BLASTX nr result

ID: Cimicifuga21_contig00020010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020010
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15382.1| AGO4B [Solanum lycopersicum]                           176   2e-42
gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]                175   4e-42
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                171   6e-41
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   171   7e-41
ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...   170   1e-40

>gb|AFV15382.1| AGO4B [Solanum lycopersicum]
          Length = 913

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/107 (75%), Positives = 96/107 (89%)
 Frame = -2

Query: 322 KPKRLPMARPGFARRGQPIPLLTNHFKVNVGSVDGDFYHYSVSLAYDDGRPVEGKGVGRK 143
           K  R+PMAR G   +GQ IP+LTNHFKVNV +VDG F+HYSV+L Y+DGRPVEGKG+GRK
Sbjct: 36  KVLRVPMARRGLGSKGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRK 95

Query: 142 VIDKLQETYDTELAGKDFAYDGEKSLFTVGSLPQNKLEFTVVLEDIS 2
           V+D++ ETYDTELAGKDFAYDGEKSLFT+GSLP+NKLEFTVVL+DI+
Sbjct: 96  VLDRVHETYDTELAGKDFAYDGEKSLFTIGSLPRNKLEFTVVLDDIT 142


>gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]
          Length = 912

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/106 (75%), Positives = 95/106 (89%)
 Frame = -2

Query: 322 KPKRLPMARPGFARRGQPIPLLTNHFKVNVGSVDGDFYHYSVSLAYDDGRPVEGKGVGRK 143
           K  R+PM+R G   +GQ IP+LTNHFKVNV +VDG F+HYSV+L Y+DGRPVEGKG+GRK
Sbjct: 36  KVLRVPMSRRGLGSKGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRK 95

Query: 142 VIDKLQETYDTELAGKDFAYDGEKSLFTVGSLPQNKLEFTVVLEDI 5
           V+D++ ETYDTELAGKDFAYDGEKSLFT+GSLP+NKLEFTVVLED+
Sbjct: 96  VLDRVHETYDTELAGKDFAYDGEKSLFTIGSLPRNKLEFTVVLEDV 141


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/104 (75%), Positives = 94/104 (90%)
 Frame = -2

Query: 313 RLPMARPGFARRGQPIPLLTNHFKVNVGSVDGDFYHYSVSLAYDDGRPVEGKGVGRKVID 134
           RLPMAR G   +GQ I +LTNHFKVNV +VDG F+HYSV+L Y+DGRPV+GKGVGRKV+D
Sbjct: 40  RLPMARRGLGNKGQKIQILTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLD 99

Query: 133 KLQETYDTELAGKDFAYDGEKSLFTVGSLPQNKLEFTVVLEDIS 2
           ++ ETYDTELAGKDFAYDGEKSLFT+G+LP+NK+EFTVVLED++
Sbjct: 100 RVHETYDTELAGKDFAYDGEKSLFTIGALPRNKMEFTVVLEDVT 143


>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/107 (74%), Positives = 93/107 (86%)
 Frame = -2

Query: 322 KPKRLPMARPGFARRGQPIPLLTNHFKVNVGSVDGDFYHYSVSLAYDDGRPVEGKGVGRK 143
           K  R+P+AR GFA +GQ I L TNHFKVNV   DG F+HYSVSL+Y+DGRPV+GKG+GRK
Sbjct: 40  KVARVPIARRGFASKGQKIALTTNHFKVNVTGADGHFFHYSVSLSYEDGRPVDGKGIGRK 99

Query: 142 VIDKLQETYDTELAGKDFAYDGEKSLFTVGSLPQNKLEFTVVLEDIS 2
           VID++ ETYD+EL GKDFAYDGEKSLFTVG LP+NKLEFTVVLED+S
Sbjct: 100 VIDRVHETYDSELGGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVS 146


>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
           sativus]
          Length = 915

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/107 (75%), Positives = 96/107 (89%)
 Frame = -2

Query: 322 KPKRLPMARPGFARRGQPIPLLTNHFKVNVGSVDGDFYHYSVSLAYDDGRPVEGKGVGRK 143
           K  R+P+AR G A +GQ I LLTNHFKVNV +++G F+HYSV+LAY+DGRPV+GKGVGRK
Sbjct: 45  KVVRVPIARRGLASKGQKISLLTNHFKVNVTNIEGHFFHYSVALAYEDGRPVDGKGVGRK 104

Query: 142 VIDKLQETYDTELAGKDFAYDGEKSLFTVGSLPQNKLEFTVVLEDIS 2
           VIDK+ ETY++ELAGKDFAYDGEKSLFTVG LP+NKLEFTVVLEDI+
Sbjct: 105 VIDKVHETYNSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDIT 151


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