BLASTX nr result

ID: Cimicifuga21_contig00020149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020149
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298903.1| predicted protein [Populus trichocarpa] gi|2...    46   3e-13
ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252...    44   3e-13
ref|XP_002451861.1| hypothetical protein SORBIDRAFT_04g008850 [S...    48   6e-13
gb|ACY66874.1| P20Sh095F0 [Saccharum hybrid cultivar R570]             48   7e-13
dbj|BAI94501.1| sodium/calcium exchanger protein [Dianthus caryo...    47   9e-13

>ref|XP_002298903.1| predicted protein [Populus trichocarpa] gi|222846161|gb|EEE83708.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 46.2 bits (108), Expect(3) = 3e-13
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 12/58 (20%)
 Frame = -3

Query: 155 MAMLAGSTEHLLTLLWGTCVMVGKVDIS------VDFKFSKSWSFLG------LFTCF 18
           M +LAGST  LLT++WG+CV+VGK D+S      +D K +K +S  G      ++TC+
Sbjct: 158 MGLLAGSTVMLLTVIWGSCVVVGKCDMSETENSAIDRKDTKRFSLTGSGVSTDIWTCY 215



 Score = 44.7 bits (104), Expect(3) = 3e-13
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 316 FYGQSSFFFFRILGPGIFGATAFQILGSLTHTIIVLASGVSTSQEAAQAQV 164
           +    S    +ILGPGI G     +LG+L   +++L SG+S S E AQ+QV
Sbjct: 104 YLSSGSELLLQILGPGIIGGLFLPVLGALPDALLILVSGLSGSTETAQSQV 154



 Score = 28.5 bits (62), Expect(3) = 3e-13
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 369 IFLIVVYQYLLYLGSSYVSMDSRL 298
           +FLI+VY YL++  ++Y+S  S L
Sbjct: 88  LFLILVYGYLMFFAATYLSSGSEL 111


>ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252144 [Vitis vinifera]
          Length = 579

 Score = 44.3 bits (103), Expect(3) = 3e-13
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = -1

Query: 316 FYGQSSFFFFRILGPGIFGATAFQILGSLTHTIIVLASGVSTSQEAAQAQV 164
           +    S     ILGPG+ G     ILG+L   I++L SG+S S E AQ+QV
Sbjct: 97  YLSSGSELLLEILGPGLVGGLIVPILGALPDAILILVSGLSGSTETAQSQV 147



 Score = 43.5 bits (101), Expect(3) = 3e-13
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
 Frame = -3

Query: 155 MAMLAGSTEHLLTLLWGTCVMVGKVD----ISVDFKFSKSWSFLG 33
           M +LAGST  LLT++WG+CV+VGK D    ++ D + +K +S  G
Sbjct: 151 MGLLAGSTVILLTIMWGSCVIVGKCDLQDSVAKDLQDTKGFSLTG 195



 Score = 31.2 bits (69), Expect(3) = 3e-13
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -2

Query: 369 IFLIVVYQYLLYLGSSYVSMDSRL 298
           +FLIVVY YL++L ++Y+S  S L
Sbjct: 81  LFLIVVYGYLMFLAATYLSSGSEL 104


>ref|XP_002451861.1| hypothetical protein SORBIDRAFT_04g008850 [Sorghum bicolor]
           gi|241931692|gb|EES04837.1| hypothetical protein
           SORBIDRAFT_04g008850 [Sorghum bicolor]
          Length = 562

 Score = 47.8 bits (112), Expect(3) = 6e-13
 Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
 Frame = -3

Query: 155 MAMLAGSTEHLLTLLWGTCVMVGKVDIS-----VDFKFSKSWSFLG 33
           M +LAGST  LLTLLWG+CV+VGK D+S     +D + +K +S  G
Sbjct: 170 MGLLAGSTVMLLTLLWGSCVVVGKCDLSENSTAIDSRDTKGFSLFG 215



 Score = 43.9 bits (102), Expect(3) = 6e-13
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = -1

Query: 316 FYGQSSFFFFRILGPGIFGATAFQILGSLTHTIIVLASGVSTSQEAAQAQVV 161
           +    S    +ILGPGI G     ILG+L   +++L SG+S ++E AQ+QV+
Sbjct: 116 YLSAGSELLLQILGPGIVGGLFLPILGALPDAMLILVSGLSGTKEVAQSQVL 167



 Score = 26.6 bits (57), Expect(3) = 6e-13
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 405 FDPIVDAKSGRAIFLIVVYQYLLYLGSSYVSMDSRL 298
           F P  D   G  +FL++ Y +L++  ++Y+S  S L
Sbjct: 89  FLPCTDTAPGN-LFLVLAYGFLMFKAATYLSAGSEL 123


>gb|ACY66874.1| P20Sh095F0 [Saccharum hybrid cultivar R570]
          Length = 573

 Score = 48.1 bits (113), Expect(3) = 7e-13
 Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
 Frame = -3

Query: 155 MAMLAGSTEHLLTLLWGTCVMVGKVDI-----SVDFKFSKSWSFLG 33
           M +LAGST  LLTLLWGTCV+VGK D+     +VD   +K +S  G
Sbjct: 150 MGLLAGSTVFLLTLLWGTCVVVGKCDLGPTREAVDLTDTKGFSLTG 195



 Score = 43.9 bits (102), Expect(3) = 7e-13
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = -1

Query: 316 FYGQSSFFFFRILGPGIFGATAFQILGSLTHTIIVLASGVSTSQEAAQAQVV 161
           +    S     I+GPG+ G     ILG+L   ++VL SG+S S+E AQ+QV+
Sbjct: 96  YLSTGSELLLEIMGPGLVGGLLLPILGALPDALLVLVSGLSGSKEEAQSQVL 147



 Score = 25.8 bits (55), Expect(3) = 7e-13
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 369 IFLIVVYQYLLYLGSSYVSMDSRL 298
           +FL++ Y +L+Y  ++Y+S  S L
Sbjct: 80  LFLVLTYGFLMYKAATYLSTGSEL 103


>dbj|BAI94501.1| sodium/calcium exchanger protein [Dianthus caryophyllus]
          Length = 581

 Score = 47.0 bits (110), Expect(3) = 9e-13
 Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 4/45 (8%)
 Frame = -3

Query: 155 MAMLAGSTEHLLTLLWGTCVMVGKVDI----SVDFKFSKSWSFLG 33
           M +LAGST  LLT++WGTC+++GK D+    ++D   +K +S LG
Sbjct: 153 MGLLAGSTVMLLTVIWGTCILIGKCDMDGTEAIDLTDTKGFSLLG 197



 Score = 43.1 bits (100), Expect(3) = 9e-13
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = -1

Query: 316 FYGQSSFFFFRILGPGIFGATAFQILGSLTHTIIVLASGVSTSQEAAQAQV 164
           F    S     ILGPGI G     +LG+L   +++L SG+S S   AQ+QV
Sbjct: 99  FLSDGSELLLEILGPGIVGGLFLPVLGALPDAMLILVSGISGSTSEAQSQV 149



 Score = 27.3 bits (59), Expect(3) = 9e-13
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -2

Query: 369 IFLIVVYQYLLYLGSSYVSMDSRL 298
           +FLI VY YL+YL ++++S  S L
Sbjct: 83  MFLIGVYGYLMYLAATFLSDGSEL 106