BLASTX nr result

ID: Cimicifuga21_contig00020122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020122
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283174.1| PREDICTED: uncharacterized protein LOC100248...   103   5e-20
ref|XP_002298342.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_004143129.1| PREDICTED: uncharacterized protein LOC101205...    84   4e-14
ref|XP_002520535.1| conserved hypothetical protein [Ricinus comm...    79   8e-13
gb|ABW81163.1| unknown [Capsella rubella]                              76   7e-12

>ref|XP_002283174.1| PREDICTED: uncharacterized protein LOC100248460 [Vitis vinifera]
           gi|297746039|emb|CBI16095.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  103 bits (256), Expect = 5e-20
 Identities = 64/155 (41%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
 Frame = +3

Query: 108 LFSQKRRTSLNFNNSSFQIXXXXXXXXXXXXQRTNFTQIPPQKTLQNNNRVWRISVTSED 287
           +F+ K   SL+ +NSS               ++T     PP    Q + ++WRIS  SED
Sbjct: 18  IFNSKPPNSLHIHNSSLPFIPLLALRTTTPRKKTINFHHPPHAIPQKSTQLWRISAVSED 77

Query: 288 VLPSEA-PIETAQQIISANNGDGVSTIISTLLFIAFAGLSILTIGVIYIAVTDFLQXXXX 464
            LPSE  P+E +QQI+S ++ +GVST+IS LLF+AF  L+ILTIGVIYIAV+DFLQ    
Sbjct: 78  ALPSEVTPLENSQQIVSTSD-EGVSTVISALLFVAFVALTILTIGVIYIAVSDFLQ--KR 134

Query: 465 XXXXXXXXXXXXXXXXXXXXXXXXXGPRGFGQKIE 569
                                    GPRGFGQKI+
Sbjct: 135 EKEKFEKEESAKKKNGKKRKVRARAGPRGFGQKID 169


>ref|XP_002298342.1| predicted protein [Populus trichocarpa] gi|222845600|gb|EEE83147.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  100 bits (249), Expect = 3e-19
 Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = +3

Query: 216 TQIPPQKTLQNNNRVWRISVTSEDVLPSEA-PIETAQQIISANNGDGVSTIISTLLFIAF 392
           T +  Q+  + + ++W+I  T E+VLPS+  P+E+ QQ++S  N DGV TIIS LLF+AF
Sbjct: 78  TVLYKQEIHRRSTQIWKIKATPEEVLPSDTTPLESTQQMLSTTNDDGVGTIISALLFVAF 137

Query: 393 AGLSILTIGVIYIAVTDFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRGFGQKIEM 572
           A LSILTIG+IY+ VTDFLQ                             GPRGFGQKI  
Sbjct: 138 AALSILTIGIIYLGVTDFLQ-KRETDKLQKEEESKKKKRVKKRKVRARSGPRGFGQKINE 196

Query: 573 DDE 581
           DDE
Sbjct: 197 DDE 199


>ref|XP_004143129.1| PREDICTED: uncharacterized protein LOC101205908 [Cucumis sativus]
           gi|449496669|ref|XP_004160194.1| PREDICTED:
           uncharacterized protein LOC101223634 [Cucumis sativus]
          Length = 176

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 54/124 (43%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
 Frame = +3

Query: 225 PPQKTLQNNNRVWRI-SVTSEDVLPSEAPI----ETAQQIISANNGDGVSTIISTLLFIA 389
           P ++  Q    + RI + TS+  LPS++      E +Q+I+ + N DGVSTIIS LLF A
Sbjct: 49  PLRQNRQKQLSISRIHAATSQQTLPSDSAALLAAEKSQEIVGSTNDDGVSTIISVLLFTA 108

Query: 390 FAGLSILTIGVIYIAVTDFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRGFGQKIE 569
           F GLSILTIGVIYI VTDFLQ                             GPRGFGQK+E
Sbjct: 109 FIGLSILTIGVIYIGVTDFLQ-KREKEKFEKEEAGKKKKSGKKKKVRARGGPRGFGQKVE 167

Query: 570 MDDE 581
            ++E
Sbjct: 168 GEEE 171


>ref|XP_002520535.1| conserved hypothetical protein [Ricinus communis]
           gi|223540377|gb|EEF41948.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
 Frame = +3

Query: 207 TNFTQIPPQKTLQNNNRVWRISVTSEDVLPSE-APIETAQQIISANNGDGVSTIISTLLF 383
           T FT        Q   ++WR+    E+ LPS+ A +E+AQ+I +A + D  + IIS LLF
Sbjct: 40  TPFTTKRATILFQRRTQIWRLYAAPEEALPSDTAALESAQKI-AATSDDPTANIISLLLF 98

Query: 384 IAFAGLSILTIGVIYIAVTDFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRGFGQK 563
           IAF  L+ILT+GVIY+ VTDFL                              GPRGFGQK
Sbjct: 99  IAFVVLAILTVGVIYLGVTDFLGKREKEKFEKEEAAKKKKKGGKKGKVRARTGPRGFGQK 158

Query: 564 IEMDDE 581
           I+ +D+
Sbjct: 159 IKEEDD 164


>gb|ABW81163.1| unknown [Capsella rubella]
          Length = 170

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
 Frame = +3

Query: 219 QIPPQKTL----QNNNRVWRISVTSEDVLPS--EAPIETAQQIISANNGDGVSTIISTLL 380
           +I P K L    +   ++WR+S T E++      +   +++ I+S+ + DGV+ II  LL
Sbjct: 38  KILPSKVLRLHQEKKTQLWRVSATPEEISKEIVSSDSSSSEAIVSSGDPDGVALIIQVLL 97

Query: 381 FIAFAGLSILTIGVIYIAVTDFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRGFGQ 560
           F+AF  L++LTIGV+YI VT+FL                              GPRGFGQ
Sbjct: 98  FVAFLVLTVLTIGVVYIGVTEFLGKKESEKFEKEEAAKRSKKGGKKKAMRARAGPRGFGQ 157

Query: 561 KIEMDD 578
           KIE DD
Sbjct: 158 KIEDDD 163


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