BLASTX nr result

ID: Cimicifuga21_contig00020047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020047
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327024.1| predicted protein [Populus trichocarpa] gi|2...    46   2e-07
ref|XP_002526477.1| transcription factor, putative [Ricinus comm...    41   1e-06
ref|XP_002301240.1| predicted protein [Populus trichocarpa] gi|2...    45   1e-06
ref|XP_002270272.1| PREDICTED: uncharacterized protein LOC100263...    39   2e-06

>ref|XP_002327024.1| predicted protein [Populus trichocarpa] gi|222835339|gb|EEE73774.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 25/32 (78%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -2

Query: 162 MILESQQRIAEAFANEISGKKK-TKRMPSPES 70
           MILESQQRI EAFA  +S KKK  KRMPSPES
Sbjct: 312 MILESQQRIVEAFAKALSEKKKRPKRMPSPES 343



 Score = 34.7 bits (78), Expect(2) = 2e-07
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = -3

Query: 323 GGGSGSKREMDPDVDMVASIRML*EGFVKMGQRKI 219
           G   G KRE +P  ++VA+I++L +GFV+M Q K+
Sbjct: 258 GEEMGKKREREPMEELVAAIKVLGDGFVRMEQMKM 292


>ref|XP_002526477.1| transcription factor, putative [Ricinus communis]
           gi|223534152|gb|EEF35868.1| transcription factor,
           putative [Ricinus communis]
          Length = 490

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
 Frame = -2

Query: 162 MILESQQRIAEAFANEIS--GKKKTKRMPSPES 70
           MIL SQQRI EAFA   S   KKK KR+PSPES
Sbjct: 458 MILHSQQRIVEAFAKAFSEKKKKKPKRIPSPES 490



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -3

Query: 311 GSKREMDPDVDMVASIRML*EGFVKMGQRKI 219
           G KRE DP  +MVA+I++L +GFV+M Q K+
Sbjct: 408 GKKRERDPMEEMVAAIKVLGDGFVRMEQMKM 438


>ref|XP_002301240.1| predicted protein [Populus trichocarpa] gi|222842966|gb|EEE80513.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 24/32 (75%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -2

Query: 162 MILESQQRIAEAFANEISGKKK-TKRMPSPES 70
           MIL+SQQRI EAFA  +S KKK  KRMPSPES
Sbjct: 334 MILDSQQRIVEAFAKALSEKKKRPKRMPSPES 365



 Score = 33.5 bits (75), Expect(2) = 1e-06
 Identities = 14/31 (45%), Positives = 24/31 (77%)
 Frame = -3

Query: 311 GSKREMDPDVDMVASIRML*EGFVKMGQRKI 219
           G KRE +P  ++VA++++L +GFV+M Q K+
Sbjct: 284 GRKREREPMEELVAAVKVLGDGFVRMEQMKM 314


>ref|XP_002270272.1| PREDICTED: uncharacterized protein LOC100263384 [Vitis vinifera]
          Length = 320

 Score = 38.5 bits (88), Expect(3) = 2e-06
 Identities = 22/32 (68%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
 Frame = -2

Query: 162 MILESQQRIAEAFANEISGKKK--TKRMPSPE 73
           MILESQQRI EAFAN +S KKK   K   SPE
Sbjct: 288 MILESQQRIVEAFANALSEKKKKPKKMTSSPE 319



 Score = 35.4 bits (80), Expect(3) = 2e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = -3

Query: 323 GGGSGSKREMDPDVDMVASIRML*EGFVKMGQRKI 219
           GGG G     DP  +MVA+I+ML +GF KM Q+K+
Sbjct: 239 GGGGG-----DPVAEMVAAIKMLGDGFAKMEQKKM 268



 Score = 22.3 bits (46), Expect(3) = 2e-06
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -1

Query: 454 KSYRRFDQTPDFQPNYNPN-LSSNPR 380
           K Y  FDQ P+  PN+    L  N R
Sbjct: 204 KIYGNFDQNPNPSPNFGSRVLGDNDR 229


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