BLASTX nr result

ID: Cimicifuga21_contig00020258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020258
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332012.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243...    56   3e-06

>ref|XP_002332012.1| predicted protein [Populus trichocarpa] gi|222875237|gb|EEF12368.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
 Frame = +2

Query: 71  SQHSMMKK--QSRKVKRSPMKIVYIGNPMMFKAKNCFEFRQIVQQLTGQDSPTETRGPCA 244
           SQ    KK  +S K KR P+KI YI +P M KA N  EFR IVQ+LTG+DS  E   PC 
Sbjct: 10  SQQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVE--DPCD 67

Query: 245 ATNVGVVNRTPPIYATPKATTKISIMDEIEIVDG 346
           A          P + TP+         ++E VDG
Sbjct: 68  ANEEA---SQVPRHGTPRF--------DVESVDG 90


>ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243497 [Vitis vinifera]
          Length = 143

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
 Frame = +2

Query: 50  MDK-LRVQSQHSMMKKQSRKVKRSPMKIVYIGNPMMFKAKNCFEFRQIVQQLTGQDSPTE 226
           MDK L V  + +  K +++K    P K+VYIGNP M K K   EFR +VQ+LTGQD+  +
Sbjct: 1   MDKALSVDQRKASGKAKAKKTTTKPFKVVYIGNPRMVKVKES-EFRALVQELTGQDA--D 57

Query: 227 TRGPCAATNVGVVNRTPPIYATPKATTKISIMDEIEIVDGDXXXXXXXXXXXAELVDDFF 406
              P     +  V     +        ++  +D   +  GD            E +DD F
Sbjct: 58  ISDPTVFEEIHDVGGNQKVPDVANNENELE-LDVPPVDRGD--EPPQMSDIPMEQLDDVF 114

Query: 407 SVEMLENFDG 436
           + ++LENF G
Sbjct: 115 TPQLLENFTG 124


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