BLASTX nr result

ID: Cimicifuga21_contig00020044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020044
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853...   164   7e-39
ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group] g...   148   4e-34
ref|XP_002525915.1| conserved hypothetical protein [Ricinus comm...   145   3e-33
gb|AFK48336.1| unknown [Lotus japonicus]                              144   6e-33

>ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853072 [Vitis vinifera]
           gi|297737443|emb|CBI26644.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/109 (69%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
 Frame = +3

Query: 48  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDMRVIACSRCKGA 227
           MENITASELAG GVGTLL CATIAAP+VD+FISASQR SLGMCKKCGD+++IACS+CKG 
Sbjct: 1   MENITASELAGFGVGTLLLCATIAAPRVDSFISASQRRSLGMCKKCGDLKMIACSKCKGV 60

Query: 228 GLVKSGA-LNFSLVDDIFQSLGGEKTNAGSISCSNCQGRGHMYCPECSK 371
           G VK+GA  +F+LVDD++QS  G+++   S +C +CQGRGH  CP+CSK
Sbjct: 61  GSVKAGAPFSFNLVDDLYQSFWGDESKVRSTACPSCQGRGHFSCPDCSK 109


>ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|222873115|gb|EEF10246.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/109 (65%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = +3

Query: 48  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDMRVIACSRCKGA 227
           M N+T+SE+AG GVG LL CATI+APK+D+FISASQR+SLGMCK+CGD+R+IACS CKG 
Sbjct: 1   MNNLTSSEVAGFGVGALLLCATISAPKIDSFISASQRSSLGMCKRCGDLRMIACSGCKGT 60

Query: 228 GLVK-SGALNFSLVDDIFQSLGGEKTNAGSISCSNCQGRGHMYCPECSK 371
           GLVK  GAL+F+ +DD+++SLGG+ +   +I CS CQ RG   CPECSK
Sbjct: 61  GLVKEGGALSFTFIDDMYESLGGD-SKVKTIRCSKCQARGRFCCPECSK 108


>ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group]
           gi|41469078|gb|AAS07052.1| expressed protein [Oryza
           sativa Japonica Group] gi|108708805|gb|ABF96600.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113548833|dbj|BAF12276.1| Os03g0414400 [Oryza sativa
           Japonica Group] gi|125544312|gb|EAY90451.1| hypothetical
           protein OsI_12037 [Oryza sativa Indica Group]
           gi|125586657|gb|EAZ27321.1| hypothetical protein
           OsJ_11261 [Oryza sativa Japonica Group]
           gi|215704738|dbj|BAG94766.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765188|dbj|BAG86885.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 111

 Score =  148 bits (374), Expect = 4e-34
 Identities = 65/109 (59%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +3

Query: 48  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDMRVIACSRCKGA 227
           ME +T+SE+AG GVG LL CATIAA +VD FI++SQRTSLGMCKKCGD+R++ACS+CKG 
Sbjct: 1   MEGLTSSEIAGFGVGALLVCATIAAQRVDGFIASSQRTSLGMCKKCGDLRIVACSQCKGV 60

Query: 228 GLVKSGAL-NFSLVDDIFQSLGGEKTNAGSISCSNCQGRGHMYCPECSK 371
           G V+ G L  F ++DDI++SLG E   +  + C+NC+ +G + CPECSK
Sbjct: 61  GSVRKGGLFTFGMLDDIYESLGAETKTSNLVPCTNCRSKGRLLCPECSK 109


>ref|XP_002525915.1| conserved hypothetical protein [Ricinus communis]
           gi|223534744|gb|EEF36435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/108 (61%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
 Frame = +3

Query: 48  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDMRVIACSRCKGA 227
           M NITASE+AGLGVG+LL C  IAAPK+D+FIS+SQR+SLGMCK CGD+R++ACS+C+G 
Sbjct: 1   MNNITASEIAGLGVGSLLLCCAIAAPKIDSFISSSQRSSLGMCKTCGDLRMVACSKCRGI 60

Query: 228 GLVKS-GALNFSLVDDIFQSLGGEKTNAGSISCSNCQGRGHMYCPECS 368
           G+VK+ G  +F+++DD++QSLGGE     +  CS CQ RG   CP+CS
Sbjct: 61  GVVKADGPFSFNMMDDLYQSLGGE-PKVKTFKCSKCQARGRFSCPDCS 107


>gb|AFK48336.1| unknown [Lotus japonicus]
          Length = 110

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/109 (59%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +3

Query: 48  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDMRVIACSRCKGA 227
           M+NITASE+AGLGVG LL  ATIAAPK+DAF S+SQR+SLGMCK+CG++R +ACSRCKG 
Sbjct: 1   MDNITASEIAGLGVGVLLLSATIAAPKIDAFFSSSQRSSLGMCKRCGNIRRLACSRCKGT 60

Query: 228 GLVKSGAL-NFSLVDDIFQSLGGEKTNAGSISCSNCQGRGHMYCPECSK 371
           G VK G L   +LVDD+++++G  ++    I+C  CQ +G+  CP+CSK
Sbjct: 61  GFVKEGGLFGINLVDDLYETIGNRESTVKQIACVKCQAKGYFSCPDCSK 109


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