BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020035
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
ref|XP_002511922.1| pentatricopeptide repeat-containing protein,...   111   1e-22
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002878387.1| pentatricopeptide repeat-containing protein ...    66   6e-09

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
           gi|297745328|emb|CBI40408.3| unnamed protein product
           [Vitis vinifera]
          Length = 765

 Score =  125 bits (313), Expect = 8e-27
 Identities = 67/154 (43%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
 Frame = +1

Query: 178 LVKLLQSNDDNWNEEQLLQL-----TSSIPPSRVPQIFRRLENIAKSFKFLQWLQNNSPS 342
           +V+LLQ+ D++WNE++L QL     +   PP  + QI R L + AK+ KF  W+Q NSP 
Sbjct: 57  VVELLQTTDNDWNEDKLHQLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPC 116

Query: 343 ILPTSQSIVYQTLFEHACREKHSHLKLYEILQTSKAQNVSLCIHSATILIRHFAQARMIT 522
                 S   + +FEHA RE +SH KL ++ +TSK+  + L +++AT+LIR F +A+M+ 
Sbjct: 117 QDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVD 176

Query: 523 EMFEVFNDVDPSIKNTHLCNTLLDVLCRLGRVVD 624
           E F V+N++ PS + TH+ N L+DVL R GRV D
Sbjct: 177 ESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDD 210


>ref|XP_002511922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549102|gb|EEF50591.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 346

 Score =  111 bits (277), Expect = 1e-22
 Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
 Frame = +1

Query: 172 RELVKLLQSNDDNWNEEQLLQLTSSI---PPSRVPQIFRRLENIAKSFKFLQWLQNNSPS 342
           +  V+LLQ  D  WN  QL  L  S     P  + QI RRL + +++ KFL++LQNN P+
Sbjct: 62  KRAVQLLQIPDHEWNTTQLNNLIFSALSPSPRLLFQIARRLPSSSQALKFLKYLQNNFPT 121

Query: 343 ILPTSQSIVYQTLFEHACREKHSHLKLYEILQTSKAQNVSLCIHSATILIRHFAQARMIT 522
                 S  +Q +FE A RE  S   LYE+ + SK  N+ L I+SAT+L+R F +  ++ 
Sbjct: 122 SNTQHLSSTFQAIFELASRENDSRTNLYELYKVSKEWNIPLTINSATLLLRFFGRIGLVE 181

Query: 523 EMFEVFNDVDPSIKNTHLCNTLLDVLCRLGRVVD 624
           + F +FN+++  IKNTH+ N ++D+L R GRV D
Sbjct: 182 KSFILFNELEHCIKNTHVRNLMVDLLLRDGRVDD 215


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  110 bits (274), Expect = 3e-22
 Identities = 66/159 (41%), Positives = 99/159 (62%), Gaps = 9/159 (5%)
 Frame = +1

Query: 175 ELVKLLQSNDDNWNEEQLLQL--TSSIPPSRVPQIF----RRLENIAKSFKFLQWLQNNS 336
           E ++LLQ   + WN  QL QL  T S P S  P++F    RRL + +++ KFL +LQNNS
Sbjct: 51  EALQLLQIPGNEWNTTQLNQLLFTDSPPSSSSPRLFYQITRRLPSSSQALKFLNYLQNNS 110

Query: 337 PSILPTSQSIV---YQTLFEHACREKHSHLKLYEILQTSKAQNVSLCIHSATILIRHFAQ 507
           PS  P +QS++   +Q +FE A  E  S+  L  + +TSK  N+ L +++A+ L+R   +
Sbjct: 111 PSS-PDTQSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGR 169

Query: 508 ARMITEMFEVFNDVDPSIKNTHLCNTLLDVLCRLGRVVD 624
           + ++ E   +FND+DPS+KNT+L N  L +L R GRV D
Sbjct: 170 SELVEESLILFNDLDPSVKNTYLRNVWLSILLRSGRVKD 208


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
 Frame = +1

Query: 175 ELVKLLQSNDDNWNEEQLLQLT---SSIPPSRVPQIFRRLENIAKSFKFLQWLQNNSPSI 345
           ++V+LLQ   D+W+ ++L  +    S +      QI  +L +I KS +FL++L   +P  
Sbjct: 38  QVVELLQLPPDHWDHDKLHSILFNPSPLSSHHFLQITLQLSSIPKSLQFLKYLSAKAPQH 97

Query: 346 LPTSQSIVYQTLFEHACREKHSHLKLYEILQTSKAQNVSLCI--HSATILIRHFAQARMI 519
            P S S V+Q   E A R  +S   L  + +  K+ + +L +   SA++L++    AR++
Sbjct: 98  HPHSLSSVFQGSLELASRHPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARLV 157

Query: 520 TEMFEVFNDVDPSIKNTHLCNTLLDVLCRLGRVVD 624
            +   +FN +DPS K+  LC+ LL VL + GR  D
Sbjct: 158 NDSLLLFNQLDPSSKSPQLCHGLLRVLLKSGRAGD 192


>ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324225|gb|EFH54646.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 766

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
 Frame = +1

Query: 226 LLQLTSSIPPSRVPQIFRRLENIAKSFKFLQWLQNNSPSIL--PTSQSIVYQTLFEHACR 399
           LL  +SS  P    QI RRL + + +  F ++L + S S+     S S+  Q++ E A  
Sbjct: 69  LLVSSSSHSPLVFSQITRRLGSYSLAISFFEYLDSKSQSLKRREESLSLALQSVIEFAGS 128

Query: 400 EKHSHLKLYEILQTSKAQNVSLCIHSATILIRHFAQARMITEMFEVFNDVDPSIKNTHLC 579
           E  S  KL  + + +K +N+ L + +  +LIR F +  M  +   V+  +D ++KN+ + 
Sbjct: 129 EPDSRDKLLRLYEIAKEKNIPLTVVATKLLIRWFGRMGMANQSVLVYERLDSNMKNSQVR 188

Query: 580 NTLLDVLCRLGRVVD 624
           N ++DVL R G V D
Sbjct: 189 NVVIDVLLRNGLVDD 203