BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020091
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   105   5e-37
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              105   5e-37
ref|XP_002307793.1| cholesterol transport protein [Populus trich...   104   5e-36
ref|XP_003581529.1| PREDICTED: niemann-Pick C1 protein [Brachypo...   105   8e-36
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...   105   1e-35

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  105 bits (261), Expect(2) = 5e-37
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +3

Query: 3    CVHITHAFSVSNGNREQRAREALSTMGASVLSGITLTKLVGVIVLRFARSEVFVIYYFQM 182
            CVHITHAFSVS+G+R QR +EAL TMGASV SGITLTKLVGVIVL F+R+EVFV+YYFQM
Sbjct: 1205 CVHITHAFSVSSGDRNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQM 1264

Query: 183  YL 188
            YL
Sbjct: 1265 YL 1266



 Score = 74.3 bits (181), Expect(2) = 5e-37
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +2

Query: 263  YYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRRILV---EDQIPASS 397
            YYFQMYLALVL+GFLHGLVFLPVVLS+CGPPSR +L+   EDQ   SS
Sbjct: 1260 YYFQMYLALVLLGFLHGLVFLPVVLSMCGPPSRCVLIDKREDQPSPSS 1307


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  105 bits (261), Expect(2) = 5e-37
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +3

Query: 3    CVHITHAFSVSNGNREQRAREALSTMGASVLSGITLTKLVGVIVLRFARSEVFVIYYFQM 182
            CVHITHAFSVS+G+R QR +EAL TMGASV SGITLTKLVGVIVL F+R+EVFV+YYFQM
Sbjct: 1138 CVHITHAFSVSSGDRNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQM 1197

Query: 183  YL 188
            YL
Sbjct: 1198 YL 1199



 Score = 74.3 bits (181), Expect(2) = 5e-37
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +2

Query: 263  YYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRRILV---EDQIPASS 397
            YYFQMYLALVL+GFLHGLVFLPVVLS+CGPPSR +L+   EDQ   SS
Sbjct: 1193 YYFQMYLALVLLGFLHGLVFLPVVLSMCGPPSRCVLIDKREDQPSPSS 1240


>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
            gi|222857242|gb|EEE94789.1| cholesterol transport protein
            [Populus trichocarpa]
          Length = 1274

 Score =  104 bits (260), Expect(2) = 5e-36
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +3

Query: 3    CVHITHAFSVSNGNREQRAREALSTMGASVLSGITLTKLVGVIVLRFARSEVFVIYYFQM 182
            CVHITHAFSVS G+R+QR R+AL TMGASV SGITLTKLVGVIVL F+R+EVFV+YYFQM
Sbjct: 1170 CVHITHAFSVSCGDRDQRVRDALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQM 1229

Query: 183  YL 188
            YL
Sbjct: 1230 YL 1231



 Score = 71.6 bits (174), Expect(2) = 5e-36
 Identities = 37/48 (77%), Positives = 39/48 (81%)
 Frame = +2

Query: 263  YYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRRILVEDQIPASSVQL 406
            YYFQMYLALVL+GFLHGLVFLPVVLS+ GPPSR  LVE Q    SV L
Sbjct: 1225 YYFQMYLALVLLGFLHGLVFLPVVLSMFGPPSRCKLVEKQEDRLSVSL 1272


>ref|XP_003581529.1| PREDICTED: niemann-Pick C1 protein [Brachypodium distachyon]
          Length = 1237

 Score =  105 bits (262), Expect(2) = 8e-36
 Identities = 52/62 (83%), Positives = 56/62 (90%)
 Frame = +3

Query: 3    CVHITHAFSVSNGNREQRAREALSTMGASVLSGITLTKLVGVIVLRFARSEVFVIYYFQM 182
            CVHITHAF V  G+RE RAR ALST+GASV SGITLTKLVGVIVLRFA+SEVFV+YYFQM
Sbjct: 1133 CVHITHAFMVGIGDRENRARHALSTIGASVFSGITLTKLVGVIVLRFAKSEVFVVYYFQM 1192

Query: 183  YL 188
            YL
Sbjct: 1193 YL 1194



 Score = 70.1 bits (170), Expect(2) = 8e-36
 Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
 Frame = +2

Query: 263  YYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRRI--LVEDQIPASSVQ 403
            YYFQMYLALVLIGFLHGL+FLPVVLS+CGPP + +  + + Q P S+ Q
Sbjct: 1188 YYFQMYLALVLIGFLHGLIFLPVVLSLCGPPQKTMKPIEQSQTPPSNGQ 1236


>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
            gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
            [Ricinus communis]
          Length = 1235

 Score =  105 bits (262), Expect(2) = 1e-35
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = +3

Query: 3    CVHITHAFSVSNGNREQRAREALSTMGASVLSGITLTKLVGVIVLRFARSEVFVIYYFQM 182
            CVHITHAFSVS+G+R+QR +EAL TMGASV SGITLTKLVGV+VL F+R+EVFV+YYFQM
Sbjct: 1131 CVHITHAFSVSSGDRDQRVKEALGTMGASVFSGITLTKLVGVLVLCFSRTEVFVVYYFQM 1190

Query: 183  YL 188
            YL
Sbjct: 1191 YL 1192



 Score = 69.7 bits (169), Expect(2) = 1e-35
 Identities = 36/48 (75%), Positives = 38/48 (79%)
 Frame = +2

Query: 263  YYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRRILVEDQIPASSVQL 406
            YYFQMYLALVL+GFLHGLVFLPVVLS+ GPPSR  LVE      SV L
Sbjct: 1186 YYFQMYLALVLLGFLHGLVFLPVVLSMFGPPSRCKLVEKPEDRPSVSL 1233