BLASTX nr result

ID: Cimicifuga21_contig00020116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020116
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252...    80   1e-12
ref|XP_002312595.1| predicted protein [Populus trichocarpa] gi|2...    70   9e-10
ref|XP_002528375.1| conserved hypothetical protein [Ricinus comm...    69   3e-09
ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783...    68   5e-09
ref|XP_003535998.1| PREDICTED: uncharacterized protein LOC100806...    68   5e-09

>ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252766 [Vitis vinifera]
           gi|296083714|emb|CBI23703.3| unnamed protein product
           [Vitis vinifera]
          Length = 92

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 41/71 (57%), Positives = 46/71 (64%)
 Frame = -3

Query: 704 NPNNCNNKALDSLDSXXXXXXXXXXXXXXELTSLLPPRRGGMSKKPKKARRKVQWNDRTG 525
           +P NC NK L +LDS                 SLLPPRRGGMS++  K RRKVQWNDR G
Sbjct: 5   DPINCTNKPLVALDSPKIENRDDGEDSES--NSLLPPRRGGMSRRQDKVRRKVQWNDRNG 62

Query: 524 NKLVEILEFQP 492
           NKLVE+LEFQP
Sbjct: 63  NKLVEVLEFQP 73


>ref|XP_002312595.1| predicted protein [Populus trichocarpa] gi|222852415|gb|EEE89962.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 608 SLLPPRRGGMSKKPKKARRKVQWNDRTGNKLVEILEFQP 492
           +LLPPR+GGMS+ P K RRKVQWND  GNKLVEILEF+P
Sbjct: 42  ALLPPRKGGMSRSPNKVRRKVQWNDNNGNKLVEILEFEP 80


>ref|XP_002528375.1| conserved hypothetical protein [Ricinus communis]
           gi|223532243|gb|EEF34047.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 36/74 (48%), Positives = 44/74 (59%)
 Frame = -3

Query: 713 MDTNPNNCNNKALDSLDSXXXXXXXXXXXXXXELTSLLPPRRGGMSKKPKKARRKVQWND 534
           MDTN     NK L ++DS              E  +LLPPR GGMS+ P++ RRKVQWND
Sbjct: 6   MDTN--GFTNKPLMTVDSEKVENHSDDREDYSESNTLLPPRTGGMSRNPERVRRKVQWND 63

Query: 533 RTGNKLVEILEFQP 492
             GNKL E+L F+P
Sbjct: 64  NNGNKLAEVLVFEP 77


>ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783330 [Glycine max]
          Length = 98

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 608 SLLPPRRGGMSKKPKKARRKVQWNDRTGNKLVEILEFQP 492
           SLLPPRRGGMS+  +K RRKVQWNDR GNKL E+LE++P
Sbjct: 41  SLLPPRRGGMSRNCEKTRRKVQWNDRNGNKLAEVLEYEP 79


>ref|XP_003535998.1| PREDICTED: uncharacterized protein LOC100806080 isoform 2 [Glycine
           max]
          Length = 94

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 608 SLLPPRRGGMSKKPKKARRKVQWNDRTGNKLVEILEFQP 492
           SLLPPRRGGMS+  +K RRKVQWNDR GNKL E+LE++P
Sbjct: 41  SLLPPRRGGMSRNCEKTRRKVQWNDRNGNKLAEVLEYEP 79


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