BLASTX nr result

ID: Cimicifuga21_contig00020179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020179
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15013.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002282383.1| PREDICTED: uncharacterized protein LOC100267...    81   8e-14
ref|XP_002321607.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002318056.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002511384.1| conserved hypothetical protein [Ricinus comm...    66   3e-09

>emb|CBI15013.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/98 (51%), Positives = 60/98 (61%), Gaps = 11/98 (11%)
 Frame = +3

Query: 141 MQSLSLKVFTDLNSGAGRSLPRQR-----------NCRNLSKRTVKVVACLFSDRNGVEG 287
           M +LS K F DLN G  RS P +            NCR+  +R  ++ AC     +G  G
Sbjct: 99  MHALSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDF-RRNCRIFAC----SSGANG 153

Query: 288 EKQILSSFASRSHTYALLKQQMEVAAKSEDYKEAARIR 401
           E Q  SSF SRS TYALLKQQ++VAAKSEDYKEAAR+R
Sbjct: 154 ENQSPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLR 191


>ref|XP_002282383.1| PREDICTED: uncharacterized protein LOC100267315 [Vitis vinifera]
          Length = 277

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/98 (51%), Positives = 60/98 (61%), Gaps = 11/98 (11%)
 Frame = +3

Query: 141 MQSLSLKVFTDLNSGAGRSLPRQR-----------NCRNLSKRTVKVVACLFSDRNGVEG 287
           M +LS K F DLN G  RS P +            NCR+  +R  ++ AC     +G  G
Sbjct: 1   MHALSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDF-RRNCRIFAC----SSGANG 55

Query: 288 EKQILSSFASRSHTYALLKQQMEVAAKSEDYKEAARIR 401
           E Q  SSF SRS TYALLKQQ++VAAKSEDYKEAAR+R
Sbjct: 56  ENQSPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLR 93


>ref|XP_002321607.1| predicted protein [Populus trichocarpa] gi|222868603|gb|EEF05734.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 16/103 (15%)
 Frame = +3

Query: 141 MQSLSLKVFTDLNSGAGRSLPRQ------RNCRNLSK--RTVKVVACLFSDRNGVEGEKQ 296
           MQSL+LK+ TD ++GA R +P +      R C NL    R  ++VAC      G EG   
Sbjct: 1   MQSLNLKLLTDFSTGARRYVPGRSFGTEWRQCLNLRNYSRNCRIVACSVERDGGGEGASS 60

Query: 297 ILSS--------FASRSHTYALLKQQMEVAAKSEDYKEAARIR 401
             SS        F SRS TYA+LKQQMEVAA+SEDY+EAAR+R
Sbjct: 61  SSSSSSDPSPSSFLSRSQTYAMLKQQMEVAAQSEDYEEAARLR 103


>ref|XP_002318056.1| predicted protein [Populus trichocarpa] gi|222858729|gb|EEE96276.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 14/101 (13%)
 Frame = +3

Query: 141 MQSLSLKVFTDLNSGAGRSLP------RQRNCRN--LSKRTVKVVACLFS-DRNGV---- 281
           MQSL+L++ TD ++G  R +P       +R C +  +S R  ++VAC    D NG     
Sbjct: 1   MQSLNLRLSTDFSTGTRRFVPGRSFGEERRQCLSFRVSYRNCRIVACSVERDGNGEGTSS 60

Query: 282 -EGEKQILSSFASRSHTYALLKQQMEVAAKSEDYKEAARIR 401
             G     SSF SRS TYA+LKQQMEVAA+SEDY+EAARIR
Sbjct: 61  SSGSDHSPSSFLSRSQTYAMLKQQMEVAAQSEDYEEAARIR 101


>ref|XP_002511384.1| conserved hypothetical protein [Ricinus communis]
           gi|223550499|gb|EEF51986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 48/124 (38%), Positives = 60/124 (48%), Gaps = 37/124 (29%)
 Frame = +3

Query: 141 MQSLSLKVFTDLNSGAGRSLPRQ-------------------------RNCRNLSKRTVK 245
           + S S+KVFTD N+G     P +                         RN  N +  + +
Sbjct: 4   LASSSIKVFTDFNTGRRTCFPVRSSGFDRRIQQHQQLVINLGVSPSYFRNFSNNNSNSCR 63

Query: 246 VVACLFSDRNGV------------EGEKQILSSFASRSHTYALLKQQMEVAAKSEDYKEA 389
           +VAC   +RNG              G     SSFASR+ TYA LKQQMEVAA+SEDY+EA
Sbjct: 64  IVACSV-ERNGNGGSGASSSSSSGSGSDYNSSSFASRTQTYAFLKQQMEVAAQSEDYEEA 122

Query: 390 ARIR 401
           ARIR
Sbjct: 123 ARIR 126


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