BLASTX nr result

ID: Cimicifuga21_contig00020056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020056
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...   123   2e-26
ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002865789.1| hypothetical protein ARALYDRAFT_918053 [Arab...   100   9e-20
ref|XP_002511226.1| conserved hypothetical protein [Ricinus comm...   100   2e-19

>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/114 (57%), Positives = 79/114 (69%), Gaps = 13/114 (11%)
 Frame = +3

Query: 45  PIWLN-----------ANRRIQT--TVLMPQPVRPVGSCVMVECVTDTCTDGEVLLGSTD 185
           PIWL+           ++R + T  TV+MPQPVR VGSCV VECVTDT  DG+  LGSTD
Sbjct: 126 PIWLSFANGSTEGHCGSDRAVITDRTVVMPQPVRLVGSCVTVECVTDTWVDGD-WLGSTD 184

Query: 186 EEKKTSLEKDTCPGFISDGMNRVWWTNEAYRKMVNQEGEARPEIVWLVMKERLP 347
           EEK  +L++DTCPGF+SDG+NRV WTN AYR+MV         +VWLVMK R+P
Sbjct: 185 EEKINNLDRDTCPGFVSDGLNRVTWTNAAYRRMVGHVTPGPEMMVWLVMKARVP 238


>ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|222859378|gb|EEE96925.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = +3

Query: 81  TVLMPQPVRPVGSCVMVECVTDTCTDGEVLLGSTDEEKKTSLEKDTCPGFISDGMNRVWW 260
           TV+MP+ V  VGSCV VECVTDT  D + L G TD+EKK ++EKDTCPGFISDG  RV W
Sbjct: 168 TVVMPRVVNIVGSCVTVECVTDTWVDLDGL-GRTDDEKKINMEKDTCPGFISDGYGRVTW 226

Query: 261 TNEAYRKMVNQ-EGEARPEIVWLVMKERLP 347
            NEAYRKMV Q EG      VWL MKE++P
Sbjct: 227 ENEAYRKMVGQGEGGDHQVFVWLAMKEKVP 256


>ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|222869226|gb|EEF06357.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  108 bits (270), Expect = 5e-22
 Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = +3

Query: 81  TVLMPQPVRPVGSCVMVECVTDTCTDGEVLLGSTDEEKKTSLEKDTCPGFISDGMNRVWW 260
           TV+MP  +  VGSCV +ECVTDT  D + L G TD+EK+ +LEKDTCPGFISDG  RV W
Sbjct: 174 TVVMPGVMNIVGSCVTLECVTDTWVDVDGL-GRTDKEKRVNLEKDTCPGFISDGYGRVTW 232

Query: 261 TNEAYRKMVNQ-EGEARPEIVWLVMKERLP 347
           TNEAYRKMV Q EG      VWL +KE+ P
Sbjct: 233 TNEAYRKMVGQGEGGDHQVFVWLAIKEKAP 262


>ref|XP_002865789.1| hypothetical protein ARALYDRAFT_918053 [Arabidopsis lyrata subsp.
           lyrata] gi|297311624|gb|EFH42048.1| hypothetical protein
           ARALYDRAFT_918053 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = +3

Query: 48  IWLNANRRIQTTVLMPQPVRPVGSCVMVECVTDTCTDGEVLLGSTDEEKKTSLEKDTCPG 227
           +WLN+NRR QT  LM + V  V S + VECVT+   +GE  LG TD+E K +LE+DTCPG
Sbjct: 139 LWLNSNRRYQTE-LMTETV--VSSVLTVECVTERLMEGEYELGCTDDEIKMNLERDTCPG 195

Query: 228 FISDGMNRVWWTNEAYRKMV--NQEGEARPEIVWLVMKER 341
           FISDG+ RV WTN +YR++V      +     VWLVMKER
Sbjct: 196 FISDGLGRVIWTNRSYRELVVGKDHEQCGKMSVWLVMKER 235


>ref|XP_002511226.1| conserved hypothetical protein [Ricinus communis]
           gi|223550341|gb|EEF51828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 5/95 (5%)
 Frame = +3

Query: 75  QTTVLMPQPVRPV-GSCVMVECVTDTCT--DGEVLLGSTDEEKKTSLEKDTCPGFISDGM 245
           Q  V  PQ +R V GSCV VEC+TDT    DG   LG TDEEK+ +LE+DTCPGFISDG 
Sbjct: 149 QNVVTHPQIMRVVMGSCVTVECITDTWVNLDG---LGGTDEEKRMNLERDTCPGFISDGF 205

Query: 246 NRVWWTNEAYRKMVNQEGEAR--PEIVWLVMKERL 344
            RV WTNEAY+KM  Q  + R    +VWLVMK+++
Sbjct: 206 GRVTWTNEAYKKMAGQGEDWRRGEVVVWLVMKDKV 240


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