BLASTX nr result

ID: Cimicifuga21_contig00020162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020162
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16477.1| unknown [Picea sitchensis]                             108   4e-22
gb|ABK25762.1| unknown [Picea sitchensis]                             105   5e-21
ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_001785843.1| predicted protein [Physcomitrella patens sub...    94   1e-17
ref|XP_002961990.1| hypothetical protein SELMODRAFT_230023 [Sela...    93   2e-17

>gb|ABR16477.1| unknown [Picea sitchensis]
          Length = 337

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = +3

Query: 3   RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182
           RLQCQGVCGAD F+S+SI+ A++ IVAKEGP ALLRGLKPR+LFHAPAAAICWSTYEA K
Sbjct: 266 RLQCQGVCGADRFTSSSIQNAIQTIVAKEGPTALLRGLKPRMLFHAPAAAICWSTYEACK 325

Query: 183 KFL 191
            FL
Sbjct: 326 SFL 328


>gb|ABK25762.1| unknown [Picea sitchensis]
          Length = 311

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182
           RLQCQGVCGAD F+++SI   +++IV KEGP AL+RGLKPR+LFHAPAAAICWSTYEA K
Sbjct: 239 RLQCQGVCGADRFTNSSISDVVRKIVRKEGPAALMRGLKPRILFHAPAAAICWSTYEASK 298

Query: 183 KFLQRVPES 209
            FL  V ++
Sbjct: 299 TFLHNVNQA 307


>ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/70 (64%), Positives = 53/70 (75%)
 Frame = +3

Query: 3   RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182
           +LQCQGVCG D FSS+SI   +K IV K+G Q L+RG  PR+LFHAPAAAICWSTYEA K
Sbjct: 258 QLQCQGVCGCDRFSSSSIGNVIKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWSTYEASK 317

Query: 183 KFLQRVPESP 212
            F  R+  +P
Sbjct: 318 DFFHRLNGNP 327


>ref|XP_001785843.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162662497|gb|EDQ49344.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 290

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = +3

Query: 3   RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182
           RLQCQGVCGAD + ++S+    + IV +EGP AL RG++PRVLFH PAAAICWSTYEA K
Sbjct: 216 RLQCQGVCGADRYKNSSVLAVARNIVKREGPGALWRGMRPRVLFHTPAAAICWSTYEAGK 275

Query: 183 KFLQR 197
             LQ+
Sbjct: 276 SLLQQ 280


>ref|XP_002961990.1| hypothetical protein SELMODRAFT_230023 [Selaginella moellendorffii]
           gi|300170649|gb|EFJ37250.1| hypothetical protein
           SELMODRAFT_230023 [Selaginella moellendorffii]
          Length = 292

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   RLQCQGVCGADTFSSNSIRMALKQIVAKEGPQALLRGLKPRVLFHAPAAAICWSTYEAMK 182
           RLQCQGVCGA  +S++S+   +K+IV +EG  AL +GLKPRVLFH PAAAI WSTYEA K
Sbjct: 220 RLQCQGVCGATKYSTSSVTQVVKEIVRREGSAALFKGLKPRVLFHTPAAAISWSTYEAGK 279

Query: 183 KFLQ 194
            FLQ
Sbjct: 280 SFLQ 283


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