BLASTX nr result
ID: Cimicifuga21_contig00019961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00019961
(1651 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251... 526 e-169
ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|2... 505 e-161
ref|XP_002527885.1| RNA binding protein, putative [Ricinus commu... 503 e-159
ref|XP_003550888.1| PREDICTED: uncharacterized protein LOC100784... 508 e-159
ref|NP_177575.1| intron maturase, type II-like protein [Arabidop... 474 e-150
>ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251856 [Vitis vinifera]
Length = 1440
Score = 526 bits (1355), Expect(2) = e-169
Identities = 261/422 (61%), Positives = 326/422 (77%), Gaps = 4/422 (0%)
Frame = -3
Query: 1385 VVLELKCEIEKYMQNSLYLDMDG-TQILPFDSPRGVRFLGTIVHTSITESPAVRAVHKLK 1209
+ +E K EI YMQNSL+LD+ +++LP P G++FLGT+V S+ ESP VRAVHKLK
Sbjct: 1019 IAIEFKSEILNYMQNSLHLDVSNQSELLPCHGPHGIQFLGTLVKRSVRESPTVRAVHKLK 1078
Query: 1208 EKVQLFASQKEELMN---VRIGKQWLAHGLNKVKESEIKHLADSNSVLSKISQFCIFGMK 1038
EKV+LFASQK+E + +RIGK+WLAHGL KVKESEI+HLAD++SVLS+IS F GM+
Sbjct: 1079 EKVRLFASQKQEAWDAGTLRIGKKWLAHGLKKVKESEIRHLADTDSVLSQISCFRKTGME 1138
Query: 1037 TDHWFMVLLQIWMQDVNAKNIDSEEEMLAKYIAEPSIPQELKDSFYNFKKLAEKYVSSET 858
TDHW+ +LL+IW+ DV AK ++E +L+KYIAEP +P+EL+DSFY F+K AE YV+SET
Sbjct: 1139 TDHWYKLLLKIWLHDVKAKAAENEGVILSKYIAEPLLPKELRDSFYEFQKRAEDYVASET 1198
Query: 857 SSTLALLPXXXXXXXXXXXTEIVVPVKVIKKRLLRYGLVSREGYPRPTSSXXXXXXXXXX 678
+S LALLP +I+ PV VIKKRLLRY L + +GYP +
Sbjct: 1199 ASMLALLPNSKSCTESVPIIKIIAPVNVIKKRLLRYRLTNAKGYPCASPMLILQDDIQIV 1258
Query: 677 DWFTGLSRRWLRWYNECDNFGEIKLMVINEVRMSCIRTLAAKHRIHETKIEKLFESELSG 498
DWF+GL+RRWL WY+ECDNF E+KL++ +++R SCIRTLAAK+R+HET+IEK ++EL
Sbjct: 1259 DWFSGLARRWLIWYSECDNFSEVKLIICDQLRKSCIRTLAAKYRLHETEIEKRSDTELCR 1318
Query: 497 IPSTQELELEMLKETSDSQVFDNDEALNYGISNSGLCLLSLARMVSPSRPCNCFVVGCCE 318
IPST E+E E + ETSDSQ D +EAL YGIS SGLCLLSLARMVS SR CNCFV+GC
Sbjct: 1319 IPSTLEIEQEKVNETSDSQASDTNEALMYGISYSGLCLLSLARMVSQSRRCNCFVMGCLA 1378
Query: 317 AAPSVYTLHAMERQRFPGWKTGFLTAIHPSFNRRRIGLCKKHVKDLYMGHISLQSVDFTA 138
AAPSVYTLH MERQ+FPGWKTGF + IHPS N RRIGLCK+H+KDLY+GHISLQS++F A
Sbjct: 1379 AAPSVYTLHVMERQKFPGWKTGFSSCIHPSLNGRRIGLCKQHLKDLYLGHISLQSIEFGA 1438
Query: 137 WK 132
WK
Sbjct: 1439 WK 1440
Score = 96.7 bits (239), Expect(2) = e-169
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = -1
Query: 1651 LPQEGLLSPILMNIHLDLFDREFHRMCMKYEALGSNHA-DQEQEGSKLCHWFRCQLXXXX 1475
LPQEG+LSPILMNI+LDLFD EF+RM M+YEAL D ++ SKL WFR QL
Sbjct: 928 LPQEGVLSPILMNIYLDLFDHEFYRMSMRYEALDPGMCIDHDKSHSKLRSWFRRQLKGND 987
Query: 1474 XXXXXXXNFTCRLHACRFMDDIFVAISGSK 1385
+ R+H+CRFMD+IF AISGSK
Sbjct: 988 VKYTGRESSNFRVHSCRFMDEIFFAISGSK 1017
>ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|222855701|gb|EEE93248.1|
predicted protein [Populus trichocarpa]
Length = 738
Score = 505 bits (1301), Expect(2) = e-161
Identities = 249/422 (59%), Positives = 317/422 (75%), Gaps = 4/422 (0%)
Frame = -3
Query: 1385 VVLELKCEIEKYMQNSLYLDMDG-TQILPFDSPRGVRFLGTIVHTSITESPAVRAVHKLK 1209
V ++ K ++ Y+ N L+LD+D +ILP P+ + FLGT++ ++ ESPA+RA HKLK
Sbjct: 319 VAIDFKSDVVNYLHNCLHLDVDSEAEILPSAGPQAICFLGTLIRRTVKESPAIRAAHKLK 378
Query: 1208 EKVQLFASQKEELMNV---RIGKQWLAHGLNKVKESEIKHLADSNSVLSKISQFCIFGMK 1038
EKV+LFASQK+E +V RIGK+WLAHGL KVKESEIKHLAD +S+L++IS F GM+
Sbjct: 379 EKVKLFASQKQEAWDVGTVRIGKKWLAHGLRKVKESEIKHLADRSSLLNQISCFRKAGME 438
Query: 1037 TDHWFMVLLQIWMQDVNAKNIDSEEEMLAKYIAEPSIPQELKDSFYNFKKLAEKYVSSET 858
TDHW+ LL++WM+D+ K +SEE +L+KY+AEP++PQEL++SFY F+K AE+YV SET
Sbjct: 439 TDHWYKFLLKVWMKDIKTKAAESEEFVLSKYVAEPAVPQELRESFYEFQKHAEEYVKSET 498
Query: 857 SSTLALLPXXXXXXXXXXXTEIVVPVKVIKKRLLRYGLVSREGYPRPTSSXXXXXXXXXX 678
+ TLALLP EI+ PV IKKRLLRYGL S +G+ R +
Sbjct: 499 AMTLALLPRSSSSSETIT--EIIAPVNAIKKRLLRYGLTSSQGHSRAITQLILQDNIQII 556
Query: 677 DWFTGLSRRWLRWYNECDNFGEIKLMVINEVRMSCIRTLAAKHRIHETKIEKLFESELSG 498
DWF+G+ RWLRW+++ NF E++L++ N+VR SCIRTLAAK+R+HE+ IEK F+ ELS
Sbjct: 557 DWFSGIVCRWLRWFSDYQNFAELELIIRNQVRKSCIRTLAAKYRVHESAIEKRFDLELSR 616
Query: 497 IPSTQELELEMLKETSDSQVFDNDEALNYGISNSGLCLLSLARMVSPSRPCNCFVVGCCE 318
IPSTQE E EM E S FDNDEAL YGIS SGLCLLSL RMVS SRPC CFV+GC
Sbjct: 617 IPSTQEEEQEMENEKPHSLAFDNDEALMYGISYSGLCLLSLTRMVSQSRPCGCFVMGCPA 676
Query: 317 AAPSVYTLHAMERQRFPGWKTGFLTAIHPSFNRRRIGLCKKHVKDLYMGHISLQSVDFTA 138
AAPSVYT+H MERQ+FPGWKTGF T IHPS N+RRIGLCK+H+ DLY+G ISLQS+DF++
Sbjct: 677 AAPSVYTIHVMERQKFPGWKTGFSTCIHPSLNKRRIGLCKQHLTDLYVGQISLQSIDFSS 736
Query: 137 WK 132
WK
Sbjct: 737 WK 738
Score = 92.8 bits (229), Expect(2) = e-161
Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = -1
Query: 1651 LPQEGLLSPILMNIHLDLFDREFHRMCMKYEALGSN-HADQEQEGSKLCHWFRCQLXXXX 1475
LPQEG+LSPILMNI+LD+FD E HR+ MKYEAL + H EQ SKL WFR QL
Sbjct: 230 LPQEGVLSPILMNIYLDVFDHELHRLSMKYEALNPDVHFGGEQLHSKLRSWFRRQLKGND 289
Query: 1474 XXXXXXXNFTCRLHACRFMDDIFVAISGSK 1385
R+H+CRFMD++F A+SGSK
Sbjct: 290 IKNSSKEG--SRIHSCRFMDELFFAVSGSK 317
>ref|XP_002527885.1| RNA binding protein, putative [Ricinus communis]
gi|223532736|gb|EEF34516.1| RNA binding protein, putative
[Ricinus communis]
Length = 715
Score = 503 bits (1296), Expect(2) = e-159
Identities = 249/422 (59%), Positives = 311/422 (73%), Gaps = 4/422 (0%)
Frame = -3
Query: 1385 VVLELKCEIEKYMQNSLYLDMDG-TQILPFDSPRGVRFLGTIVHTSITESPAVRAVHKLK 1209
V K EI Y+Q L LD+ T+I+PF P+ +RFLG ++ + +SPAVRAVHKLK
Sbjct: 296 VARSFKSEIADYLQKILLLDVASETEIVPFSGPQAIRFLGNLIRKRVKDSPAVRAVHKLK 355
Query: 1208 EKVQLFASQKEELMNV---RIGKQWLAHGLNKVKESEIKHLADSNSVLSKISQFCIFGMK 1038
+KVQ FASQK+E +V RIG++WLAHGL KVKESEIKHLADS+S+L++IS F GM+
Sbjct: 356 DKVQAFASQKQEAWDVGTIRIGRKWLAHGLRKVKESEIKHLADSSSLLNQISCFRKAGME 415
Query: 1037 TDHWFMVLLQIWMQDVNAKNIDSEEEMLAKYIAEPSIPQELKDSFYNFKKLAEKYVSSET 858
TDHW+ +LL+IWMQD+ AK +E+ +L+KY+AEP++PQEL+DSF+ F+ A+ YV+SET
Sbjct: 416 TDHWYKLLLKIWMQDIEAKEAKTEDYILSKYVAEPALPQELRDSFHEFQMCAKGYVNSET 475
Query: 857 SSTLALLPXXXXXXXXXXXTEIVVPVKVIKKRLLRYGLVSREGYPRPTSSXXXXXXXXXX 678
++ LALLP EI+ PV VI KRLLRYGL++ EG+ R
Sbjct: 476 AAILALLPNTRSCSEMIT--EIIAPVNVIMKRLLRYGLITSEGHSRVNPQLVLQDKTHII 533
Query: 677 DWFTGLSRRWLRWYNECDNFGEIKLMVINEVRMSCIRTLAAKHRIHETKIEKLFESELSG 498
WF+G+ RRW RWY C+NF +I+L+V N+V SCIRTLAAK+RIHE ++EK F+ ELS
Sbjct: 534 YWFSGIIRRWHRWYGHCENFADIELIVKNQVWQSCIRTLAAKYRIHENEVEKQFDLELSS 593
Query: 497 IPSTQELELEMLKETSDSQVFDNDEALNYGISNSGLCLLSLARMVSPSRPCNCFVVGCCE 318
I TQE + EM E +S F+NDE L YGIS SGLCLLSLARMVS SRPCNCFV+GC
Sbjct: 594 ILLTQETDQEMTTENPNSLAFENDEGLMYGISYSGLCLLSLARMVSLSRPCNCFVMGCSA 653
Query: 317 AAPSVYTLHAMERQRFPGWKTGFLTAIHPSFNRRRIGLCKKHVKDLYMGHISLQSVDFTA 138
AAPS+YTLH MERQ+FPGWKTGF T IHPS NRRRIGLC KH+KD Y GHISLQS+DF +
Sbjct: 654 AAPSIYTLHVMERQKFPGWKTGFSTCIHPSLNRRRIGLCNKHLKDFYFGHISLQSIDFGS 713
Query: 137 WK 132
WK
Sbjct: 714 WK 715
Score = 88.2 bits (217), Expect(2) = e-159
Identities = 43/90 (47%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = -1
Query: 1651 LPQEGLLSPILMNIHLDLFDREFHRMCMKYEALGSN-HADQEQEGSKLCHWFRCQLXXXX 1475
LPQEG+LSPIL+NI+ +FD E R+ MKYEAL S+ + + EQ SKL +WFR Q+
Sbjct: 205 LPQEGVLSPILINIYFSVFDSEIDRLSMKYEALNSSLNVNGEQRNSKLRNWFRRQIKGND 264
Query: 1474 XXXXXXXNFTCRLHACRFMDDIFVAISGSK 1385
+F+ R+++CRFMD++F A+SG++
Sbjct: 265 LKNVAEESFSPRIYSCRFMDELFFAVSGTE 294
>ref|XP_003550888.1| PREDICTED: uncharacterized protein LOC100784683 [Glycine max]
Length = 739
Score = 508 bits (1308), Expect(2) = e-159
Identities = 248/416 (59%), Positives = 310/416 (74%), Gaps = 5/416 (1%)
Frame = -3
Query: 1364 EIEKYMQNSLYLDM-DGTQILPFDSPRGVRFLGTIVHTSITESPAVRAVHKLKEKVQLFA 1188
E+ Y+++SL LD+ D + P + P G+RFLGT+V ++ ES AV+AVHKLKEKV+LF
Sbjct: 323 EVRSYLKSSLLLDVRDQPDVFPCEGPHGIRFLGTLVKRTVRESSAVKAVHKLKEKVELFT 382
Query: 1187 SQKEELMN---VRIGKQWLAHGLNKVKESEIKHLADSNSVLSKISQFCIFGMKTDHWFMV 1017
QK E N VRIGK+WL HGL KVKESEIKHLADS+S+L+K+S F GM+TDHW+
Sbjct: 383 LQKVEAWNYGTVRIGKKWLGHGLKKVKESEIKHLADSSSLLNKVSSFRKSGMETDHWYKH 442
Query: 1016 LLQIWMQDVNAKNIDSEEEMLAKYIAEPSIPQELKDSFYNFKKLAEKYVSSETSSTLALL 837
LL+IWMQDV AKN SEE +L+K +AEP++PQEL DSFY F K AE Y+S+E S L LL
Sbjct: 443 LLKIWMQDVQAKNAKSEESILSKCVAEPALPQELNDSFYEFIKQAELYISAEADSILKLL 502
Query: 836 PXXXXXXXXXXXT-EIVVPVKVIKKRLLRYGLVSREGYPRPTSSXXXXXXXXXXDWFTGL 660
P EI+ P+ IK RLLRYGL + +G+PR + DWF+G+
Sbjct: 503 PNNNSSIEHPLAKTEIIAPIHAIKMRLLRYGLTTSKGFPRSANLLIMLDTTEIIDWFSGI 562
Query: 659 SRRWLRWYNECDNFGEIKLMVINEVRMSCIRTLAAKHRIHETKIEKLFESELSGIPSTQE 480
S RWL+W+ C NF EIKL++ N VR SCIRTLAAK+R+HET+IEK F+ ELS IPSTQ+
Sbjct: 563 SCRWLKWHENCANFDEIKLLISNHVRKSCIRTLAAKYRVHETEIEKQFDVELSRIPSTQD 622
Query: 479 LELEMLKETSDSQVFDNDEALNYGISNSGLCLLSLARMVSPSRPCNCFVVGCCEAAPSVY 300
+E EM+ E D+Q FDNDEAL YGI+ SGLCLLSLAR+V+ +RPCNCFV+GC +AP VY
Sbjct: 623 IEKEMINEALDAQAFDNDEALMYGIAYSGLCLLSLARIVTQARPCNCFVIGCSSSAPRVY 682
Query: 299 TLHAMERQRFPGWKTGFLTAIHPSFNRRRIGLCKKHVKDLYMGHISLQSVDFTAWK 132
TLH MERQ+ P WKTGF T IHPS N+RR+GLCK+H++DLY+GHISLQS+DF AWK
Sbjct: 683 TLHVMERQKSPSWKTGFSTCIHPSLNKRRVGLCKQHLRDLYLGHISLQSIDFRAWK 738
Score = 81.6 bits (200), Expect(2) = e-159
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = -1
Query: 1651 LPQEGLLSPILMNIHLDLFDREFHRMCMKYEAL--GSNHADQEQEGSKLCHWFRCQLXXX 1478
LPQEG+LSPILMNI+LDLFD EF R+ MKYE + G D ++ GS L WFR QL
Sbjct: 228 LPQEGVLSPILMNIYLDLFDSEFCRLSMKYEGICNGGGLNDGDRSGSMLRGWFRRQLDGN 287
Query: 1477 XXXXXXXXNFTCRLHACRFMDDIFVAISGSK 1385
++++CR MD++F A+SGSK
Sbjct: 288 DVVKSSG----VKVYSCRHMDEMFFAVSGSK 314
>ref|NP_177575.1| intron maturase, type II-like protein [Arabidopsis thaliana]
gi|12324793|gb|AAG52355.1|AC011765_7 putative type II
intron maturase; 7603-5342 [Arabidopsis thaliana]
gi|332197460|gb|AEE35581.1| intron maturase, type II-like
protein [Arabidopsis thaliana]
Length = 753
Score = 474 bits (1221), Expect(2) = e-150
Identities = 240/423 (56%), Positives = 305/423 (72%), Gaps = 5/423 (1%)
Frame = -3
Query: 1385 VVLELKCEIEKYMQNSLYLDM-DGTQILPFDSPRGVRFLGTIVHTSITESPAVRAVHKLK 1209
V +++ E +++NSL+LD+ D T P ++ G+R LGT+V ++ ESP V+AVHKLK
Sbjct: 331 VASDIRSEAIGFLRNSLHLDITDETDPSPCEATSGLRVLGTLVRKNVRESPTVKAVHKLK 390
Query: 1208 EKVQLFASQKEE---LMNVRIGKQWLAHGLNKVKESEIKHLADSNSVLSKISQFCIFGMK 1038
EKV+LFA QKEE L VRIGK+WL HGL KVKESEIK LADSNS LS+IS GM+
Sbjct: 391 EKVRLFALQKEEAWTLGTVRIGKKWLGHGLKKVKESEIKGLADSNSTLSQISCHRKAGME 450
Query: 1037 TDHWFMVLLQIWMQDVNAKNID-SEEEMLAKYIAEPSIPQELKDSFYNFKKLAEKYVSSE 861
TDHW+ +LL+IWM+DV + D SEE +L+K++ EP++PQEL+D+FY F+ A YVSSE
Sbjct: 451 TDHWYKILLRIWMEDVLRTSADRSEEFVLSKHVVEPTVPQELRDAFYKFQNAAAAYVSSE 510
Query: 860 TSSTLALLPXXXXXXXXXXXTEIVVPVKVIKKRLLRYGLVSREGYPRPTSSXXXXXXXXX 681
T++ ALLP ++V P I +RL RYGL++ +GY R S
Sbjct: 511 TANLEALLPCPQSHDRPVFFGDVVAPTNAIGRRLYRYGLITAKGYARSNSMLILLDTAQI 570
Query: 680 XDWFTGLSRRWLRWYNECDNFGEIKLMVINEVRMSCIRTLAAKHRIHETKIEKLFESELS 501
DW++GL RRW+ WY C NF EIK ++ N++RMSCIRTLAAK+RIHE +IEK + ELS
Sbjct: 571 IDWYSGLVRRWVIWYEGCSNFDEIKALIDNQIRMSCIRTLAAKYRIHENEIEKRLDLELS 630
Query: 500 GIPSTQELELEMLKETSDSQVFDNDEALNYGISNSGLCLLSLARMVSPSRPCNCFVVGCC 321
IPS +++E E+ E DS FD DE L YG+SNSGLCLLSLAR+VS SRPCNCFV+GC
Sbjct: 631 TIPSAEDIEQEIQHEKLDSPAFDRDEHLTYGLSNSGLCLLSLARLVSESRPCNCFVIGCS 690
Query: 320 EAAPSVYTLHAMERQRFPGWKTGFLTAIHPSFNRRRIGLCKKHVKDLYMGHISLQSVDFT 141
AAP+VYTLHAMERQ+FPGWKTGF I S N RRIGLCK+H+KDLY+G ISLQ+VDF
Sbjct: 691 MAAPAVYTLHAMERQKFPGWKTGFSVCIPSSLNGRRIGLCKQHLKDLYIGQISLQAVDFG 750
Query: 140 AWK 132
AW+
Sbjct: 751 AWR 753
Score = 85.5 bits (210), Expect(2) = e-150
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = -1
Query: 1651 LPQEGLLSPILMNIHLDLFDREFHRMCMKYEALG-SNHADQEQEGSKLCHWFRCQLXXXX 1475
LPQEG+LS +LMNI+LD FD EF+R+ M++EALG + D++ GSKL WFR Q
Sbjct: 240 LPQEGVLSRVLMNIYLDRFDHEFYRISMRHEALGLDSKTDEDSPGSKLRSWFRRQAGEQG 299
Query: 1474 XXXXXXXNFTCRLHACRFMDDIFVAISGSK 1385
+ R++ CRFMD+I+ ++SG K
Sbjct: 300 LKSTTEQDVALRVYCCRFMDEIYFSVSGPK 329