BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020042
         (2803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...  1070   0.0  
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...  1009   0.0  
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   998   0.0  
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   989   0.0  
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   989   0.0  

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 557/877 (63%), Positives = 664/877 (75%), Gaps = 11/877 (1%)
 Frame = -3

Query: 2777 MSMEDPVNLYLDLDQWRETGFRDELXXXXXXXXXXXXXXSEFFMVGFVIVNIVGLQHYSG 2598
            M  EDPV+L++ LD WRE  F  +               SE ++VGFVIVNIVG+Q+YSG
Sbjct: 1    MDEEDPVSLFMSLDHWRE--FPIDADDDEDSSQCPLSSPSETYLVGFVIVNIVGIQYYSG 58

Query: 2597 RISGREMVGLDREPLNPYDTNAMKVLNMRRVQVGYVERSAAAVLAPLIDAGAIIVEGIVP 2418
             ISGRE VGL REPLNPYD NA+KVLN   +QVG+++RSAAAVLAPL+DA  + VEGIVP
Sbjct: 59   TISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAAAVLAPLMDANLVTVEGIVP 118

Query: 2417 NTPFGKSRYKLPCQVHIFSKRDVFPIVQATISSSGLMLISTSDPLIELXXXXXXXXXXXX 2238
            NTP   +RY++PCQVHIF++ + FP V++ IS  GL LIS SDP   L            
Sbjct: 119  NTPGSGNRYRIPCQVHIFAQIEWFPRVRSAISRGGLQLISDSDPSFTLSEAVIVKEKKCD 178

Query: 2237 XXXXXIDEIFKLVGADEDKKGANNAMDPPKNFIKSDLFMHQKEGLGWLVHRETCQDLPPF 2058
                 +DEIFKL   + +K+GA  AM+PPK+ IKS+LF+HQKE LGWLVHRE   +LPPF
Sbjct: 179  KEFKSLDEIFKLAIENVNKQGALEAMEPPKDVIKSELFLHQKEALGWLVHRENSCELPPF 238

Query: 2057 WEEKDGVYTNVLTNYHSDERPEPLQGGILADDMGLGKTLTLLSLIATNRPGSPRSSSVRI 1878
            WE+++G Y NVLTNY +++RPEPL+GGI ADDMGLGKTLTLL LIA ++  S  S SV  
Sbjct: 239  WEKQNGSYVNVLTNYQTNKRPEPLRGGIFADDMGLGKTLTLLCLIAFDKCSSDLSYSVNR 298

Query: 1877 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXK--------TSNTYCDNSGE-MEFVSKATLV 1725
                                                  T +T  D+  +    VSK TL+
Sbjct: 299  DNIEKLGEEDEELIVSSGKKSRKGRVSRKASGLRKKRKTDDTPSDDMLKGNSVVSKTTLI 358

Query: 1724 VCPPVVFSTWISQLGEHTRPGSFKVYMYYKDRTKDAKELEKYDLVLTTYSTLAAEANWED 1545
            VCPP VFSTW++QL EHT P   KVYMYY +RT++A+EL+KYD+VLTTYSTLA E  W  
Sbjct: 359  VCPPSVFSTWVTQLLEHTTPKRLKVYMYYGNRTQEAEELQKYDIVLTTYSTLATEEAWSG 418

Query: 1544 SPMKKIEWFRIILDEAHLIKNAEAQQSKAVIALKAKRRWVVTGTPIQNGSLDLFSLMAFL 1365
            SP+KKIEW+R+ILDEAH+IKN  AQQS+AV  L+AKRRWVVTGTPIQNG+ DLFSLMAFL
Sbjct: 419  SPVKKIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFL 478

Query: 1364 KFEPFSTKTHWLSLVQRPLSQGNESGLSRLQILMATISLRRVKDSTLVGLPPKTIETCFV 1185
            +FEPFS K++W SLVQRPL QG E GLSRLQ+LMATISLRR KD  L+GLPPK++ETCFV
Sbjct: 479  RFEPFSIKSYWQSLVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIGLPPKSVETCFV 538

Query: 1184 ELSAQERELYDQMEIEARTLVQAYIRVDSVMRNYSTVLSIILRLRQICDDVALYP-DIKS 1008
            ELSA+ERELYDQME E + +++ YI   SVMRNYSTVL IILRLRQIC DVAL P D++S
Sbjct: 539  ELSAEERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLRQICTDVALCPSDLRS 598

Query: 1007 LLPSNNIEDVSNNPDLLKKLVAMLQDGDDFDCPICICPPTNTVITCCAHIFCRACILKAL 828
            LL SNNIEDVSNNP+LLKK+V +LQDG+DFDCPICI PPTN VITCCAHIFCR CILK L
Sbjct: 599  LLLSNNIEDVSNNPELLKKMVLVLQDGEDFDCPICISPPTNIVITCCAHIFCRVCILKTL 658

Query: 827  KRPNPSCPLCRQSLSESDLFSAPPPEPSESDGAILPSREI-SSKVSALLKLIVADREHDP 651
            KR  P CPLCR  LS+SDLFSAPP E +E+D + +PS E  SSKV  LLK + A R+ +P
Sbjct: 659  KRTKPCCPLCRHPLSQSDLFSAPP-ESTETDNSEIPSSECTSSKVLTLLKFLSASRDQNP 717

Query: 650  STKSVIFSQFRKMLILLEEPLKASGFMILKLDGSMSAKKRAEVIKEFSSQDSGTPTVLLA 471
            STKSV+FSQFRKML+LLE+PLKA+GF  L+LDGSM+AK+RA+VI+EF +     PTVLLA
Sbjct: 718  STKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLA 777

Query: 470  SLKASGAGINLTIASRVYLLEPWWNPAVEEQAMDRVHRIGQTKDVKIVRLITKNSIEERI 291
            SLKASGAGINLT ASRVYLLEPWWNPAVEEQAMDRVHRIGQ +DVKIVRLI +NSIEERI
Sbjct: 778  SLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERI 837

Query: 290  LELQNKKKELAQEAFKKRSSKDVRQIGVEDLRVLMAM 180
            LELQ +KK+LA+EAF +R  KD R++GVEDLR+LM++
Sbjct: 838  LELQERKKKLAKEAFGRRGLKDRREVGVEDLRMLMSL 874


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 521/828 (62%), Positives = 634/828 (76%), Gaps = 2/828 (0%)
 Frame = -3

Query: 2657 EFFMVGFVIVNIVGLQHYSGRISGREMVGLDREPLNPYDTNAMKVLNMRRVQVGYVERSA 2478
            E FMVGFVI NIVGLQ+YSG I+GRE+VGL REPLNP+D NA+KVLN R +QVG++ERS 
Sbjct: 6    ESFMVGFVIANIVGLQYYSGTITGRELVGLVREPLNPFDQNALKVLNTRCLQVGHIERSV 65

Query: 2477 AAVLAPLIDAGAIIVEGIVPNTPFGKSRYKLPCQVHIFSKRDVFPIVQATISSSGLMLIS 2298
            AAVL+PLID+  I VEGIVPN+  G ++YK+PCQVH+F++ + F  V+  IS  GL+L+S
Sbjct: 66   AAVLSPLIDSNMINVEGIVPNSRSGGNKYKIPCQVHVFARVEDFESVKTAISRGGLVLLS 125

Query: 2297 TSDPLIELXXXXXXXXXXXXXXXXXIDEIFKLVGADEDKKGANNAMDPPKNFIKSDLFMH 2118
              +    L                 +DEIFKLV  + +KKG   A++PPK  IKS LF H
Sbjct: 126  QMEVGFGLSEAMVVKEKNKKSGLKSLDEIFKLVDENVNKKGKLGALEPPKEVIKSQLFEH 185

Query: 2117 QKEGLGWLVHRETCQDLPPFWEEKDGVYTNVLTNYHSDERPEPLQGGILADDMGLGKTLT 1938
            QKEGL WLV+RE   +LPPFWEEKDG + NVLTNYH++ RPEPL+GGI ADDMGLGKTL 
Sbjct: 186  QKEGLWWLVNRENSGELPPFWEEKDGEFVNVLTNYHTNRRPEPLRGGIFADDMGLGKTLA 245

Query: 1937 LLSLIATNRPGSPRSSSVRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTYCDNSG 1758
            LLSLIA ++ G                                         N   +  G
Sbjct: 246  LLSLIAFDKCGGGTG------------------------------VVGGNKDNVAEEIGG 275

Query: 1757 EMEFVSKATLVVCPPVVFSTWISQLGEHTRPGSFKVYMYYKDRTKDAKELEKYDLVLTTY 1578
            + E     TL+VCPP VFSTWI+QL EHT+ GS  VYMYY +RT++ +EL+K+D+VLTTY
Sbjct: 276  DDE---DTTLIVCPPAVFSTWITQLEEHTQRGSLGVYMYYGERTREVEELKKHDIVLTTY 332

Query: 1577 STLAAEANWEDSPMKKIEWFRIILDEAHLIKNAEAQQSKAVIALKAKRRWVVTGTPIQNG 1398
            STLAAE  WEDSP+KKI+W R+ILDEAH+IKNA +QQS+AV  L AKRRWVVTGTPIQNG
Sbjct: 333  STLAAEDPWEDSPVKKIDWCRVILDEAHVIKNANSQQSRAVTKLNAKRRWVVTGTPIQNG 392

Query: 1397 SLDLFSLMAFLKFEPFSTKTHWLSLVQRPLSQGNESGLSRLQILMATISLRRVKDSTLVG 1218
            SLDLFSLMAFL+FEPFS K++W SL+QRPL+QGN+ GLSRLQ+LMATISLRR KD  +VG
Sbjct: 393  SLDLFSLMAFLRFEPFSIKSYWQSLLQRPLAQGNKKGLSRLQVLMATISLRRTKDKGVVG 452

Query: 1217 LPPKTIETCFVELSAQERELYDQMEIEARTLVQAYIRVDSVMRNYSTVLSIILRLRQICD 1038
            LP KT+ET ++ELS +ERELYDQME EA+ +VQ +I  +++MRN+STVL IILRLRQIC+
Sbjct: 453  LPSKTVETHYIELSGEERELYDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRLRQICN 512

Query: 1037 DVALYP-DIKSLLPSNNIEDVSNNPDLLKKLVAMLQDGDDFDCPICICPPTNTVITCCAH 861
            D+AL P D++SLLPSN+IEDVSNNP+LL K+V +LQDG+DFDCPICICPPT TVIT CAH
Sbjct: 513  DLALCPSDLRSLLPSNSIEDVSNNPELLMKMVTVLQDGEDFDCPICICPPTETVITRCAH 572

Query: 860  IFCRACILKALKRPNPSCPLCRQSLSESDLFSAPPPEPSESDGAILPSR-EISSKVSALL 684
            IFCR CILK L+R    CPLCR+ LS SDLFSA PPE S SD A   SR   SSKVSAL+
Sbjct: 573  IFCRPCILKTLQRAKQCCPLCRRPLSVSDLFSA-PPESSGSDNANTSSRTTTSSKVSALI 631

Query: 683  KLIVADREHDPSTKSVIFSQFRKMLILLEEPLKASGFMILKLDGSMSAKKRAEVIKEFSS 504
            KL++A R  +P+ KSV+FSQF+KML+LLEEPLK +GF IL+LDGSM+AKKRA+VIK+F  
Sbjct: 632  KLLIASRVENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGV 691

Query: 503  QDSGTPTVLLASLKASGAGINLTIASRVYLLEPWWNPAVEEQAMDRVHRIGQTKDVKIVR 324
                 PTVLLASLKASGAGINL +ASRVYLLEPWWNPAVEEQAMDRVHRIGQ +DV +VR
Sbjct: 692  PGPDGPTVLLASLKASGAGINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVR 751

Query: 323  LITKNSIEERILELQNKKKELAQEAFKKRSSKDVRQIGVEDLRVLMAM 180
            LI ++SIEERILE+Q +KK+LA+EAF +R +K  R++G++DLR LM++
Sbjct: 752  LIAQSSIEERILEMQERKKKLAKEAFGRRGTKTQREVGIDDLRALMSL 799


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316976|gb|EFH47398.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  998 bits (2579), Expect = 0.0
 Identities = 507/830 (61%), Positives = 624/830 (75%), Gaps = 4/830 (0%)
 Frame = -3

Query: 2657 EFFMVGFVIVNIVGLQHYSGRISGREMVGLDREPLNPYDTNAMKVLNMRRVQVGYVERSA 2478
            E +++GFVI NIVGL++YSGRI+GREMVGL REPLNPYD NA++VLN R  QVG++ER+ 
Sbjct: 35   ESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTV 94

Query: 2477 AAVLAPLIDAGAIIVEGIVPNTPFGKSRYKLPCQVHIFSKRDVFPIVQATISSSGLMLIS 2298
            AAVLAPLID+  IIVEGIVPNT    +R+K+PCQ+H+F+K +    V++TIS  GL+LIS
Sbjct: 95   AAVLAPLIDSHTIIVEGIVPNTRSNSNRFKIPCQIHVFAKLEASSTVKSTISRGGLVLIS 154

Query: 2297 TSDPLIELXXXXXXXXXXXXXXXXXIDEIFKLVGADEDKKGANNAMDPPKNFIKSDLFMH 2118
             SD    L                 +D+IFKLV  +   KG   A++PP+  IKS+LF H
Sbjct: 155  DSDTAFGLSEAVVVKEQMGNGDKKSVDKIFKLVDRNVKLKGKLVAVEPPREVIKSELFAH 214

Query: 2117 QKEGLGWLVHRETCQDLPPFWEEKDGVYTNVLTNYHSDERPEPLQGGILADDMGLGKTLT 1938
            QKEGLGWL++RE   +LPPFWEEKDG + N LTNY SD+RPEPL+GG+ ADDMGLGKTLT
Sbjct: 215  QKEGLGWLLYREKSGELPPFWEEKDGEFLNTLTNYRSDKRPEPLRGGVFADDMGLGKTLT 274

Query: 1937 LLSLIATNRPGSPRSSSVRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTYCDNSG 1758
            LLSLIA +R G+  +S+                                       D+  
Sbjct: 275  LLSLIAFDRYGNASTST---PTKEPLDVEGDKIEKKGKKRGRGKSSESRTRKKLKPDDVV 331

Query: 1757 EMEFVSKATLVVCPPVVFSTWISQLGEHTRPGSFKVYMYYK-DRTKDAKELEKYDLVLTT 1581
             M    K TL+VCPP V S WI+QL EHT  GS KVYMY+  +RT D  EL KYDLVLTT
Sbjct: 332  GMNVSQKTTLIVCPPSVISAWITQLEEHTVQGSLKVYMYHGGERTDDVNELMKYDLVLTT 391

Query: 1580 YSTLAAEANWEDSPMKKIEWFRIILDEAHLIKNAEAQQSKAVIALKAKRRWVVTGTPIQN 1401
            YSTLA E +WEDSP+KK+EW RIILDEAH IKNA AQQS+ V  LKA RRW VTGTPIQN
Sbjct: 392  YSTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVSKLKASRRWAVTGTPIQN 451

Query: 1400 GSLDLFSLMAFLKFEPFSTKTHWLSLVQRPLSQGNESGLSRLQILMATISLRRVKDSTLV 1221
            GS DL+SLMAFL+FEPFS K++W SL+QRPL QGN+ GLSRLQ+LMATISLRR K+ +L+
Sbjct: 452  GSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLI 511

Query: 1220 GLPPKTIETCFVELSAQERELYDQMEIEARTLVQAYIRVDSVMRNYSTVLSIILRLRQIC 1041
            GLPPKT+ETC+VELS +ER+LYD ME EA+ +VQ  I   S+MRNYSTVLSIILRLRQ+C
Sbjct: 512  GLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLC 571

Query: 1040 DDVALY-PDIKSLLPSNNIEDVSNNPDLLKKLVAMLQDGDDFDCPICICPPTNTVITCCA 864
            DD++L  P+++S   S ++EDV + P+LL+KL+A+LQDG+DFDCPICI PPTN +IT CA
Sbjct: 572  DDISLCPPELRSFTTSTSVEDVIDKPELLQKLIAVLQDGEDFDCPICISPPTNIIITRCA 631

Query: 863  HIFCRACILKALKRPNPSCPLCRQSLSESDLFSAPPPEPSES--DGAILPSREISSKVSA 690
            HIFCRACIL+ L+R  P CPLCR SL++SDL++APPP P +S  DG    S   SSKVSA
Sbjct: 632  HIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDDSNTDGEDTKSSTKSSKVSA 691

Query: 689  LLKLIVADREHDPSTKSVIFSQFRKMLILLEEPLKASGFMILKLDGSMSAKKRAEVIKEF 510
            LL L++A R+  P+TKSV+FSQFRKML+LLE PLKA+GF IL+LDG+M+ KKR +VI EF
Sbjct: 692  LLSLLIASRQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEF 751

Query: 509  SSQDSGTPTVLLASLKASGAGINLTIASRVYLLEPWWNPAVEEQAMDRVHRIGQTKDVKI 330
             + +   P VLLASLKASGAGINLT ASRVYLL+PWWNPAVEEQAMDR+HRIGQ ++VK+
Sbjct: 752  GNPELTGPVVLLASLKASGAGINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQKQEVKM 811

Query: 329  VRLITKNSIEERILELQNKKKELAQEAFKKRSSKDVRQIGVEDLRVLMAM 180
            +R+I ++SIEER+LELQ KKK LA EAFK+R  KD R++ VED+  LM++
Sbjct: 812  IRMIARDSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVIALMSL 861


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  989 bits (2557), Expect = 0.0
 Identities = 501/830 (60%), Positives = 619/830 (74%), Gaps = 4/830 (0%)
 Frame = -3

Query: 2657 EFFMVGFVIVNIVGLQHYSGRISGREMVGLDREPLNPYDTNAMKVLNMRRVQVGYVERSA 2478
            E +++GFVI NIVGL++YSGRI+GREMVGL REPLN YD NA++VLN R  QVG++ER+ 
Sbjct: 36   ESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIRVLNTRSEQVGHIERTV 95

Query: 2477 AAVLAPLIDAGAIIVEGIVPNTPFGKSRYKLPCQVHIFSKRDVFPIVQATISSSGLMLIS 2298
            AAVLAP+ID+  I+VEGIVPNT    +RY++PCQ+H+F+K +    V++TIS  GL+LIS
Sbjct: 96   AAVLAPMIDSHTIVVEGIVPNTRSNSNRYRIPCQIHVFAKLEASSTVKSTISRGGLVLIS 155

Query: 2297 TSDPLIELXXXXXXXXXXXXXXXXXIDEIFKLVGADEDKKGANNAMDPPKNFIKSDLFMH 2118
             SD    L                 +D+IFKLV  +    G   A +PP+  IKS+LF H
Sbjct: 156  ESDTSFGLSEAVVVKEQMGNGDKRSVDKIFKLVDENVKLMGKLVAAEPPREVIKSELFAH 215

Query: 2117 QKEGLGWLVHRETCQDLPPFWEEKDGVYTNVLTNYHSDERPEPLQGGILADDMGLGKTLT 1938
            QKEGLGWL+HRE   +LPPFWEEKDG + N LTNY SD+RP+PL+GG+ ADDMGLGKTLT
Sbjct: 216  QKEGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLT 275

Query: 1937 LLSLIATNRPGSPRSSSVRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTYCDNSG 1758
            LLSLIA +R G+  +S+                                       D+  
Sbjct: 276  LLSLIAFDRYGNASTST---PTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVV 332

Query: 1757 EMEFVSKATLVVCPPVVFSTWISQLGEHTRPGSFKVYMYYK-DRTKDAKELEKYDLVLTT 1581
             M    K TL+VCPP V S WI+QL EHT PG  KVYMY+  +RT D  EL KYD+VLTT
Sbjct: 333  GMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTT 392

Query: 1580 YSTLAAEANWEDSPMKKIEWFRIILDEAHLIKNAEAQQSKAVIALKAKRRWVVTGTPIQN 1401
            Y TLA E +WEDSP+KK+EW RIILDEAH IKNA AQQS+ V  LKA RRW VTGTPIQN
Sbjct: 393  YGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQN 452

Query: 1400 GSLDLFSLMAFLKFEPFSTKTHWLSLVQRPLSQGNESGLSRLQILMATISLRRVKDSTLV 1221
            GS DL+SLMAFL+FEPFS K++W SL+QRPL QGN+ GLSRLQ+LMATISLRR K+ +L+
Sbjct: 453  GSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLI 512

Query: 1220 GLPPKTIETCFVELSAQERELYDQMEIEARTLVQAYIRVDSVMRNYSTVLSIILRLRQIC 1041
            GLPPKT+ETC+VELS +ER+LYD ME EA+ +VQ  I   S+MRNYSTVLSIILRLRQ+C
Sbjct: 513  GLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLC 572

Query: 1040 DDVALY-PDIKSLLPSNNIEDVSNNPDLLKKLVAMLQDGDDFDCPICICPPTNTVITCCA 864
            DD++L  P+++S   S ++EDV++ P+LL+KLVA LQDG+DFDCPICI PPTN +IT CA
Sbjct: 573  DDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCA 632

Query: 863  HIFCRACILKALKRPNPSCPLCRQSLSESDLFSAPPPEP--SESDGAILPSREISSKVSA 690
            HIFCRACIL+ L+R  P CPLCR SL++SDL++APPP P  S +DG    S   SSKVSA
Sbjct: 633  HIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSA 692

Query: 689  LLKLIVADREHDPSTKSVIFSQFRKMLILLEEPLKASGFMILKLDGSMSAKKRAEVIKEF 510
            LL L++A R+ +P+TKSV+FSQFRKML+LLE PLKA+GF IL+LDG+M+ KKR +VI EF
Sbjct: 693  LLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 752

Query: 509  SSQDSGTPTVLLASLKASGAGINLTIASRVYLLEPWWNPAVEEQAMDRVHRIGQTKDVKI 330
             + +   P VLLASLKASG GINLT ASRVYL +PWWNPAVEEQAMDR+HRIGQ ++VK+
Sbjct: 753  GNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKM 812

Query: 329  VRLITKNSIEERILELQNKKKELAQEAFKKRSSKDVRQIGVEDLRVLMAM 180
            +R+I +NSIEER+LELQ KKK LA EAFK+R  KD R++ VED+  LM++
Sbjct: 813  IRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 862


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  989 bits (2557), Expect = 0.0
 Identities = 501/830 (60%), Positives = 619/830 (74%), Gaps = 4/830 (0%)
 Frame = -3

Query: 2657 EFFMVGFVIVNIVGLQHYSGRISGREMVGLDREPLNPYDTNAMKVLNMRRVQVGYVERSA 2478
            E +++GFVI NIVGL++YSGRI+GREMVGL REPLN YD NA++VLN R  QVG++ER+ 
Sbjct: 55   ESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIRVLNTRSEQVGHIERTV 114

Query: 2477 AAVLAPLIDAGAIIVEGIVPNTPFGKSRYKLPCQVHIFSKRDVFPIVQATISSSGLMLIS 2298
            AAVLAP+ID+  I+VEGIVPNT    +RY++PCQ+H+F+K +    V++TIS  GL+LIS
Sbjct: 115  AAVLAPMIDSHTIVVEGIVPNTRSNSNRYRIPCQIHVFAKLEASSTVKSTISRGGLVLIS 174

Query: 2297 TSDPLIELXXXXXXXXXXXXXXXXXIDEIFKLVGADEDKKGANNAMDPPKNFIKSDLFMH 2118
             SD    L                 +D+IFKLV  +    G   A +PP+  IKS+LF H
Sbjct: 175  ESDTSFGLSEAVVVKEQMGNGDKRSVDKIFKLVDENVKLMGKLVAAEPPREVIKSELFAH 234

Query: 2117 QKEGLGWLVHRETCQDLPPFWEEKDGVYTNVLTNYHSDERPEPLQGGILADDMGLGKTLT 1938
            QKEGLGWL+HRE   +LPPFWEEKDG + N LTNY SD+RP+PL+GG+ ADDMGLGKTLT
Sbjct: 235  QKEGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLT 294

Query: 1937 LLSLIATNRPGSPRSSSVRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTYCDNSG 1758
            LLSLIA +R G+  +S+                                       D+  
Sbjct: 295  LLSLIAFDRYGNASTST---PTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVV 351

Query: 1757 EMEFVSKATLVVCPPVVFSTWISQLGEHTRPGSFKVYMYYK-DRTKDAKELEKYDLVLTT 1581
             M    K TL+VCPP V S WI+QL EHT PG  KVYMY+  +RT D  EL KYD+VLTT
Sbjct: 352  GMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTT 411

Query: 1580 YSTLAAEANWEDSPMKKIEWFRIILDEAHLIKNAEAQQSKAVIALKAKRRWVVTGTPIQN 1401
            Y TLA E +WEDSP+KK+EW RIILDEAH IKNA AQQS+ V  LKA RRW VTGTPIQN
Sbjct: 412  YGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQN 471

Query: 1400 GSLDLFSLMAFLKFEPFSTKTHWLSLVQRPLSQGNESGLSRLQILMATISLRRVKDSTLV 1221
            GS DL+SLMAFL+FEPFS K++W SL+QRPL QGN+ GLSRLQ+LMATISLRR K+ +L+
Sbjct: 472  GSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLI 531

Query: 1220 GLPPKTIETCFVELSAQERELYDQMEIEARTLVQAYIRVDSVMRNYSTVLSIILRLRQIC 1041
            GLPPKT+ETC+VELS +ER+LYD ME EA+ +VQ  I   S+MRNYSTVLSIILRLRQ+C
Sbjct: 532  GLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLC 591

Query: 1040 DDVALY-PDIKSLLPSNNIEDVSNNPDLLKKLVAMLQDGDDFDCPICICPPTNTVITCCA 864
            DD++L  P+++S   S ++EDV++ P+LL+KLVA LQDG+DFDCPICI PPTN +IT CA
Sbjct: 592  DDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCA 651

Query: 863  HIFCRACILKALKRPNPSCPLCRQSLSESDLFSAPPPEP--SESDGAILPSREISSKVSA 690
            HIFCRACIL+ L+R  P CPLCR SL++SDL++APPP P  S +DG    S   SSKVSA
Sbjct: 652  HIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSA 711

Query: 689  LLKLIVADREHDPSTKSVIFSQFRKMLILLEEPLKASGFMILKLDGSMSAKKRAEVIKEF 510
            LL L++A R+ +P+TKSV+FSQFRKML+LLE PLKA+GF IL+LDG+M+ KKR +VI EF
Sbjct: 712  LLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 771

Query: 509  SSQDSGTPTVLLASLKASGAGINLTIASRVYLLEPWWNPAVEEQAMDRVHRIGQTKDVKI 330
             + +   P VLLASLKASG GINLT ASRVYL +PWWNPAVEEQAMDR+HRIGQ ++VK+
Sbjct: 772  GNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKM 831

Query: 329  VRLITKNSIEERILELQNKKKELAQEAFKKRSSKDVRQIGVEDLRVLMAM 180
            +R+I +NSIEER+LELQ KKK LA EAFK+R  KD R++ VED+  LM++
Sbjct: 832  IRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 881