BLASTX nr result
ID: Cimicifuga21_contig00020162
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00020162 (478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR16477.1| unknown [Picea sitchensis] 108 4e-22 gb|ABK25762.1| unknown [Picea sitchensis] 105 5e-21 ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|2... 94 9e-18 ref|XP_001785843.1| predicted protein [Physcomitrella patens sub... 94 1e-17 ref|XP_002961990.1| hypothetical protein SELMODRAFT_230023 [Sela... 93 2e-17 >gb|ABR16477.1| unknown [Picea sitchensis] Length = 337 Score = 108 bits (270), Expect = 4e-22 Identities = 51/63 (80%), Positives = 57/63 (90%) Frame = +3 Query: 3 RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182 RLQCQGVCGAD F+S+SI+ A++ IVAKEGP ALLRGLKPR+LFHAPAAAICWSTYEA K Sbjct: 266 RLQCQGVCGADRFTSSSIQNAIQTIVAKEGPTALLRGLKPRMLFHAPAAAICWSTYEACK 325 Query: 183 KFL 191 FL Sbjct: 326 SFL 328 >gb|ABK25762.1| unknown [Picea sitchensis] Length = 311 Score = 105 bits (261), Expect = 5e-21 Identities = 48/69 (69%), Positives = 58/69 (84%) Frame = +3 Query: 3 RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182 RLQCQGVCGAD F+++SI +++IV KEGP AL+RGLKPR+LFHAPAAAICWSTYEA K Sbjct: 239 RLQCQGVCGADRFTNSSISDVVRKIVRKEGPAALMRGLKPRILFHAPAAAICWSTYEASK 298 Query: 183 KFLQRVPES 209 FL V ++ Sbjct: 299 TFLHNVNQA 307 >ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1| predicted protein [Populus trichocarpa] Length = 329 Score = 94.4 bits (233), Expect = 9e-18 Identities = 45/70 (64%), Positives = 53/70 (75%) Frame = +3 Query: 3 RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182 +LQCQGVCG D FSS+SI +K IV K+G Q L+RG PR+LFHAPAAAICWSTYEA K Sbjct: 258 QLQCQGVCGCDRFSSSSIGNVIKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWSTYEASK 317 Query: 183 KFLQRVPESP 212 F R+ +P Sbjct: 318 DFFHRLNGNP 327 >ref|XP_001785843.1| predicted protein [Physcomitrella patens subsp. patens] gi|162662497|gb|EDQ49344.1| predicted protein [Physcomitrella patens subsp. patens] Length = 290 Score = 94.0 bits (232), Expect = 1e-17 Identities = 42/65 (64%), Positives = 51/65 (78%) Frame = +3 Query: 3 RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182 RLQCQGVCGAD + ++S+ + IV +EGP AL RG++PRVLFH PAAAICWSTYEA K Sbjct: 216 RLQCQGVCGADRYKNSSVLAVARNIVKREGPGALWRGMRPRVLFHTPAAAICWSTYEAGK 275 Query: 183 KFLQR 197 LQ+ Sbjct: 276 SLLQQ 280 >ref|XP_002961990.1| hypothetical protein SELMODRAFT_230023 [Selaginella moellendorffii] gi|300170649|gb|EFJ37250.1| hypothetical protein SELMODRAFT_230023 [Selaginella moellendorffii] Length = 292 Score = 93.2 bits (230), Expect = 2e-17 Identities = 43/64 (67%), Positives = 51/64 (79%) Frame = +3 Query: 3 RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182 RLQCQGVCGA +S++S+ +K+IV +EG AL +GLKPRVLFH PAAAI WSTYEA K Sbjct: 220 RLQCQGVCGATKYSTSSVTQVVKEIVRREGSAALFKGLKPRVLFHTPAAAISWSTYEAGK 279 Query: 183 KFLQ 194 FLQ Sbjct: 280 SFLQ 283