKEIKKP- 295
+DFRVPP LR D N + LK W++IC+F VFP K TSLQLFEL DDYIQ+EI+KP
Sbjct: 320 IDFRVPPSLRSYCDANAANGLKQRWEDICSFRVFPYKCHTSLQLFELADDYIQQEIRKPL 379
Query: 294 PEETCSSSTGWFSSYVHDSLRLRVAVRFLSIYPKTGAESFLKSASVRFAKSKRAHVLKRD 115
+ TC+ +TGWFS V +SLRL V VRFLSI P+T AE LKSAS RF KSKR H+ + +
Sbjct: 380 KQTTCTGATGWFSYRVLESLRLCVMVRFLSICPETSAEYLLKSASDRFEKSKRMHIYENN 439
Query: 114 SRPVEH--EQVNKESSSRVTKVSPTKLKD---ADLVYDDGREE 1
RP E ++VNKE K P + D ++ ++G EE
Sbjct: 440 LRPNEEGIQEVNKELEGDKDKEEPNDVDDDEEDEMEAENGEEE 482
>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 551 bits (1421), Expect = e-154
Identities = 294/561 (52%), Positives = 363/561 (64%), Gaps = 44/561 (7%)
Frame = -1
Query: 1551 GVIKDGTISGILPENVGFAVHYPGYPSSTSRAIETLGGSEGIHKARALQSERLKLHFRPE 1372
GVI++G+ISG +P N F+VHYP YPSST+RAIETLGG++ I KAR+ QS +L+LHFRPE
Sbjct: 2 GVIEEGSISGYIPSNEAFSVHYPAYPSSTARAIETLGGTQAIRKARSSQSNKLELHFRPE 61
Query: 1371 DPYSHPAFGDLRPCSNLLLKISKTRTIEDRDXXXXXXXXXXXXXXXXXXXSIICHLETVK 1192
DPYSHPAFG+L+PC+NLLL+ISK ++ +
Sbjct: 62 DPYSHPAFGELQPCNNLLLRISKKKSTD-------------------------------- 89
Query: 1191 NGHESTVPENAPDACSKGNQPQTEEAAMLGHLSADIVARVPEAYHFNGMVDYQHVLAVHA 1012
G + V + G P L ADI+ARV EAYHFNGMVDYQHVL VHA
Sbjct: 90 -GQSAEVSSKVSKSQISGEVPI--------RLCADIIARVSEAYHFNGMVDYQHVLPVHA 140
Query: 1011 HTGNNKKRKRNEADEEPNFAKGGLMEMDQEDVMILVPPLFSPKDVPEKLVLKPCATVSSK 832
+++KRN A+ EP+ KG L+++DQED+MIL+PPLFSPKDVPEKLVL+P T++ K
Sbjct: 141 DVA--RRKKRNWAEVEPHLEKGDLVDVDQEDLMILLPPLFSPKDVPEKLVLRPSMTLNLK 198
Query: 831 KKQEAIVQQRWEMQIEPCLAIDFNIEEI-------------------------------- 748
KKQE +VQQRWEM IEPCLAIDF I++I
Sbjct: 199 KKQEGVVQQRWEMGIEPCLAIDFEIKDILIIYCLYRMCITSHMTSFSRIPLKLLVTPLLT 258
Query: 747 ------PRKINWEDNIPRGSDHWEWQMAVSQLFDERPIWPTHSLNLRLLDKGATPGPHML 586
P+K+NWE IP+GS+ WEWQMAVS LFDERPIWP +L RLLDKG G + L
Sbjct: 259 KVVEIIPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGLNVGDYTL 318
Query: 585 KRLLFRTAYYFSTGPYRRFWIRKGYDPRKDPESRIYQTVDFRVPPPLRYIGDVNTTDKLK 406
+RLLFRTAYYFS GP+ RFWIRKGYDPRK+P+S IYQ +DFRVPP LR D N + LK
Sbjct: 319 RRLLFRTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQRIDFRVPPSLRSYCDANAANGLK 378
Query: 405 HMWKEICAFHVFPCKSQTSLQLFELDDDYIQKEIKKP-PEETCSSSTGWFSSYVHDSLRL 229
W++IC+F VFP K TSLQLFEL DDYIQ+EI+KP + TC+ +TGWFS V +SLRL
Sbjct: 379 QRWEDICSFRVFPYKCHTSLQLFELADDYIQQEIRKPLKQTTCTGATGWFSYRVLESLRL 438
Query: 228 RVAVRFLSIYPKTGAESFLKSASVRFAKSKRAHVLKRDSRPVEH--EQVNKESSSRVTKV 55
V VRFLSI P+T AE LKSAS RF KSKR H+ + + RP E ++VNKE K
Sbjct: 439 CVMVRFLSICPETSAEYLLKSASDRFEKSKRMHIYENNLRPNEEGIQEVNKELEGDKDKE 498
Query: 54 SPTKLKD---ADLVYDDGREE 1
P + D ++ ++G EE
Sbjct: 499 EPNDVDDDEEDEMEAENGEEE 519
>ref|NP_190510.3| Transcription factor IIIC, subunit 5 [Arabidopsis thaliana]
gi|332645018|gb|AEE78539.1| Transcription factor IIIC,
subunit 5 [Arabidopsis thaliana]
Length = 574
Score = 486 bits (1250), Expect = e-134
Identities = 252/520 (48%), Positives = 332/520 (63%), Gaps = 3/520 (0%)
Frame = -1
Query: 1551 GVIKDGTISGILPENVGFAVHYPGYPSSTSRAIETLGGSEGIHKARALQSERLKLHFRPE 1372
G+I++GTISG LP F VH+PGYPSS SRAIETLGG +GI +AR S +L+L FRPE
Sbjct: 2 GIIEEGTISGTLPSKEAFVVHFPGYPSSISRAIETLGGIQGITQARESISNKLELRFRPE 61
Query: 1371 DPYSHPAFGDLRPCSNLLLKISKTRTIEDRDXXXXXXXXXXXXXXXXXXXSIICHLETVK 1192
DPY+HPA G+ RPCS LL+ISK + +K
Sbjct: 62 DPYAHPALGEQRPCSGFLLRISK---------------------------------QDIK 88
Query: 1191 NGHESTVPENAPDACSKGNQPQTEEAAMLGHLSADIVARVPEAYHFNGMVDYQHVLAVHA 1012
+V + + D C EEA+ + L ADIVAR+ E++HF+GM DYQHV+ +HA
Sbjct: 89 KPESQSVLDTSRDVC-------LEEASPV--LCADIVARLSESFHFDGMADYQHVIPIHA 139
Query: 1011 HTGNNKKRKRNEADEEPNFAKGGLMEMDQEDVMILVPPLFSPKDVPEKLVLKPCATVSSK 832
KKRK + D P K LM + EDVM+L+P F+PKD+P+ + LKP AT K
Sbjct: 140 DIAQQKKRKWMDVD--PLTGKSDLMGLADEDVMMLLPQFFAPKDIPDNVALKPPATSGPK 197
Query: 831 KKQEAIVQQRWEMQIEPCLAIDFNIEEIPRKINWEDNIPRGSDHWEWQMAVSQLFDERPI 652
KK +A Q +E+ + P AIDF+++EIP+K+ WED + R S+HW+WQ+AVS LF+ERPI
Sbjct: 198 KKDDAATQNFYEIDVGPVFAIDFSVKEIPKKLKWEDFVSRSSNHWQWQVAVSALFEERPI 257
Query: 651 WPTHSLNLRLLDKGATPGPHMLKRLLFRTAYYFSTGPYRRFWIRKGYDPRKDPESRIYQT 472
W S+ RLLDKG HML R L R AYYFS+GP+ RFWI++GYDPR DPESR+YQ
Sbjct: 258 WTRDSVVQRLLDKGLKCTHHMLNRFLLRAAYYFSSGPFLRFWIKRGYDPRNDPESRVYQR 317
Query: 471 VDFRVPPPLRYIGDVNTTDKLKHMWKEICAFHVFPCKSQTSLQLFELDDDYIQKEIKKPP 292
++FRVPP LR D N T+ K W +ICAF +FP K QT LQLFELDD+YIQ+EI+KPP
Sbjct: 318 MEFRVPPELRGYCDANATNNSKPSWNDICAFKLFPFKCQTFLQLFELDDEYIQREIRKPP 377
Query: 291 EE-TCSSSTGWFSSYVHDSLRLRVAVRFLSIYPKTGAESFLKSASVRFAKSKRAHVLKRD 115
++ TCS +GWFS + D+LRLRVAVRF+S++P+TG E KS F +S++ + K
Sbjct: 378 KQTTCSHKSGWFSEAMLDTLRLRVAVRFVSVFPETGFEDVFKSIQEEFERSEKVQIQKET 437
Query: 114 SRP--VEHEQVNKESSSRVTKVSPTKLKDADLVYDDGREE 1
+P V+H + K S T S + DA+ V +DG +E
Sbjct: 438 LKPSLVKHREATKGSEDMETFKSVNENVDAN-VNEDGEDE 476
>dbj|BAF00928.1| hypothetical protein [Arabidopsis thaliana]
Length = 574
Score = 485 bits (1248), Expect = e-134
Identities = 252/520 (48%), Positives = 331/520 (63%), Gaps = 3/520 (0%)
Frame = -1
Query: 1551 GVIKDGTISGILPENVGFAVHYPGYPSSTSRAIETLGGSEGIHKARALQSERLKLHFRPE 1372
G+I++GTISG LP F VH+PGYPSS SRAIETLGG +GI +AR S +L+L FRPE
Sbjct: 2 GIIEEGTISGTLPSKEAFVVHFPGYPSSISRAIETLGGIQGITQARESISNKLELRFRPE 61
Query: 1371 DPYSHPAFGDLRPCSNLLLKISKTRTIEDRDXXXXXXXXXXXXXXXXXXXSIICHLETVK 1192
DPY+HPA G+ RPCS LL+ISK + +K
Sbjct: 62 DPYAHPALGEQRPCSGFLLRISK---------------------------------QDIK 88
Query: 1191 NGHESTVPENAPDACSKGNQPQTEEAAMLGHLSADIVARVPEAYHFNGMVDYQHVLAVHA 1012
+V + + D C EEA+ + L ADIVAR+ E++HF+GM DYQHV+ +HA
Sbjct: 89 KPESQSVLDTSRDVC-------LEEASPV--LCADIVARLSESFHFDGMADYQHVIPIHA 139
Query: 1011 HTGNNKKRKRNEADEEPNFAKGGLMEMDQEDVMILVPPLFSPKDVPEKLVLKPCATVSSK 832
KKRK + D P K LM + EDVM+L+P F+PKD+P+ + LKP AT K
Sbjct: 140 DIAQQKKRKWMDVD--PLTGKSDLMGLADEDVMMLLPQFFAPKDIPDNVALKPPATSGPK 197
Query: 831 KKQEAIVQQRWEMQIEPCLAIDFNIEEIPRKINWEDNIPRGSDHWEWQMAVSQLFDERPI 652
KK + Q +E+ + P AIDF+++EIP+K+ WED + R S+HW+WQ+AVS LF+ERPI
Sbjct: 198 KKDDVATQNFYEIDVGPVFAIDFSVKEIPKKLKWEDFVSRSSNHWQWQVAVSALFEERPI 257
Query: 651 WPTHSLNLRLLDKGATPGPHMLKRLLFRTAYYFSTGPYRRFWIRKGYDPRKDPESRIYQT 472
W S+ RLLDKG HML R L R AYYFS+GP+ RFWI++GYDPR DPESR+YQ
Sbjct: 258 WTRDSVVQRLLDKGLKCTHHMLNRFLLRAAYYFSSGPFLRFWIKRGYDPRNDPESRVYQR 317
Query: 471 VDFRVPPPLRYIGDVNTTDKLKHMWKEICAFHVFPCKSQTSLQLFELDDDYIQKEIKKPP 292
++FRVPP LR D N T+ K W +ICAF +FP K QT LQLFELDD+YIQ+EI+KPP
Sbjct: 318 MEFRVPPELRGYCDANATNNSKPSWNDICAFKLFPFKCQTFLQLFELDDEYIQREIRKPP 377
Query: 291 EE-TCSSSTGWFSSYVHDSLRLRVAVRFLSIYPKTGAESFLKSASVRFAKSKRAHVLKRD 115
++ TCS +GWFS + D+LRLRVAVRF+S++P+TG E KS F +SK+ + K
Sbjct: 378 KQTTCSHKSGWFSEAMLDTLRLRVAVRFVSVFPETGFEDVFKSIQEEFERSKKVQIQKET 437
Query: 114 SRP--VEHEQVNKESSSRVTKVSPTKLKDADLVYDDGREE 1
+P V+H + K S T S + DA+ V +DG +E
Sbjct: 438 LKPSLVKHREATKGSEDIETFKSVNENVDAN-VNEDGEDE 476
>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
gi|355498003|gb|AES79206.1| General transcription factor
3C polypeptide [Medicago truncatula]
Length = 612
Score = 476 bits (1225), Expect = e-132
Identities = 262/509 (51%), Positives = 333/509 (65%), Gaps = 37/509 (7%)
Frame = -1
Query: 1551 GVIKDGTISGILPENVGFAVHYPGYPSSTSRAIETLGGSEGIHKARALQSERLKLHFRPE 1372
GVIKDGTISG+LPE GF VHYPGYPS+TSRA++TLGGS+GI KAR+ Q+ +L+L FRPE
Sbjct: 7 GVIKDGTISGVLPEPQGFLVHYPGYPSTTSRAVDTLGGSQGILKARSSQANKLELRFRPE 66
Query: 1371 DPYSHPAFGDLRPCSNLLLKISKTRTIEDRDXXXXXXXXXXXXXXXXXXXSIICHLETVK 1192
DPY HPAFG+ RP + LLLKISK R + D D +C +E
Sbjct: 67 DPYCHPAFGERRPTNALLLKISK-RKLPDDDGATTSNS--------------MCGME--- 108
Query: 1191 NGHESTVPENAPDACSKGNQPQTEEAAMLGHLSADIVARVPEAYHFNGMVDYQHVLAVHA 1012
+G ++ E+ A K + EEA +L ADIV RVPEAY F GM DYQ+V+ VHA
Sbjct: 109 HGMQADNVESEHGAADKVD----EEA----NLCADIVGRVPEAYFFEGMADYQYVVPVHA 160
Query: 1011 HTGNNKKRKRNEADEEPNFAKGGLMEMDQEDVMILVPPLFSPKDVPEKLVLKPCATVSSK 832
KKR +E EE + AKGG +++D ED+MI+VPP+F+PKD+PE L+L+P SSK
Sbjct: 161 DVAKRKKRNWSEP-EETHLAKGGRIDVDHEDIMIIVPPIFAPKDMPEDLLLRPPTVSSSK 219
Query: 831 KKQEAIVQQRWEMQIEPCLAIDF---------NIE---------------EIPRKINWED 724
KK+E IV +E+ +EP LA+DF NI +IP+K+NWE+
Sbjct: 220 KKEEEIVHPHFEIDMEPVLALDFFQIKDILKENISKHIALLWFSFDLAVLQIPKKVNWEE 279
Query: 723 NIPRGSDHWEWQMAVSQLFDERPIWPTHSLNLRLLDKGATPGPHMLKRLLFRTAYYFSTG 544
IP+GS+ WE QMAVS++FDE+PIW +SL RLLDKG + M +RLL R AYYFS+G
Sbjct: 280 YIPQGSEQWESQMAVSRMFDEKPIWSKNSLTERLLDKGLSFSHGMFRRLLSRIAYYFSSG 339
Query: 543 PYRRFWIRKGYDPRKDPESR------------IYQTVDFRVPPPLRYIGDVNTTDKLKHM 400
P++RFWI+KGYDPRKDP SR +YQ +D+RVP PLR D + DKLKH
Sbjct: 340 PFQRFWIKKGYDPRKDPGSRMIGTVPLVRKLLLYQRIDYRVPVPLRSFCDTYSADKLKHK 399
Query: 399 WKEICAFHVFPCKSQTSLQLFELDDDYIQKEIKKPP-EETCSSSTGWFSSYVHDSLRLRV 223
W +ICAF FP K QTSLQ EL DDYIQ EI KPP ++TC+ +GWFS + LR R+
Sbjct: 400 WGDICAFRAFPYKFQTSLQFVELIDDYIQSEINKPPMQDTCTFESGWFSLNKINCLRQRL 459
Query: 222 AVRFLSIYPKTGAESFLKSASVRFAKSKR 136
VR+LSI+PK GAES L+ A+ +F K KR
Sbjct: 460 MVRYLSIFPKPGAESLLRVAASKFEKLKR 488