BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020117
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   257   7e-67
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   255   3e-66
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   239   2e-61
ref|NP_201237.1| pentatricopeptide repeat-containing protein [Ar...   233   1e-59

>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  257 bits (657), Expect = 7e-67
 Identities = 122/178 (68%), Positives = 147/178 (82%)
 Frame = +3

Query: 15  NNTCSSYTTGVQCENEWEKVLRPFDLEELRNSLNGITPLQLYQFLALPLDVPTSLEIFNW 194
           N+T  + T G+    EWE++L+PFDL ELR SL  ITP QL + L LPLDVPTS+E+F W
Sbjct: 41  NDTVFNNTNGLDSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQW 100

Query: 195 ARTQLGYSHSFDVYYVLIDKLGASGKFKVIDGLLLQMKEEEIVFREDLFIMIMKWYGRAG 374
           A TQ GY H FDVYY+LIDKLGA+G+FK ID LL+QMK+E IVFRE LFI+IMK YGRAG
Sbjct: 101 AGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAG 160

Query: 375 LPGQATRLLKEMKDVFACEPTFKSYNVVLEILVEGKCPQVAPNVFYEMLSKGISPTVF 548
           LPGQATRLL +M+ V++CEPTF+SYNVVL++L+ G CP+V PNVFYEMLSKGISPTV+
Sbjct: 161 LPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVY 218


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  255 bits (652), Expect = 3e-66
 Identities = 121/178 (67%), Positives = 146/178 (82%)
 Frame = +3

Query: 15  NNTCSSYTTGVQCENEWEKVLRPFDLEELRNSLNGITPLQLYQFLALPLDVPTSLEIFNW 194
           N+T  + T G+    EWE++L+PFDL ELR SL  ITP QL + L LPLDVPTS+E+F W
Sbjct: 59  NDTVFNNTNGLDSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQW 118

Query: 195 ARTQLGYSHSFDVYYVLIDKLGASGKFKVIDGLLLQMKEEEIVFREDLFIMIMKWYGRAG 374
           A TQ GY H FDVYY+LIDKLGA+G+FK  D LL+QMK+E IVFRE LFI+IMK YGRAG
Sbjct: 119 AGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAG 178

Query: 375 LPGQATRLLKEMKDVFACEPTFKSYNVVLEILVEGKCPQVAPNVFYEMLSKGISPTVF 548
           LPGQATRLL +M+ V++CEPTF+SYNVVL++L+ G CP+V PNVFYEMLSKGISPTV+
Sbjct: 179 LPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVY 236


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/162 (72%), Positives = 135/162 (83%)
 Frame = +3

Query: 54  ENEWEKVLRPFDLEELRNSLNGITPLQLYQFLALPLDVPTSLEIFNWARTQLGYSHSFDV 233
           E EWE++L+PFDL+ELR S N ITP QL + L LPLDV TS+EIF WA  Q GY HSF V
Sbjct: 47  ETEWERLLKPFDLKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSV 106

Query: 234 YYVLIDKLGASGKFKVIDGLLLQMKEEEIVFREDLFIMIMKWYGRAGLPGQATRLLKEMK 413
           YY+LIDKLGA+  FKVID LLLQMKEE IVFRE LFI+IMK+YGRAGLPGQATRLL +MK
Sbjct: 107 YYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMK 166

Query: 414 DVFACEPTFKSYNVVLEILVEGKCPQVAPNVFYEMLSKGISP 539
            V+ CEP+F+SYNVVL++LV G CP VA NVFY+MLSKG+SP
Sbjct: 167 GVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSP 208


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  239 bits (610), Expect = 2e-61
 Identities = 116/165 (70%), Positives = 135/165 (81%)
 Frame = +3

Query: 54  ENEWEKVLRPFDLEELRNSLNGITPLQLYQFLALPLDVPTSLEIFNWARTQLGYSHSFDV 233
           E EWE++L+PFDL+ELR S N ITP QL + L LPLDV TS+ IF WA +Q GY H+FDV
Sbjct: 45  ETEWERLLKPFDLKELRRSFNQITPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDV 104

Query: 234 YYVLIDKLGASGKFKVIDGLLLQMKEEEIVFREDLFIMIMKWYGRAGLPGQATRLLKEMK 413
           Y+VLIDKLGA+ +FKVID LLLQ+KEE I FRE LFI IMK+YGRA LPGQATR+L +MK
Sbjct: 105 YHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMK 164

Query: 414 DVFACEPTFKSYNVVLEILVEGKCPQVAPNVFYEMLSKGISPTVF 548
            V+ CEPTFKSYNVVL+ILV   CP VA NVFYEMLSKG+ PTV+
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVY 209


>ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
           gi|9759408|dbj|BAB09863.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010486|gb|AED97869.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 730

 Score =  233 bits (595), Expect = 1e-59
 Identities = 113/182 (62%), Positives = 140/182 (76%)
 Frame = +3

Query: 3   GSDNNNTCSSYTTGVQCENEWEKVLRPFDLEELRNSLNGITPLQLYQFLALPLDVPTSLE 182
           G D+    S    G    NEWEK+L+PFDL+ LRNS + ITP QLY+ L LPL+V TS+E
Sbjct: 37  GGDDGGGSSPEIGGTDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSME 96

Query: 183 IFNWARTQLGYSHSFDVYYVLIDKLGASGKFKVIDGLLLQMKEEEIVFREDLFIMIMKWY 362
           +F+W  +Q GY HSFDVY VLI KLGA+G+FK ID LL+QMK+E IVF+E LFI IM+ Y
Sbjct: 97  LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY 156

Query: 363 GRAGLPGQATRLLKEMKDVFACEPTFKSYNVVLEILVEGKCPQVAPNVFYEMLSKGISPT 542
            +AG PGQ TRL+ EM++V++CEPTFKSYNVVLEILV G C +VA NVFY+MLS+ I PT
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPT 216

Query: 543 VF 548
           +F
Sbjct: 217 LF 218