BLASTX nr result

ID: Cimicifuga21_contig00020157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020157
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276624.2| PREDICTED: uncharacterized protein LOC100259...   123   1e-26
ref|XP_002299551.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
emb|CBI34727.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002509741.1| conserved hypothetical protein [Ricinus comm...   109   2e-22
ref|XP_004147987.1| PREDICTED: uncharacterized protein LOC101213...    94   9e-18

>ref|XP_002276624.2| PREDICTED: uncharacterized protein LOC100259829 [Vitis vinifera]
          Length = 1141

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   VLFQKFVETGETKLLDDAILTIQKAQSRID-DEKQEAYMNGLVCSGGINGETVSLNLMDA 179
           VLFQ+FV T E  LL+ AIL +Q+  S  D D K+E YMN LVCS   NG+   L+L++A
Sbjct: 423 VLFQQFVGTDEATLLEYAILEVQQVLSTEDIDGKEEQYMNSLVCSRVFNGKEKKLSLVEA 482

Query: 180 IFLSISIWCDRKLNDYHQHFNQAL-NFERVLTLFILVGMLSAEESGDIKLIKSDAGAEVA 356
           IF S+SIWCD KL DYH HF++ L NF+ V+TL + VG +++ E G+IKL K++   E+A
Sbjct: 483 IFFSMSIWCDSKLLDYHLHFSKKLDNFKTVMTLALAVGFITSSEGGEIKLTKTNGLDEIA 542

Query: 357 NRHLRACIENSIKA 398
            + L+  I+ SI+A
Sbjct: 543 AKKLQTYIQKSIEA 556


>ref|XP_002299551.1| predicted protein [Populus trichocarpa] gi|222846809|gb|EEE84356.1|
            predicted protein [Populus trichocarpa]
          Length = 1373

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/129 (45%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
 Frame = +3

Query: 15   KFVETGETKLLDDAILTIQKAQSRIDDEKQEAYMNGLVCSGGINGETVSLNLMDAIFLSI 194
            KFV TG + LL++A+L +QK  S  +D+++E YMN LVC+   NG  + L+L+ +IF+SI
Sbjct: 614  KFVRTGGSVLLENAVLHLQKVLSTEEDDRKEQYMNSLVCTKQCNGSHLKLHLLQSIFVSI 673

Query: 195  SIWCDRKLNDYHQHFNQ-ALNFERVLTLFILVGMLSAEESGDIKLIKSDAGAEVANRHLR 371
            S+WCD KL DYH HF+Q   NF  +++L   VG+L+++ESGD+KL+K +A    A+R L+
Sbjct: 674  SMWCDYKLQDYHSHFSQKPYNFRMIISLVSAVGVLASDESGDLKLMKLNASDAKASRKLK 733

Query: 372  ACIENSIKA 398
            + ++ S +A
Sbjct: 734  SYVKKSTEA 742


>emb|CBI34727.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score =  116 bits (290), Expect = 2e-24
 Identities = 67/142 (47%), Positives = 93/142 (65%), Gaps = 10/142 (7%)
 Frame = +3

Query: 3   VLFQKFVETGETKLLDDAILTIQKAQSRID-DEKQEAYMNGLVCSGGINGETVSLNLMDA 179
           VLFQ+FV T E  LL+ AIL +Q+  S  D D K+E YMN LVCS   NG+   L+L++A
Sbjct: 416 VLFQQFVGTDEATLLEYAILEVQQVLSTEDIDGKEEQYMNSLVCSRVFNGKEKKLSLVEA 475

Query: 180 IFLSISIWCDRKLNDYHQHFNQAL-NFERVLTLFILVGMLSAEESGDIK--------LIK 332
           IF S+SIWCD KL DYH HF++ L NF+ V+TL + VG +++ E G+IK        L K
Sbjct: 476 IFFSMSIWCDSKLLDYHLHFSKKLDNFKTVMTLALAVGFITSSEGGEIKVKKFSYLQLTK 535

Query: 333 SDAGAEVANRHLRACIENSIKA 398
           ++   E+A + L+  I+ SI+A
Sbjct: 536 TNGLDEIAAKKLQTYIQKSIEA 557


>ref|XP_002509741.1| conserved hypothetical protein [Ricinus communis]
           gi|223549640|gb|EEF51128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1146

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   VLFQKFVETGETKLLDDAILTIQKAQSRID-DEKQEAYMNGLVCSGGINGETVSLNLMDA 179
           VLF++FVET   +LL+DA+L +QK  S  + D K+E YMN LVCS   +   V LNL  +
Sbjct: 428 VLFRQFVETDGGQLLEDAVLELQKFVSAEEADGKEEQYMNSLVCSRQCDQREVKLNLAQS 487

Query: 180 IFLSISIWCDRKLNDYHQHFNQALN-FERVLTLFILVGMLSAEESGDIKLIKSDAGAEVA 356
           I LSISIWCD  L DYH HF+Q  + F  ++TLF  VG+L+ ++ G+IKL K  A  +  
Sbjct: 488 ICLSISIWCDSTLQDYHLHFSQKPSCFRTLMTLFSAVGVLTVDDHGEIKLTKLGASDDYV 547

Query: 357 NRHLRACIENSIKA 398
           +  L++ +  S +A
Sbjct: 548 SGKLKSYVNKSTEA 561


>ref|XP_004147987.1| PREDICTED: uncharacterized protein LOC101213131 [Cucumis sativus]
          Length = 1096

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 4/136 (2%)
 Frame = +3

Query: 3   VLFQKFVETGETKLLDDAILTIQK-AQSRIDDEKQEAYMNGLVCSGGINGE--TVSLNLM 173
           VLFQ+FV+T E   LD A++ +QK A S+ ++ K+E Y+  L CS   NG    + LNL 
Sbjct: 419 VLFQQFVKTDEISFLDSAMVELQKIASSKNNEGKEEQYLESLSCSISCNGNGNEMKLNLA 478

Query: 174 DAIFLSISIWCDRKLNDYHQHF-NQALNFERVLTLFILVGMLSAEESGDIKLIKSDAGAE 350
           +A+F  IS WCD KL  YH HF  +   F +V++L  +VG++++ +   +KL + D    
Sbjct: 479 EAVFFLISSWCDIKLQAYHLHFLKKPSYFGKVVSLLSIVGVVTSYDCNTVKLTRLDGLKA 538

Query: 351 VANRHLRACIENSIKA 398
              R LR  +E SI+A
Sbjct: 539 SGTRKLRTYVERSIEA 554


Top