BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020094
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-...    67   7e-18
ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...    67   3e-17
ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|...    67   6e-16
ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...    64   5e-15
ref|XP_003529944.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...    57   3e-13

>ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera]
           gi|297745280|emb|CBI40360.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score = 67.0 bits (162), Expect(2) = 7e-18
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 25/97 (25%)
 Frame = +2

Query: 203 KCYFACEALNEKIYAIGGVGSI-----------------------HVQAPTKTLFWILKS 313
           +CYFACE LN KIYAIGG+GS                        ++    +    + + 
Sbjct: 161 RCYFACEVLNGKIYAIGGLGSKSNDPHSWDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEK 220

Query: 314 IYIRCGAPSTIPT--RVVY*PSNGTWQHADEDMMSGW 418
           IYIRCG          VVY PS+GTWQHAD DM+ GW
Sbjct: 221 IYIRCGTSGLTSHVYAVVYNPSHGTWQHADADMVLGW 257



 Score = 48.9 bits (115), Expect(2) = 7e-18
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +1

Query: 415 LDET*GTRVMMWWKESREWVALGRLSRLPTC 507
           LD+  GTR+MMW KESR+WVA+GRLS L TC
Sbjct: 271 LDQRLGTRLMMWQKESRKWVAVGRLSPLLTC 301


>ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein
           SKIP4-like [Vitis vinifera]
          Length = 359

 Score = 67.4 bits (163), Expect(2) = 3e-17
 Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 26/98 (26%)
 Frame = +2

Query: 203 KCYFACEALNEKIYAIGGVGSI-----------------------HVQAPTKTLFWILKS 313
           +CYFACE LN KIYAIGG+GS                        ++    +    + + 
Sbjct: 161 RCYFACEVLNGKIYAIGGLGSKSNDPHSWDTYNPHTNSWKSHSDPNIVPDIEDTIVLDEK 220

Query: 314 IYIRCGAPSTIPTRV---VY*PSNGTWQHADEDMMSGW 418
           IYIRCG  S + + V   VY PS+GTWQHAD DM+ GW
Sbjct: 221 IYIRCGT-SALTSHVYVVVYNPSHGTWQHADADMVLGW 257



 Score = 46.6 bits (109), Expect(2) = 3e-17
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +1

Query: 415 LDET*GTRVMMWWKESREWVALGRLSRLPTC 507
           LD+  GTR+MMW KES +WVA+GRLS L TC
Sbjct: 271 LDQRLGTRLMMWQKESTKWVAVGRLSPLLTC 301


>ref|XP_002511850.1| Protein AFR, putative [Ricinus communis]
           gi|223549030|gb|EEF50519.1| Protein AFR, putative
           [Ricinus communis]
          Length = 353

 Score = 67.0 bits (162), Expect(2) = 6e-16
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 25/97 (25%)
 Frame = +2

Query: 203 KCYFACEALNEKIYAIGGVGS-----------------------IHVQAPTKTLFWILKS 313
           +CYFACE ++ KIYAIGG+GS                        ++    +    +   
Sbjct: 155 RCYFACEVMDGKIYAIGGLGSKLSDPHSWDTFDAHKNCWESHSDANIVPDVEDSIVLDGK 214

Query: 314 IYIRCGAPSTIPT--RVVY*PSNGTWQHADEDMMSGW 418
           IYIRCGA S       V+Y P NGTWQHAD DM SGW
Sbjct: 215 IYIRCGASSVSSHVYAVLYEPLNGTWQHADVDMASGW 251



 Score = 42.4 bits (98), Expect(2) = 6e-16
 Identities = 18/30 (60%), Positives = 25/30 (83%)
 Frame = +1

Query: 415 LDET*GTRVMMWWKESREWVALGRLSRLPT 504
           LD++ GTR+M+W K+ REW+A+GRLS L T
Sbjct: 265 LDQSSGTRLMIWRKDKREWMAVGRLSSLLT 294


>ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score = 63.9 bits (154), Expect(2) = 5e-15
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 25/98 (25%)
 Frame = +2

Query: 203 KCYFACEALNEKIYAIGGVGSIHVQAPTKTLFWILK----------------------SI 316
           +CYFACE L+EK+YAIGG+ S        T   + K                       I
Sbjct: 164 RCYFACEVLDEKLYAIGGLVSNSSDNSWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKI 223

Query: 317 YIRCGAPSTIPTR---VVY*PSNGTWQHADEDMMSGWT 421
           Y RC   + +      VVY PS+GTWQ+AD DM+SGWT
Sbjct: 224 YTRCARHTDVAPHAFAVVYEPSSGTWQYADADMVSGWT 261



 Score = 42.4 bits (98), Expect(2) = 5e-15
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = +1

Query: 415 LDET*GTRVMMWWKESREWVALGRLSRLPT 504
           LD++ GTR+MMW KE REW+ +G+LS L T
Sbjct: 274 LDQSLGTRLMMWHKERREWIPVGKLSPLLT 303


>ref|XP_003529944.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 361

 Score = 57.4 bits (137), Expect(2) = 3e-13
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 24/94 (25%)
 Frame = +2

Query: 212 FACEALNEKIYAIGGVGSIHVQAPTKTL-----FWILKS-----------------IYIR 325
           F CE L++K+YAIGG GS       +T       W  ++                 IY+R
Sbjct: 167 FGCEVLDKKLYAIGGGGSKSSYHSWETFDPLTNCWTSQTDPKIVNEIKDSVVLDGKIYVR 226

Query: 326 CGAPSTIPT--RVVY*PSNGTWQHADEDMMSGWT 421
           C      P    VVY PS+GTW++AD+DM+SGWT
Sbjct: 227 CSRYPVTPHVFAVVYEPSSGTWEYADDDMVSGWT 260



 Score = 43.1 bits (100), Expect(2) = 3e-13
 Identities = 17/29 (58%), Positives = 24/29 (82%)
 Frame = +1

Query: 415 LDET*GTRVMMWWKESREWVALGRLSRLP 501
           LD++ GT++MMW KE REW+ +G+LS LP
Sbjct: 273 LDQSAGTKLMMWHKERREWILVGKLSPLP 301