BLASTX nr result

ID: Cimicifuga21_contig00020050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020050
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47610.1| unknown [Lotus japonicus]                               94   1e-17
gb|AFK46380.1| unknown [Lotus japonicus]                               94   1e-17
ref|XP_002532723.1| proteasome subunit alpha type, putative [Ric...    94   1e-17
ref|NP_001238251.1| proteasome subunit alpha type-6 [Glycine max...    93   3e-17
ref|XP_003541109.1| PREDICTED: proteasome subunit alpha type-6-l...    92   3e-17

>gb|AFK47610.1| unknown [Lotus japonicus]
          Length = 246

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = -3

Query: 303 VQTAISALQSVLQEDFKATEIEVGVVRKENPIFRVLSTDEIDEQLTAISERD 148
           VQTAISALQSVLQEDFKATEIEVGVVRK+NP FRVLSTDEIDE LTAISERD
Sbjct: 195 VQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLSTDEIDEHLTAISERD 246


>gb|AFK46380.1| unknown [Lotus japonicus]
          Length = 246

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = -3

Query: 303 VQTAISALQSVLQEDFKATEIEVGVVRKENPIFRVLSTDEIDEQLTAISERD 148
           VQTAISALQSVLQEDFKATEIEVGVVRK+NP FRVLSTDEIDE LTAISERD
Sbjct: 195 VQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLSTDEIDEHLTAISERD 246


>ref|XP_002532723.1| proteasome subunit alpha type, putative [Ricinus communis]
           gi|223527531|gb|EEF29654.1| proteasome subunit alpha
           type, putative [Ricinus communis]
          Length = 246

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 303 VQTAISALQSVLQEDFKATEIEVGVVRKENPIFRVLSTDEIDEQLTAISERD 148
           VQTAISALQSVLQEDFKATEIEVGVVR ENP+FRVLST+EIDE LTAISERD
Sbjct: 195 VQTAISALQSVLQEDFKATEIEVGVVRTENPVFRVLSTEEIDEHLTAISERD 246


>ref|NP_001238251.1| proteasome subunit alpha type-6 [Glycine max]
           gi|12229897|sp|O48551.2|PSA6_SOYBN RecName:
           Full=Proteasome subunit alpha type-6; AltName: Full=20S
           proteasome alpha subunit A; AltName: Full=20S proteasome
           subunit alpha-1; AltName: Full=Proteasome iota subunit
           gi|3377794|gb|AAC28135.1| proteasome IOTA subunit
           [Glycine max]
          Length = 246

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 303 VQTAISALQSVLQEDFKATEIEVGVVRKENPIFRVLSTDEIDEQLTAISERD 148
           VQTAISALQSVLQEDFKATEIEVGVVRK+NP FRVL+TDEIDE LTAISERD
Sbjct: 195 VQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISERD 246


>ref|XP_003541109.1| PREDICTED: proteasome subunit alpha type-6-like [Glycine max]
          Length = 368

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 303 VQTAISALQSVLQEDFKATEIEVGVVRKENPIFRVLSTDEIDEQLTAISERD 148
           VQTAISALQSVLQEDFKATEIEVGVVRKENP FRVL+T+EIDE LTAISERD
Sbjct: 317 VQTAISALQSVLQEDFKATEIEVGVVRKENPEFRVLTTEEIDEHLTAISERD 368


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