BLASTX nr result

ID: Cimicifuga21_contig00020097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020097
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis...    63   8e-08
ref|XP_003105981.1| CRE-PQN-29 protein [Caenorhabditis remanei] ...    59   1e-06
gb|EGB12627.1| hypothetical protein AURANDRAFT_70522 [Aureococcu...    56   7e-06

>ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis]
            gi|223525980|gb|EEF28368.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1547

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 23/178 (12%)
 Frame = +3

Query: 294  WNNDQSNSW--KRNNSWG------HSSHGTE---GNTSHGDGGDAKANSWKSGAVDAGES 440
            W+NDQ+  W  K N SWG      + SHG +   G +   D    K  +W S + D+G +
Sbjct: 1083 WSNDQAGGWGKKPNTSWGDNGPGWNKSHGADAKIGESKSHDSEWGKKGNWNSASGDSGGN 1142

Query: 441  KSSDWGGTSR---GALDADGNKSSGWGSGAVDAXXXXXXXXXXXXXXTPKDSGGNESSDW 611
              S WG  S    G+ + DGN+ SGWG+ +                   + SG  + S+W
Sbjct: 1143 AGSSWGKKSNWNSGSNNGDGNQDSGWGNKS---------SLNLESGDANQSSGWGKKSNW 1193

Query: 612  NKGALDAXXXXXXXXXXXXXXXTPKDSGGNQSL---------DWNEGKNSSGAVDAGG 758
            N  + D                +   SG +QS           W  G    G  D GG
Sbjct: 1194 NSSSGDGQGSSGWGKKNSWNQDSFTASGEDQSEVSGDRAGGGSWRGGFRGRGGSDRGG 1251


>ref|XP_003105981.1| CRE-PQN-29 protein [Caenorhabditis remanei]
           gi|308254555|gb|EFO98507.1| CRE-PQN-29 protein
           [Caenorhabditis remanei]
          Length = 553

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 3/165 (1%)
 Frame = +3

Query: 276 GSPSFGWNN-DQSNSWKRNNSWGHSSHGTEGNTSHGDGGDAK--ANSWKSGAVDAGESKS 446
           G    GWNN + +N+  RNN   +++HG    T+  D  ++K   NSW+      G   +
Sbjct: 222 GDNDDGWNNYNSNNNGNRNNKNSNNNHGNSWGTNDNDNENSKNNGNSWQG---SGGNGNN 278

Query: 447 SDWGGTSRGALDADGNKSSGWGSGAVDAXXXXXXXXXXXXXXTPKDSGGNESSDWNKGAL 626
            +WGG         GN+ S   SG+ +                  + G N S++WN G+ 
Sbjct: 279 ENWGGQGGDGDSNYGNEGSWKPSGSGNNYGRNRGNGGDEWGSNNNNDGDNLSNNWNGGSS 338

Query: 627 DAXXXXXXXXXXXXXXXTPKDSGGNQSLDWNEGKNSSGAVDAGGN 761
                               +SGG+    WN G N  G  D  G+
Sbjct: 339 GGSGNGDNDNWGSNGNNGNSNSGGS----WNNGGNGGGGNDNWGS 379


>gb|EGB12627.1| hypothetical protein AURANDRAFT_70522 [Aureococcus anophagefferens]
          Length = 2743

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 42/175 (24%), Positives = 72/175 (41%)
 Frame = +3

Query: 237 NEDHENSQNATEFGSPSFGWNNDQSNSWKRNNSWGHSSHGTEGNTSHGDGGDAKANSWKS 416
           ++D   S ++ + G  S+  N+D   S+  N+    +S+   G+ S+ DG  A  +   S
Sbjct: 50  SDDGGTSYSSNDDGGTSYSSNDDGGTSYSSNDDGSSASNDDGGSASNDDGSSASNDDGGS 109

Query: 417 GAVDAGESKSSDWGGTSRGALDADGNKSSGWGSGAVDAXXXXXXXXXXXXXXTPKDSGGN 596
            + D G S S+D GGTS  + D  G+ S+  G  A +               +  D GG+
Sbjct: 110 ASNDDGSSASNDDGGTSYSSNDDGGSASNDDGGSASN--------DDGGTSYSSNDDGGS 161

Query: 597 ESSDWNKGALDAXXXXXXXXXXXXXXXTPKDSGGNQSLDWNEGKNSSGAVDAGGN 761
            S+D    +  +                  D GG+     ++G +  G  D GG+
Sbjct: 162 ASNDDGGTSYSSNDDGGSAGDDGGSVVANDDGGGSYGGGSDDGGSYGGGSDDGGS 216


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