BLASTX nr result

ID: Cimicifuga21_contig00020107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020107
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|XP_002528498.1| transcription factor, putative [Ricinus comm...    78   2e-12
ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|2...    76   6e-12
ref|XP_002329703.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
emb|CBI28638.3| unnamed protein product [Vitis vinifera]               74   3e-11

>ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|222848199|gb|EEE85746.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
 Frame = -1

Query: 269 MPLEGMFVDSCSMPAPDLSLHISPPN-SAPSSFCNSNHESDA----AGFDVWKRGDGSFK 105
           MPLEG+F++  S P PDLSLHISPPN S+PSS CN  + + +    A F++  R + + K
Sbjct: 1   MPLEGVFIEPSSNPVPDLSLHISPPNISSPSSLCNKKNNNISNKVDASFNLLGRQEATHK 60

Query: 104 CNSDSSVRSERQAYTELSLANLASGSLEVDSRLR 3
            N+ SS+RS+ QAY ELSLA+  +G  E   R R
Sbjct: 61  PNTVSSMRSDSQAYIELSLAHPTTGLDEESRRSR 94


>ref|XP_002528498.1| transcription factor, putative [Ricinus communis]
           gi|223532058|gb|EEF33867.1| transcription factor,
           putative [Ricinus communis]
          Length = 441

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
 Frame = -1

Query: 269 MPLEGMFVDSCSMPAPDLSLHISPPNSAPSSFCNS---NHES--DAAGFDVWKRGDGSFK 105
           MPLEG+F++  S P PDLSLHISPPN++ SS CN+   N++S  D  GF++  R +G   
Sbjct: 1   MPLEGVFIEPSSNPVPDLSLHISPPNTSSSSVCNNSIINNKSTTDTTGFNLLSRQEGIHN 60

Query: 104 CNSDSSVRSERQAYTELSLANLASGSLEVDSRLR 3
             S +S+R + QAYTELSLA+ A+ ++ VD   R
Sbjct: 61  LKS-NSMRIDSQAYTELSLAHPATTNV-VDDETR 92


>ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|222844638|gb|EEE82185.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -1

Query: 269 MPLEGMFVDSCSMPAPDLSLHISPPN-SAPSSFCNSN---HESDAAGFDVWKRGDGSFKC 102
           MPLEG+F++  S P PDLSLHISPPN S+PSS CN+N    +   A F++  R +   K 
Sbjct: 1   MPLEGVFIEPSSNPVPDLSLHISPPNISSPSSICNNNSNIRDKIDASFNLLGRQEAIRKS 60

Query: 101 NSDSSVRSERQAYTELSLANLASGSLEVDSRLR 3
           N+  S+RS+ QA  ELSLA+  +G  E   R R
Sbjct: 61  NTAISMRSDSQACIELSLAHPTTGLNEESIRSR 93


>ref|XP_002329703.1| predicted protein [Populus trichocarpa] gi|222870611|gb|EEF07742.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 MPLEGMFVDSCSMPAPDLSLHISPPNSAPSSFCNSNHESDAAGFDVWKRGDGSFKCNSDS 90
           M  +G+F        PDLSLHIS PNSAPSS C   ++ D+A FD+W++ DG  K +SDS
Sbjct: 1   MSQKGIFDKQSLNLIPDLSLHISLPNSAPSSICTGTNDGDSA-FDIWRKDDGLIKSHSDS 59

Query: 89  SVRSERQ-AYTELSLAN-LASGSLEVDSRLR 3
           S+R   Q + TELSLAN  ++ +LE +S  R
Sbjct: 60  SIRVGSQISDTELSLANPTSTAALEAESPWR 90


>emb|CBI28638.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = -1

Query: 269 MPLEGMFVDSCSMPAPDLSLHISPPN--SAPSSFCNSNHESDAAGFDVWKRGDGSFKCNS 96
           MPLEG+F++  S P PDLSLHISPPN  S+P+S CN +     +  ++  +   + K +S
Sbjct: 1   MPLEGVFIEPSSNPVPDLSLHISPPNNTSSPTSICNISSNEGGSNTNLLGQCQ-ALKSDS 59

Query: 95  DSSVRSERQAYTELSLANLAS 33
           ++SVRS  QAYTELSLA+ A+
Sbjct: 60  NTSVRSNLQAYTELSLAHAAN 80


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