BLASTX nr result

ID: Cimicifuga21_contig00020118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020118
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putat...   313   2e-83
ref|XP_004157500.1| PREDICTED: chaperone activity of bc1 complex...   312   4e-83
ref|XP_004142376.1| PREDICTED: chaperone activity of bc1 complex...   312   4e-83
emb|CAN70923.1| hypothetical protein VITISV_018909 [Vitis vinifera]   311   1e-82
ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex...   307   1e-81

>ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223545639|gb|EEF47143.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 620

 Score =  313 bits (802), Expect = 2e-83
 Identities = 164/214 (76%), Positives = 182/214 (85%), Gaps = 4/214 (1%)
 Frame = -3

Query: 632 ATSIVPMKKRTLRERRVPSTPFTRXXXXXXXXXXXAWGTIQESAKRIVYGNPDPEYK--- 462
           A  +  +K+R  RERRVPSTPFTR           AWGT QESA+R+VYG P+ + K   
Sbjct: 154 AAPMTEVKRRKPRERRVPSTPFTRALGFAGLGAGLAWGTFQESARRLVYGAPNSQDKQSA 213

Query: 461 -SPVLSEQNAQRLALALCRMRGAALKVGQMLSIQDESLVPAPILAAFDIVRQGADVMPRS 285
            SP LSE+NA+RLALALCRMRGAALK+GQMLSIQDESLVPAPILAA DIVRQGADVMPRS
Sbjct: 214 LSPFLSERNAERLALALCRMRGAALKLGQMLSIQDESLVPAPILAALDIVRQGADVMPRS 273

Query: 284 QLNQVLDAELGTNWTSKLQSFDYEPMAAASIGQVHRAVTKDGFQVAMKIQYPGVADSIRS 105
           QLNQVLDAELG +W++KL SFDYEP+AAASIGQVHRAVTKDG QVAMKIQYPGVA+SI S
Sbjct: 274 QLNQVLDAELGPDWSTKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIQYPGVANSINS 333

Query: 104 DIKNVKLLLDYTNLIPKGLYLDRAMKVAEEELSR 3
           D+ NVKLLLDYTNLIPKGL+LDRAMKVA+EELSR
Sbjct: 334 DVDNVKLLLDYTNLIPKGLFLDRAMKVAKEELSR 367


>ref|XP_004157500.1| PREDICTED: chaperone activity of bc1 complex-like,
           mitochondrial-like [Cucumis sativus]
          Length = 603

 Score =  312 bits (800), Expect = 4e-83
 Identities = 163/209 (77%), Positives = 181/209 (86%), Gaps = 4/209 (1%)
 Frame = -3

Query: 617 PMKKRTLRERRVPSTPFTRXXXXXXXXXXXAWGTIQESAKRIVYGNPD----PEYKSPVL 450
           P+K+RT RERRVPSTPF+R           AWGT+QESAKR+V+G+ +    P   SP L
Sbjct: 153 PLKRRTPRERRVPSTPFSRALGFAGLGAGLAWGTLQESAKRLVFGSENLQNQPSALSPFL 212

Query: 449 SEQNAQRLALALCRMRGAALKVGQMLSIQDESLVPAPILAAFDIVRQGADVMPRSQLNQV 270
           SE+NA+RLALALCRMRGAALK+GQMLSIQDESLVPAPILAA DIVRQGADVMPRSQLNQV
Sbjct: 213 SEKNAERLALALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRSQLNQV 272

Query: 269 LDAELGTNWTSKLQSFDYEPMAAASIGQVHRAVTKDGFQVAMKIQYPGVADSIRSDIKNV 90
           L+AELG +W+SKL SFDYEPMAAASIGQVHRAV+KDG  VAMKIQYPGVADSI SDI NV
Sbjct: 273 LNAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDGMNVAMKIQYPGVADSIESDIDNV 332

Query: 89  KLLLDYTNLIPKGLYLDRAMKVAEEELSR 3
           KLLLDYTNLIPKGLYLDRA+KVA++ELSR
Sbjct: 333 KLLLDYTNLIPKGLYLDRAIKVAKDELSR 361


>ref|XP_004142376.1| PREDICTED: chaperone activity of bc1 complex-like,
           mitochondrial-like [Cucumis sativus]
          Length = 603

 Score =  312 bits (800), Expect = 4e-83
 Identities = 163/209 (77%), Positives = 181/209 (86%), Gaps = 4/209 (1%)
 Frame = -3

Query: 617 PMKKRTLRERRVPSTPFTRXXXXXXXXXXXAWGTIQESAKRIVYGNPD----PEYKSPVL 450
           P+K+RT RERRVPSTPF+R           AWGT+QESAKR+V+G+ +    P   SP L
Sbjct: 153 PLKRRTPRERRVPSTPFSRALGFAGLGAGLAWGTLQESAKRLVFGSENLQNQPSALSPFL 212

Query: 449 SEQNAQRLALALCRMRGAALKVGQMLSIQDESLVPAPILAAFDIVRQGADVMPRSQLNQV 270
           SE+NA+RLALALCRMRGAALK+GQMLSIQDESLVPAPILAA DIVRQGADVMPRSQLNQV
Sbjct: 213 SEKNAERLALALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRSQLNQV 272

Query: 269 LDAELGTNWTSKLQSFDYEPMAAASIGQVHRAVTKDGFQVAMKIQYPGVADSIRSDIKNV 90
           L+AELG +W+SKL SFDYEPMAAASIGQVHRAV+KDG  VAMKIQYPGVADSI SDI NV
Sbjct: 273 LNAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDGMNVAMKIQYPGVADSIESDIDNV 332

Query: 89  KLLLDYTNLIPKGLYLDRAMKVAEEELSR 3
           KLLLDYTNLIPKGLYLDRA+KVA++ELSR
Sbjct: 333 KLLLDYTNLIPKGLYLDRAIKVAKDELSR 361


>emb|CAN70923.1| hypothetical protein VITISV_018909 [Vitis vinifera]
          Length = 622

 Score =  311 bits (796), Expect = 1e-82
 Identities = 162/224 (72%), Positives = 187/224 (83%), Gaps = 4/224 (1%)
 Frame = -3

Query: 662 PPTVKNDDNQATSIVPMKKRTLRERRVPSTPFTRXXXXXXXXXXXAWGTIQESAKRIVYG 483
           P  V++ + Q ++ V +K+R  RERRVPSTPF+R           AWGTIQESAKRIV+G
Sbjct: 96  PERVQDSNAQQSANVVVKRRKPRERRVPSTPFSRALGFAGLGVGIAWGTIQESAKRIVFG 155

Query: 482 NPDPEYK----SPVLSEQNAQRLALALCRMRGAALKVGQMLSIQDESLVPAPILAAFDIV 315
            P+ + K    SP LSE+NA+RLAL LCRMRGAALK+GQMLSIQDE+LVPAPILAA D+V
Sbjct: 156 TPNSQDKQSAVSPFLSEKNAERLALGLCRMRGAALKLGQMLSIQDETLVPAPILAALDVV 215

Query: 314 RQGADVMPRSQLNQVLDAELGTNWTSKLQSFDYEPMAAASIGQVHRAVTKDGFQVAMKIQ 135
           RQGADVMP+ QL+QVLDAELG  W SKL SFDYEP+AAASIGQVH+AVTKDG +VAMKIQ
Sbjct: 216 RQGADVMPKKQLSQVLDAELGPEWKSKLTSFDYEPLAAASIGQVHKAVTKDGLEVAMKIQ 275

Query: 134 YPGVADSIRSDIKNVKLLLDYTNLIPKGLYLDRAMKVAEEELSR 3
           YPGVADSI SDI+NVKLLLDYTNLIP+GLYLD+AMKVA+EELSR
Sbjct: 276 YPGVADSIESDIENVKLLLDYTNLIPEGLYLDKAMKVAKEELSR 319


>ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial
           [Vitis vinifera] gi|297744068|emb|CBI37038.3| unnamed
           protein product [Vitis vinifera]
          Length = 583

 Score =  307 bits (787), Expect = 1e-81
 Identities = 160/220 (72%), Positives = 184/220 (83%), Gaps = 4/220 (1%)
 Frame = -3

Query: 650 KNDDNQATSIVPMKKRTLRERRVPSTPFTRXXXXXXXXXXXAWGTIQESAKRIVYGNPDP 471
           +++D+     V +K+R  RERRVPSTPF+R           AWGTIQESAKRIV+G P+ 
Sbjct: 112 ESEDSGGNVDVVVKRRKPRERRVPSTPFSRALGFAGLGVGIAWGTIQESAKRIVFGTPNS 171

Query: 470 EYK----SPVLSEQNAQRLALALCRMRGAALKVGQMLSIQDESLVPAPILAAFDIVRQGA 303
           + K    SP LSE+NA+RLAL LCRMRGAALK+GQMLSIQDE+LVPAPILAA D+VRQGA
Sbjct: 172 QDKQSAVSPFLSEKNAERLALGLCRMRGAALKLGQMLSIQDETLVPAPILAALDVVRQGA 231

Query: 302 DVMPRSQLNQVLDAELGTNWTSKLQSFDYEPMAAASIGQVHRAVTKDGFQVAMKIQYPGV 123
           DVMP+ QL+QVLDAELG  W SKL SFDYEP+AAASIGQVH+AVTKDG +VAMKIQYPGV
Sbjct: 232 DVMPKKQLSQVLDAELGPEWKSKLTSFDYEPLAAASIGQVHKAVTKDGLEVAMKIQYPGV 291

Query: 122 ADSIRSDIKNVKLLLDYTNLIPKGLYLDRAMKVAEEELSR 3
           ADSI SDI+NVKLLLDYTNLIP+GLYLD+AMKVA+EELSR
Sbjct: 292 ADSIESDIENVKLLLDYTNLIPEGLYLDKAMKVAKEELSR 331


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