BLASTX nr result

ID: Cimicifuga21_contig00020193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020193
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28974.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002274771.1| PREDICTED: ankyrin repeat-containing protein...    96   2e-18
ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002526475.1| protein binding protein, putative [Ricinus c...    80   2e-13
ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>emb|CBI28974.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
 Frame = -1

Query: 433 MVVSVLIATVTFQAVLSPPGGFNDIDNHKRWLLNDVTNMAA--DNPVFFVLFSIMNSIGF 260
           MVV VLIATVT+QA+L PPGGF+     + W +      A    +   F+ F+I+NS+GF
Sbjct: 225 MVVVVLIATVTYQAILQPPGGFDA----QGWNITPFQGPALMIKSLALFIPFTILNSVGF 280

Query: 259 VTSLVMITVLTRRFPLKELLRLAVLSMAATYLCSIVYIEMSNTIVVSILAMLMFSIM 89
            TS+ +I +L  RFPLK+LLRLAV SMAATY C  +Y+  +  IV  ++ M M  ++
Sbjct: 281 FTSVAVIILLINRFPLKKLLRLAVCSMAATYACGFLYLAPAAFIVSLVVPMTMAVVL 337


>ref|XP_002274771.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 462

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
 Frame = -1

Query: 433 MVVSVLIATVTFQAVLSPPGGFNDIDNHKRWLLNDVTNMAA--DNPVFFVLFSIMNSIGF 260
           MVV VLIATVT+QA+L PPGGF+     + W +      A    +   F+ F+I+NS+GF
Sbjct: 316 MVVVVLIATVTYQAILQPPGGFDA----QGWNITPFQGPALMIKSLALFIPFTILNSVGF 371

Query: 259 VTSLVMITVLTRRFPLKELLRLAVLSMAATYLCSIVYIEMSNTIVVSILAMLMFSIM 89
            TS+ +I +L  RFPLK+LLRLAV SMAATY C  +Y+  +  IV  ++ M M  ++
Sbjct: 372 FTSVAVIILLINRFPLKKLLRLAVCSMAATYACGFLYLAPAAFIVSLVVPMTMAVVL 428


>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
 Frame = -1

Query: 433 MVVSVLIATVTFQAVLSPPGGFNDIDNHKRWLLNDVTN--------MAADNPVFFVLFSI 278
           MVV+ LIATVT+QA LSPP GF   ++ +   +N V          +   +P  F +F++
Sbjct: 303 MVVATLIATVTYQATLSPPSGFWSAESRRSQTINSVQKRDILPGEAVMTGDPEVFAVFTV 362

Query: 277 MNSIGFVTSLVMITVLTRRFPLKELLRLAVLSMAATYLCSIVYI 146
            N++GF  S+ MI++LT  FPL+  LRLA+LSM ATY+ +++Y+
Sbjct: 363 FNAVGFFASIAMISLLTSGFPLRAGLRLAILSMTATYVIAVIYM 406


>ref|XP_002526475.1| protein binding protein, putative [Ricinus communis]
           gi|223534150|gb|EEF35866.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 8/97 (8%)
 Frame = -1

Query: 433 MVVSVLIATVTFQAVLSPPGGFNDIDNHKRWLLNDVTN--------MAADNPVFFVLFSI 278
           MVV+VLIATVT+QA+LSPP GF   ++     +N V          + A +P  F +F++
Sbjct: 145 MVVAVLIATVTYQAILSPPSGFWSTESRNSHSINSVERRDVLPGEAVMATDPEVFAVFTV 204

Query: 277 MNSIGFVTSLVMITVLTRRFPLKELLRLAVLSMAATY 167
            N++GF  SL MI++LT  FPL+  LRLA+LS+   +
Sbjct: 205 FNALGFFASLAMISLLTSGFPLRACLRLAILSIVCPF 241


>ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|222832582|gb|EEE71059.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 18/132 (13%)
 Frame = -1

Query: 433 MVVSVLIATVTFQAVLSPPGGF---NDIDNHKRWLLNDVTN------MAADNPVFFVLFS 281
           +V++VL+AT TFQ  + PPGG      I + K    N+  +      MA  N V F+LF 
Sbjct: 298 LVIAVLVATATFQVGVGPPGGVWQDTSIPDQKNITSNNTAHFAGQSIMATTNTVGFMLFV 357

Query: 280 IMNSIGFVTSLVMITVLTRRFPLKELLRLAVLSMAATYLCSI---------VYIEMSNTI 128
             NS+GF  SL M+ VLT +FPL+  L++ +L+M  TY  ++         ++++++ TI
Sbjct: 358 FFNSVGFSMSLYMLYVLTSKFPLQFELQICLLAMYCTYGTALSCIVPSNLYLFVQLTTTI 417

Query: 127 VVSILAMLMFSI 92
           + S ++ L  S+
Sbjct: 418 LSSTMSALARSV 429


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