BLASTX nr result

ID: Cimicifuga21_contig00020073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020073
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vit...    86   4e-15
ref|XP_002510190.1| conserved hypothetical protein [Ricinus comm...    66   4e-09
emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]    65   7e-09
emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]       65   1e-08
ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like...    64   2e-08

>ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
           gi|302142294|emb|CBI19497.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 60/124 (48%), Positives = 70/124 (56%), Gaps = 16/124 (12%)
 Frame = +1

Query: 265 KSLLLEDHN-RVASG-STDESSVALDSS--------GFVIPAELKE------SGIGSGDC 396
           +S +L D + RV SG ST  SS  ++SS        G   PA +KE      S I + D 
Sbjct: 79  RSAILSDSDCRVRSGLSTAGSSAVVESSTGINFSDHGAYCPAGMKETAGNTFSSIAAVDS 138

Query: 397 EAVGGSVKRRKLPMENDFDDFDCXXXXXXXXXXXPTKSAPSRNSSKRSRAAEVHNLSEKR 576
           EA+  S KRR   MEN  DDF C           P+  APSR+SSKRSRAAEVHNLSEKR
Sbjct: 139 EAITVSRKRRMFSMENSVDDFGCDSEKGPEASDVPSNPAPSRSSSKRSRAAEVHNLSEKR 198

Query: 577 RRSR 588
           RRSR
Sbjct: 199 RRSR 202


>ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
           gi|223550891|gb|EEF52377.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 312

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/85 (49%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
 Frame = +1

Query: 355 PAELKESGIGSGDCEAV--GG-----SVKRRKLPMENDFDDFDCXXXXXXXXXXXPTKSA 513
           PAEL   G GS        GG     S +RR + MEND  D  C           P+++ 
Sbjct: 56  PAELFFGGGGSSSLNYSDQGGYFAKESAERRGVSMENDLGDLSCDSEKGAEVAEVPSETV 115

Query: 514 PSRNSSKRSRAAEVHNLSEKRRRSR 588
             RNSSKRSRAAEVHNLSEKRRRSR
Sbjct: 116 RPRNSSKRSRAAEVHNLSEKRRRSR 140


>emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
          Length = 489

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 53/124 (42%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
 Frame = +1

Query: 265 KSLLLEDHN-RVASG-STDESSVALDSS--------GFVIPAELKE------SGIGSGDC 396
           +S +L D + RV SG ST  SS  ++SS        G   PA +KE      S I + D 
Sbjct: 79  RSAILSDSDCRVRSGLSTAGSSAVVESSTGINFSDHGAYCPAGMKEXAGNTFSSIAAVDS 138

Query: 397 EAVGGSVKRRKLPMENDFDDFDCXXXXXXXXXXXPTKSAPSRNSSKRSRAAEVHNLSEKR 576
           EA+  S KRR   MEN  DDF C           P+  APSR+SSKRSRAAE       R
Sbjct: 139 EAITVSRKRRMFSMENSVDDFGCDSEKGPEASDVPSNPAPSRSSSKRSRAAE-------R 191

Query: 577 RRSR 588
           RRSR
Sbjct: 192 RRSR 195


>emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
          Length = 445

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
 Frame = +1

Query: 295 VASGSTDESSVALDSSGFVIPAELKESGIGSGDCEAVGGS---------VKRRKLPMEND 447
           V+S   DE++   +  G    + L E+G+ SG   ++G            K++K   + D
Sbjct: 95  VSSSVGDETAEGTER-GVCGTSGLSEAGV-SGRQSSIGDQSSPRRDSEPCKKKKAHNDTD 152

Query: 448 FDDFDCXXXXXXXXXXXPTKSAPSRNSSKRSRAAEVHNLSEKRRRSR 588
            DD DC            +K APSR+S+KRSRAAEVHNLSEKRRRSR
Sbjct: 153 LDDLDCESEEGQEPSEEMSKPAPSRSSTKRSRAAEVHNLSEKRRRSR 199


>ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
          Length = 375

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/104 (43%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = +1

Query: 298 ASGSTDESSVALDS-----SGFVIPAELKESGIGSGDCEAVGGSVKRRKLPMENDFDDFD 462
           AS   D   +ALDS     SG    +  K  G  + +  +    V       EN+ DD+D
Sbjct: 62  ASQLQDGKILALDSTASFASGSAACSPFKGQGASAANVSSSSAGVS------ENENDDYD 115

Query: 463 CXXXXXXXXXXX--PTKSAPSRNSSKRSRAAEVHNLSEKRRRSR 588
           C             PTK+A SR+SSKRSRAAEVHNLSEKRRRSR
Sbjct: 116 CESEEGVEALAEEVPTKAASSRSSSKRSRAAEVHNLSEKRRRSR 159


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