BLASTX nr result

ID: Cimicifuga21_contig00020082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020082
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW75914.1| photosystemI1 [Zea mays]                                92   3e-17
ref|NP_001150793.1| NFU3 [Zea mays] gi|195641898|gb|ACG40417.1| ...    92   3e-17
ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...    92   6e-17
ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplasti...    91   1e-16
ref|XP_002869644.1| hypothetical protein ARALYDRAFT_492226 [Arab...    90   2e-16

>gb|AFW75914.1| photosystemI1 [Zea mays]
          Length = 266

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   GTGGGVLELVQIDGYVAKVRLGGPAAGVMTVRVAITQKLREKIPSIAAVQLIE 160
           GTGGG LEL+QIDGYV K+R+GGPAAGVMTVRVA+TQKLREKIPSI AVQL E
Sbjct: 214 GTGGGSLELLQIDGYVVKIRIGGPAAGVMTVRVAVTQKLREKIPSILAVQLTE 266


>ref|NP_001150793.1| NFU3 [Zea mays] gi|195641898|gb|ACG40417.1| NFU3 [Zea mays]
          Length = 213

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   GTGGGVLELVQIDGYVAKVRLGGPAAGVMTVRVAITQKLREKIPSIAAVQLIE 160
           GTGGG LEL+QIDGYV K+R+GGPAAGVMTVRVA+TQKLREKIPSI AVQL E
Sbjct: 161 GTGGGSLELLQIDGYVVKIRIGGPAAGVMTVRVAVTQKLREKIPSILAVQLTE 213


>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +2

Query: 2   GTGGGVLELVQIDGYVAKVRLGGPAAGVMTVRVAITQKLREKIPSIAAVQLIE 160
           GTGGGVLELVQID Y+ KVRL GPAAGVMTVRVA+TQKLR+KIP+IAAVQLI+
Sbjct: 168 GTGGGVLELVQIDDYIVKVRLSGPAAGVMTVRVALTQKLRDKIPAIAAVQLID 220


>ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
           gi|297735420|emb|CBI17860.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = +2

Query: 2   GTGGGVLELVQIDGYVAKVRLGGPAAGVMTVRVAITQKLREKIPSIAAVQLIE 160
           GTGGGVLELVQI+ YV KVRL GPAAGVMTVRVA+TQKLREKIP+IAAVQLI+
Sbjct: 184 GTGGGVLELVQINDYVIKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLID 236


>ref|XP_002869644.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
           lyrata] gi|297315480|gb|EFH45903.1| hypothetical protein
           ARALYDRAFT_492226 [Arabidopsis lyrata subsp. lyrata]
          Length = 238

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/53 (83%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   GTGGGVLELVQIDGYVAKVRLGGPAAGVMTVRVAITQKLREKIPSIAAVQLIE 160
           GTGGG LELV+IDGY+ KVRL GPAAGVMTVRVA+TQKLRE IPSI AVQL+E
Sbjct: 186 GTGGGGLELVEIDGYIVKVRLSGPAAGVMTVRVALTQKLRENIPSIGAVQLLE 238


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