BLASTX nr result

ID: Cimicifuga21_contig00020075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020075
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39829.1| unknown [Medicago truncatula]                           60   2e-07
ref|XP_003625224.1| TBCC domain-containing protein [Medicago tru...    57   2e-06
ref|XP_004156008.1| PREDICTED: LOW QUALITY PROTEIN: TBCC domain-...    56   3e-06
ref|XP_004146385.1| PREDICTED: TBCC domain-containing protein 1-...    56   3e-06
ref|XP_003554199.1| PREDICTED: TBCC domain-containing protein 1-...    56   3e-06

>gb|AFK39829.1| unknown [Medicago truncatula]
          Length = 58

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 4   EIKQALRDLLLDENRKQEL-FALLVYFKDWLYAFKNIIHLYYTQGD 138
           EI+Q LR+  L+E+RK+EL FAL VYFKDWLYA  NI  LYY QGD
Sbjct: 13  EIRQLLREAPLEESRKRELSFALHVYFKDWLYASGNIRQLYYLQGD 58


>ref|XP_003625224.1| TBCC domain-containing protein [Medicago truncatula]
           gi|124360656|gb|ABN08645.1| Tubulin binding cofactor C
           [Medicago truncatula] gi|355500239|gb|AES81442.1| TBCC
           domain-containing protein [Medicago truncatula]
          Length = 558

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = +1

Query: 4   EIKQALRDLLLDENRKQELF-ALLVYFKDWLYAFKNIIHLYYTQGD 138
           EI+Q LR+  L+E+RK+EL  AL VYFKDWLYA  NI  LYY QGD
Sbjct: 513 EIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYYLQGD 558


>ref|XP_004156008.1| PREDICTED: LOW QUALITY PROTEIN: TBCC domain-containing protein
           1-like [Cucumis sativus]
          Length = 570

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +1

Query: 4   EIKQALRDLLLDENRKQELF-ALLVYFKDWLYAFKNIIHLYYTQGD 138
           E+KQ LR+  L+ENRK+EL  AL VYFKDWLYA  NI  LY  QGD
Sbjct: 525 EVKQILRETPLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 570


>ref|XP_004146385.1| PREDICTED: TBCC domain-containing protein 1-like [Cucumis sativus]
          Length = 570

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +1

Query: 4   EIKQALRDLLLDENRKQELF-ALLVYFKDWLYAFKNIIHLYYTQGD 138
           E+KQ LR+  L+ENRK+EL  AL VYFKDWLYA  NI  LY  QGD
Sbjct: 525 EVKQILRETPLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 570


>ref|XP_003554199.1| PREDICTED: TBCC domain-containing protein 1-like [Glycine max]
          Length = 565

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   EEIKQALRDLLLDENRKQELF-ALLVYFKDWLYAFKNIIHLYYTQGD 138
           EEI+Q LR+  L+E+RK+EL  AL VYFKDWLYA  NI  LY  QGD
Sbjct: 519 EEIRQLLREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 565


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