BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020080
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39565.3| unnamed protein product [Vitis vinifera]              172   5e-41
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   172   5e-41
emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]   169   3e-40
ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like...   159   3e-37
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc...   157   1e-36

>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  172 bits (435), Expect = 5e-41
 Identities = 87/141 (61%), Positives = 109/141 (77%)
 Frame = +3

Query: 3   RFKDLIPILKQYVQSRHIPNTPKVFVSHNARCFDVPFLKNEFSRCSEEIPLDWLFLDTLP 182
           R+KDLIPIL QYV+SR  P    ++V+HN R FDVPFL NEFSRC+ E+P +W FLDTLP
Sbjct: 191 RWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLP 250

Query: 183 LARELAKLEGTKNLAGKSVQALREYYGIPLVGKAHRAMSDVHSLASILRELTIDLKLPVS 362
           LAREL K  G+    G S+QALREYY IPLVG AHR +SDV++L+ +L+ LT +LK+ V+
Sbjct: 251 LARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVA 310

Query: 363 GLLERTFRASDIINGKKKKKT 425
            LL+R+F ASDIIN KKKK +
Sbjct: 311 NLLDRSFTASDIINPKKKKNS 331


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           DNA polymerase III polC-type-like isoform 1 [Vitis
           vinifera]
          Length = 337

 Score =  172 bits (435), Expect = 5e-41
 Identities = 87/141 (61%), Positives = 109/141 (77%)
 Frame = +3

Query: 3   RFKDLIPILKQYVQSRHIPNTPKVFVSHNARCFDVPFLKNEFSRCSEEIPLDWLFLDTLP 182
           R+KDLIPIL QYV+SR  P    ++V+HN R FDVPFL NEFSRC+ E+P +W FLDTLP
Sbjct: 196 RWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLP 255

Query: 183 LARELAKLEGTKNLAGKSVQALREYYGIPLVGKAHRAMSDVHSLASILRELTIDLKLPVS 362
           LAREL K  G+    G S+QALREYY IPLVG AHR +SDV++L+ +L+ LT +LK+ V+
Sbjct: 256 LARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVA 315

Query: 363 GLLERTFRASDIINGKKKKKT 425
            LL+R+F ASDIIN KKKK +
Sbjct: 316 NLLDRSFTASDIINPKKKKNS 336


>emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]
          Length = 340

 Score =  169 bits (428), Expect = 3e-40
 Identities = 85/141 (60%), Positives = 109/141 (77%)
 Frame = +3

Query: 3   RFKDLIPILKQYVQSRHIPNTPKVFVSHNARCFDVPFLKNEFSRCSEEIPLDWLFLDTLP 182
           R+KDLIPIL QYV+SR  P    ++V+HN R FDVPFL NEFSRC+ E+P +W F+DTLP
Sbjct: 199 RWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFMDTLP 258

Query: 183 LARELAKLEGTKNLAGKSVQALREYYGIPLVGKAHRAMSDVHSLASILRELTIDLKLPVS 362
           LARE  K  G+   +G S+QALREY+ IPLVG AHR +SDV++L+ IL+ LT +LK+ V+
Sbjct: 259 LAREFIKSAGSDLPSGASLQALREYFRIPLVGPAHRVLSDVYTLSQILQMLTFNLKVSVA 318

Query: 363 GLLERTFRASDIINGKKKKKT 425
            LL+R+F ASDIIN KKKK +
Sbjct: 319 NLLDRSFTASDIINPKKKKNS 339


>ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  159 bits (403), Expect = 3e-37
 Identities = 85/140 (60%), Positives = 103/140 (73%)
 Frame = +3

Query: 3   RFKDLIPILKQYVQSRHIPNTPKVFVSHNARCFDVPFLKNEFSRCSEEIPLDWLFLDTLP 182
           R +DLIPIL QYV+SR  P    +FV+HNARCFDVPF+ NE  R S EIP +WLFLDTLP
Sbjct: 190 RMEDLIPILLQYVRSREKPGGDVIFVAHNARCFDVPFIINELRRYSVEIPPNWLFLDTLP 249

Query: 183 LARELAKLEGTKNLAGKSVQALREYYGIPLVGKAHRAMSDVHSLASILRELTIDLKLPVS 362
           LAREL K  GT  L+  S+ ALR+ YGI + G AHRAM DV++L+ IL  LT DLKL +S
Sbjct: 250 LARELIKSGGT-TLSSTSLAALRDLYGIKVDGSAHRAMVDVNALSLILSRLTSDLKLTLS 308

Query: 363 GLLERTFRASDIINGKKKKK 422
            L++++F  SDIIN K KKK
Sbjct: 309 DLVKKSFTESDIINSKNKKK 328


>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 332

 Score =  157 bits (398), Expect = 1e-36
 Identities = 81/141 (57%), Positives = 106/141 (75%)
 Frame = +3

Query: 3   RFKDLIPILKQYVQSRHIPNTPKVFVSHNARCFDVPFLKNEFSRCSEEIPLDWLFLDTLP 182
           R +DL+PIL  YV+SR  P    ++V HNAR FDVPF+ NEF RCS +IP +WLF+DTLP
Sbjct: 192 RMEDLVPILFHYVKSREKPRGYVLWVGHNARVFDVPFIINEFRRCSTQIPPNWLFVDTLP 251

Query: 183 LARELAKLEGTKNLAGKSVQALREYYGIPLVGKAHRAMSDVHSLASILRELTIDLKLPVS 362
           LAR+L K EGTK L   S+ +LR++Y I + G AHRAM DV++L+ IL +LT DLKL +S
Sbjct: 252 LARQLMKSEGTK-LPSVSLDSLRKFYEIKVDGPAHRAMEDVNTLSLILPKLTCDLKLTLS 310

Query: 363 GLLERTFRASDIINGKKKKKT 425
           GL+E++F  +DIIN KKKK +
Sbjct: 311 GLVEKSFTEADIINSKKKKNS 331