BLASTX nr result

ID: Cimicifuga21_contig00019949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019949
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309718.1| predicted protein [Populus trichocarpa] gi|2...   228   5e-58
ref|XP_002529090.1| Polygalacturonase precursor, putative [Ricin...   228   8e-58
ref|XP_002529091.1| Polygalacturonase precursor, putative [Ricin...   227   1e-57
dbj|BAC87792.1| putative polygalacturonase [Daucus carota]            225   6e-57
ref|XP_002529089.1| Polygalacturonase precursor, putative [Ricin...   223   3e-56

>ref|XP_002309718.1| predicted protein [Populus trichocarpa] gi|222852621|gb|EEE90168.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  228 bits (582), Expect = 5e-58
 Identities = 105/191 (54%), Positives = 142/191 (74%), Gaps = 1/191 (0%)
 Frame = +3

Query: 42  LKVCIVLSVLFISFQPSAASAI-FDVVKFGANPNGKTDSTQTFLKAWDGACGSTTSAQIY 218
           ++ C +L+ L I F PS A A  ++V+ +GA P+G+TDST+ FL AW  ACGS + + +Y
Sbjct: 5   IRNCFLLASLVIVFAPSLAGAAQYNVLNYGAKPDGRTDSTKAFLAAWTQACGSISRSTLY 64

Query: 219 VPSGMYLIKNVMFTGPCRNTGITFRIDGTIVAPSDYNIIGHSEHWISFKSVTGVSVYGGT 398
           VP G Y ++NV F+GPC+N  I  RIDG+++AP+DY +IG++ +WISF+ V GV+V GG 
Sbjct: 65  VPPGRYFLRNVQFSGPCKNNAILVRIDGSLLAPTDYRVIGNAANWISFQHVDGVTVSGGI 124

Query: 399 LDAKGTALWACKQGGKRCPEGATSLAFTSSTHIVINGLKSLNSQMFHIVINDCQNVDLRG 578
           LD  G+ LW CKQ GK CP GAT+L  ++S +IVI+GL SLNSQMFHIV+N C NV ++G
Sbjct: 125 LDGHGSGLWDCKQSGKNCPSGATTLGVSNSQNIVISGLHSLNSQMFHIVVNGCHNVRIQG 184

Query: 579 VTITAPGNSPN 611
           V ITA GNSPN
Sbjct: 185 VKITASGNSPN 195


>ref|XP_002529090.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223531441|gb|EEF33274.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 393

 Score =  228 bits (580), Expect = 8e-58
 Identities = 105/185 (56%), Positives = 140/185 (75%), Gaps = 1/185 (0%)
 Frame = +3

Query: 60  LSVLFISFQPSAASAI-FDVVKFGANPNGKTDSTQTFLKAWDGACGSTTSAQIYVPSGMY 236
           L++L + F  S A+A  ++V+ +GA P+G+TDST+ FL AW  ACGST    IYVPSG +
Sbjct: 12  LALLILLFTSSLATAAQYNVLSYGAKPDGRTDSTKAFLAAWTQACGSTKPPTIYVPSGKF 71

Query: 237 LIKNVMFTGPCRNTGITFRIDGTIVAPSDYNIIGHSEHWISFKSVTGVSVYGGTLDAKGT 416
            +K++ F GPC+N  I FRIDGT+VAPSDY +IG++ +W+ F+ V GV++ GG LD +G+
Sbjct: 72  FLKDLSFGGPCKNNAILFRIDGTLVAPSDYKVIGNAGYWLYFQHVNGVTISGGILDGQGS 131

Query: 417 ALWACKQGGKRCPEGATSLAFTSSTHIVINGLKSLNSQMFHIVINDCQNVDLRGVTITAP 596
            LWACK  GK CP GATSL F++S +I INGL S NSQMFHIVIN CQNV ++GVT++A 
Sbjct: 132 GLWACKASGKNCPSGATSLGFSNSKNIAINGLTSQNSQMFHIVINGCQNVKVQGVTVSAS 191

Query: 597 GNSPN 611
           G+SPN
Sbjct: 192 GDSPN 196


>ref|XP_002529091.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223531442|gb|EEF33275.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 392

 Score =  227 bits (579), Expect = 1e-57
 Identities = 107/189 (56%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
 Frame = +3

Query: 51  CIVLSVLFISFQP--SAASAIFDVVKFGANPNGKTDSTQTFLKAWDGACGSTTSAQIYVP 224
           CI+  VL +SF    + AS  ++V+ FGA P+GKTDS + FL AW  AC ST S+ IYVP
Sbjct: 7   CIIHVVLLVSFTSYSAMASVQYNVLNFGAKPDGKTDSAKAFLAAWTQACASTKSSTIYVP 66

Query: 225 SGMYLIKNVMFTGPCRNTGITFRIDGTIVAPSDYNIIGHSEHWISFKSVTGVSVYGGTLD 404
           +G + +  + F GPC+N  I F I GT+VAPSDY ++G +++WI F+ V GV+V GGTLD
Sbjct: 67  NGRFFLSKIAFQGPCKNNAIGFSIGGTLVAPSDYRVLGSAKNWIIFQHVNGVTVSGGTLD 126

Query: 405 AKGTALWACKQGGKRCPEGATSLAFTSSTHIVINGLKSLNSQMFHIVINDCQNVDLRGVT 584
            +GT LW+CK  GK CP GATSL FT+S +IVI GL SLNSQ+FHIVIN+CQNV ++GV 
Sbjct: 127 GQGTGLWSCKASGKSCPYGATSLEFTNSNNIVIKGLASLNSQLFHIVINECQNVKVQGVK 186

Query: 585 ITAPGNSPN 611
           I+A G+SPN
Sbjct: 187 ISASGSSPN 195


>dbj|BAC87792.1| putative polygalacturonase [Daucus carota]
          Length = 388

 Score =  225 bits (573), Expect = 6e-57
 Identities = 103/187 (55%), Positives = 138/187 (73%), Gaps = 1/187 (0%)
 Frame = +3

Query: 54  IVLSVLFISFQPSAASAIFDVVKFGANPNGKTDSTQTFLKAWDGACGSTTSAQIYVPSGM 233
           ++L    ++   S+A   +++++FGA   G++DS++  LKAW  AC +T  A IYVP G 
Sbjct: 6   LILIFFLLNSSTSSAMITYNILRFGAKSGGQSDSSKALLKAWGAACATTKPATIYVPPGR 65

Query: 234 YLIKNVMFTGP-CRNTGITFRIDGTIVAPSDYNIIGHSEHWISFKSVTGVSVYGGTLDAK 410
           +L+KNV F G  CRN  IT R+DGT+VAPSDYN++G S +WI F+ VTGVS+YGGTLD +
Sbjct: 66  FLLKNVYFYGEHCRNGAITIRVDGTLVAPSDYNVLGSSGNWIKFERVTGVSIYGGTLDGQ 125

Query: 411 GTALWACKQGGKRCPEGATSLAFTSSTHIVINGLKSLNSQMFHIVINDCQNVDLRGVTIT 590
           GT+LWACK  GK+CPEG TSLAF +S  I+I+GL SLNSQMFH+VI+ C NV L G+ ++
Sbjct: 126 GTSLWACKTSGKKCPEGITSLAFYNSNKIIISGLASLNSQMFHVVIDGCHNVKLDGIRVS 185

Query: 591 APGNSPN 611
           A G SPN
Sbjct: 186 ASGKSPN 192


>ref|XP_002529089.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223531440|gb|EEF33273.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 393

 Score =  223 bits (567), Expect = 3e-56
 Identities = 99/186 (53%), Positives = 138/186 (74%)
 Frame = +3

Query: 54  IVLSVLFISFQPSAASAIFDVVKFGANPNGKTDSTQTFLKAWDGACGSTTSAQIYVPSGM 233
           ++  ++F+     A +A F+V+ +GA P+G+TDST+ FL +W  ACGS   A +YVPSG 
Sbjct: 11  LIAFLIFLFTSSLATAARFNVLNYGAKPDGRTDSTKAFLASWKQACGSIKPATVYVPSGR 70

Query: 234 YLIKNVMFTGPCRNTGITFRIDGTIVAPSDYNIIGHSEHWISFKSVTGVSVYGGTLDAKG 413
           + +KNV F GPC++  I FRI+GT+ APSDY +IG++ +W+ FK V+GV+V GG LD +G
Sbjct: 71  FFLKNVEFQGPCKSNAILFRIEGTLFAPSDYRVIGNAGYWLYFKHVSGVTVSGGILDGQG 130

Query: 414 TALWACKQGGKRCPEGATSLAFTSSTHIVINGLKSLNSQMFHIVINDCQNVDLRGVTITA 593
             LW+CK  GK CP GA SL F++S +IVI+G+ SLNSQ FH+VIN CQNV ++GVT++A
Sbjct: 131 PGLWSCKSSGKNCPTGAASLGFSNSENIVISGVTSLNSQFFHMVINGCQNVKIQGVTVSA 190

Query: 594 PGNSPN 611
            GNSPN
Sbjct: 191 SGNSPN 196


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