BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019946
         (3453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...  1303   0.0  
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...  1295   0.0  
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...  1266   0.0  
ref|XP_002882790.1| photoperiod-independent early flowering 1 [A...  1246   0.0  
ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401...  1236   0.0  

>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score = 1303 bits (3372), Expect = 0.0
 Identities = 693/1078 (64%), Positives = 799/1078 (74%), Gaps = 16/1078 (1%)
 Frame = -3

Query: 3187 MTSKGPRPRLDHETKAKRQKALEAPREPRRPKTHWDHVLEEMLWLSKDFEAERKWKLALA 3008
            M SKGPR R+DHE++AKRQKALEAPREPRRPKTHWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 3007 KKIVIRASKNALDPATRGEKKVKEEEQRLRKVALTISKDVKKFWTKIEKLVLYXXXXXXX 2828
            KK+ +RASK  LD ATRGEKK+KEEEQRLRKVAL ISKDVKKFWTKIEKLVLY       
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 2827 XXXXXXXXXXXXXXLGQTERYSTMLAENLVDMPHPCKPTCPDSAMEQLSDQDK------- 2669
                          LGQTERYSTMLAENLVD   P K    +SA   +S Q K       
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLVD---PYKSAENNSAEHHMSIQCKDVHDVIN 177

Query: 2668 EEDRTELVESPGLSDRMNIDGDYDIQSEDELDDDEQTVEEDEALITADERQEELEALQNE 2489
            E    ++VE    SD  + D +YD+Q +DE +DDE+T+E+DEALIT +ERQEEL AL++E
Sbjct: 178  EPKEADVVEYQ--SDAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQEELAALRDE 235

Query: 2488 MDIPLEELLKRYSSG---TVSREGSPLKSERTAEQIQV-EENLSKVKGNHLSVGGDSHTR 2321
            MD+P+EELLKRY+     +V +E SP  SE   + ++  +EN   +    LSV     + 
Sbjct: 236  MDLPIEELLKRYAGDKGESVMKESSPEHSEDGGKIVRAGDENGDDL----LSVSKIGTSN 291

Query: 2320 SAYVTRHHSDVSNGSISMLDNYKPEVDSNQANNQLKGCKNLEKQPL-ISCSDEQEDGDYV 2144
            S+ V+    D SNG ++   N   + ++ Q+ N  +       +      +DE+EDGD++
Sbjct: 292  SSIVSGRRCDESNGDVATPTNNLSQCENGQSENLKEVPSETANEDFSYDFTDEEEDGDFL 351

Query: 2143 LAAXXXXXXXXXXXXXXXXXXXEGDTPLNEIELLQKESEMSVEELLARYKKDINSDEDAD 1964
            L                       D P +EI LLQKES M VEELLARYK+D + DED +
Sbjct: 352  LGIEDKDDETTLSEEEQLERVDAID-PKDEIALLQKESVMPVEELLARYKRDPSDDEDGE 410

Query: 1963 DEYGYASTDSEDLLDPPAVQHIEHEGKASPMNDPAVEQDNPCEFKQNSQPGAKLDEVEPQ 1784
             E  YAS  SE+  D P      HE       DPA+  D   E  ++ +  A +   E Q
Sbjct: 411  YESDYASALSENNSDSPV-----HEDAGQ--KDPAIPMD---EDIKSGEHLAAIQSQEEQ 460

Query: 1783 MKSD----EGKXXXXXXXXXXXXXXXAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLD 1616
             +S     E +               AQPTGNTFSTT VRTKFPFLLKY LREYQHIGLD
Sbjct: 461  WESPHENLEKRESEDIIADAAAAARSAQPTGNTFSTTSVRTKFPFLLKYSLREYQHIGLD 520

Query: 1615 WLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFL 1436
            WLVTMYEKRLNGILADEMGLGKTIMTISLLAHLAC+KGIWGPHLIVVPTSVMLNWETEFL
Sbjct: 521  WLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACDKGIWGPHLIVVPTSVMLNWETEFL 580

Query: 1435 KWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFKRKKWKYLILDE 1256
            KWCPAFKILTYFGSAKERK KRQGW+KPN FHVCITTYRLVIQDSK FKRKKWKYLILDE
Sbjct: 581  KWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDE 640

Query: 1255 AHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWF 1076
            AHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQSHQEFKDWF
Sbjct: 641  AHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWF 700

Query: 1075 SNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHVIYCRLSKRQRN 896
            SNPISGMVEG++KVNKEV+DRLHNVLRPF+LRRLKRDVEKQLP K EHVIYCRLSKRQRN
Sbjct: 701  SNPISGMVEGEEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRN 760

Query: 895  LYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGINMQLSS 716
            LYEDFIASSETQATLAS NFFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GI++QLSS
Sbjct: 761  LYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMRGIDIQLSS 820

Query: 715  SICTMLFSGPFTSVDLSGLGFLFTRLNFSMSSWESDEVRAISTPSSLIKERACLENIEII 536
            S+C+ML   PF++VDL GLG LFT L++SM++WESDEV+ I TP +LI ER  +  +E+I
Sbjct: 821  SVCSMLLPSPFSTVDLRGLGLLFTHLDYSMAAWESDEVQTIETPVTLIMERTDMAELEVI 880

Query: 535  GPRLRPNNDNRKRAHGSGIFEEIQKALWXXXXXXXXXXXASIAWWNSLQCRKKPMYGTNL 356
             P     +  +K+  G+ IFEEIQ A+W           A+IAWWNSL+C+K+P+Y T L
Sbjct: 881  RP-----HKCQKKLQGTNIFEEIQWAIWEERLKQTKEHAAAIAWWNSLRCKKRPIYSTTL 935

Query: 355  KDISTVKHPIFDIHFQKSNPSHYLNFSSKLADIVLSPVERFQRIIKLVECFMFAIPAARA 176
            +D+  ++HP+ DIH  K+NP  YL +SSKLADIVLSPVERFQ++  +VE FMFAIPAARA
Sbjct: 936  RDLVALRHPVNDIHQVKANPVSYL-YSSKLADIVLSPVERFQKMTDVVESFMFAIPAARA 994

Query: 175  PSPVCWCSKTEAPVFLHGSYKSKCTEDLAPLLSPVRPAIVRRQVYFPDRRLIQFDCGK 2
            PSPVCWCS +E  VFLH SYK KC+E L PLLSP+RPAIVRRQVYFPDRRLIQFDCGK
Sbjct: 995  PSPVCWCSTSETSVFLHPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGK 1052


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score = 1295 bits (3351), Expect = 0.0
 Identities = 682/1081 (63%), Positives = 799/1081 (73%), Gaps = 19/1081 (1%)
 Frame = -3

Query: 3187 MTSKGPRPRLDHETKAKRQKALEAPREPRRPKTHWDHVLEEMLWLSKDFEAERKWKLALA 3008
            M SKGPR R+DHE++AKRQKALEAPREPRRPKTHWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 3007 KKIVIRASKNALDPATRGEKKVKEEEQRLRKVALTISKDVKKFWTKIEKLVLYXXXXXXX 2828
            KK+ +RASK  LD ATRGEKK+KEEEQRLRKVAL ISKDVKKFWTKIEKLVLY       
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 2827 XXXXXXXXXXXXXXLGQTERYSTMLAENLVDMPHPCKPTCPDSAMEQLS-------DQDK 2669
                          LGQTERYSTMLAENL D   P K    +SA  + S       D   
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLGD---PYKSAENNSAEHRKSIHCKDVHDVIN 177

Query: 2668 EEDRTELVESPGLSDRMNIDGDYDIQSEDELDDDEQTVEEDEALITADERQEELEALQNE 2489
            E    ++VE    SD  + D +YD+QS+DEL+DDE+T+E+DEALIT +ERQEEL AL++E
Sbjct: 178  EPKEADVVEYQ--SDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDE 235

Query: 2488 MDIPLEELLKRYSSG---TVSREGSPLKSERTAEQIQVEENL----SKVKGNHLSVGGDS 2330
            MD+P++ELLKRY+     +V +  SP  SE   + ++  +      S+ + + LSV    
Sbjct: 236  MDLPIQELLKRYAGEKGESVMKGSSPEHSEDGGKIVRAGDGKKGLGSENRDDLLSVSKVD 295

Query: 2329 HTRSAYVTRHHSDVSNGSISMLDNYKPEVDSNQANNQLKGCKNLEKQPLI-SCSDEQEDG 2153
             + S+ V+    D SNG ++   N   + +  Q+ N  +       +      +DE+EDG
Sbjct: 296  TSNSSMVSGRRCDESNGDVATPTNNLSQCEDGQSENLKETPSETANEDFAYDFTDEEEDG 355

Query: 2152 DYVLAAXXXXXXXXXXXXXXXXXXXEGDTPLNEIELLQKESEMSVEELLARYKKDINSDE 1973
            D++L                       D P +EI LLQKES+M VEELLARYK+D + DE
Sbjct: 356  DFLLVTEDKDDETTLSEEEKMERVDTID-PKDEIALLQKESDMPVEELLARYKRDPSDDE 414

Query: 1972 DADDEYGYASTDSEDLLDPPAVQHIEHEGKASPMNDPAVEQDNPCEFKQNSQPGAKLDEV 1793
            D + E  YAS  SE   D P  Q    +  A PM++         + K      A +   
Sbjct: 415  DGEYESDYASALSEKHSDSPVHQDAGQKDPAIPMDE---------DIKSGEHLAATIQFQ 465

Query: 1792 EPQMKSD----EGKXXXXXXXXXXXXXXXAQPTGNTFSTTKVRTKFPFLLKYPLREYQHI 1625
            E Q +S     E +               AQPTGNTFSTT VRTKFPFLLKY LREYQHI
Sbjct: 466  EEQRESPRENLEKRESEDIIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHI 525

Query: 1624 GLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWET 1445
            GLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLAC+KGIWGPHLIVVPTSVMLNWET
Sbjct: 526  GLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACDKGIWGPHLIVVPTSVMLNWET 585

Query: 1444 EFLKWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFKRKKWKYLI 1265
            EFLKWCPAFKILTYFGSAKERK KRQGW+KPN FHVCITTYRLVIQDSK FKRKKWKYLI
Sbjct: 586  EFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLI 645

Query: 1264 LDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFK 1085
            LDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQSHQEFK
Sbjct: 646  LDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFK 705

Query: 1084 DWFSNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHVIYCRLSKR 905
            DWFSNPISGMV+G++K+NKEV+DRLHNVLRPF+LRRLKRDVEKQLP K EHVIYCRLSKR
Sbjct: 706  DWFSNPISGMVDGEEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKR 765

Query: 904  QRNLYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGINMQ 725
            QRNLYEDFIASSETQATLAS NFFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GI++Q
Sbjct: 766  QRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIDIQ 825

Query: 724  LSSSICTMLFSGPFTSVDLSGLGFLFTRLNFSMSSWESDEVRAISTPSSLIKERACLENI 545
            LSSS+C++L   PF++VDL GLG LFT L+ SM++WESDEV+ I TP++LI ER  +  +
Sbjct: 826  LSSSVCSILLPSPFSTVDLRGLGLLFTHLD-SMAAWESDEVQTIETPATLIMERTDMTEL 884

Query: 544  EIIGPRLRPNNDNRKRAHGSGIFEEIQKALWXXXXXXXXXXXASIAWWNSLQCRKKPMYG 365
            E+I P+       +K+  G+ IFEEIQ+A+W           A+IAWWNSL+C+++P+Y 
Sbjct: 885  EVIRPQ-----KCQKKLQGTNIFEEIQRAIWEERLKEAKERAAAIAWWNSLRCKRRPIYS 939

Query: 364  TNLKDISTVKHPIFDIHFQKSNPSHYLNFSSKLADIVLSPVERFQRIIKLVECFMFAIPA 185
            T L+D+ T++HP++DIH  K++P  YL +SSKLADIVLSPVERFQ++  +VE FMF+IPA
Sbjct: 940  TTLRDLVTLRHPVYDIHQVKADPVSYL-YSSKLADIVLSPVERFQKMTDVVESFMFSIPA 998

Query: 184  ARAPSPVCWCSKTEAPVFLHGSYKSKCTEDLAPLLSPVRPAIVRRQVYFPDRRLIQFDCG 5
            ARAPSPVCWCS +E  VFLH SYK KC+E L PLL+P+RPAIVRRQVYFPDRRLIQFDCG
Sbjct: 999  ARAPSPVCWCSTSETNVFLHPSYKQKCSEVLLPLLAPIRPAIVRRQVYFPDRRLIQFDCG 1058

Query: 4    K 2
            K
Sbjct: 1059 K 1059


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score = 1266 bits (3275), Expect = 0.0
 Identities = 675/1058 (63%), Positives = 789/1058 (74%), Gaps = 15/1058 (1%)
 Frame = -3

Query: 3130 KALEAPREPRRPKTHWDHVLEEMLWLSKDFEAERKWKLALAKKIVIRASKNALDPATRGE 2951
            +ALEAP+E RRPKTHWDHVLEEM+WLSKDFE+ERKWKLA AKK+ +RASK  LD ATR E
Sbjct: 9    EALEAPKELRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATREE 68

Query: 2950 KKVKEEEQRLRKVALTISKDVKKFWTKIEKLVLYXXXXXXXXXXXXXXXXXXXXXLGQTE 2771
            +K+KEEEQR+RKVAL ISKDVKKFW KIEKLVLY                     LGQTE
Sbjct: 69   RKLKEEEQRMRKVALNISKDVKKFWIKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTE 128

Query: 2770 RYSTMLAENLVDMPHPCKPTCPDSAMEQLSDQDKE------EDRTELVESPGLSDRMNID 2609
            RYSTMLAENL D     K     S ++Q S   ++      ++  ELV+ P L D  + D
Sbjct: 129  RYSTMLAENLGD-----KSLLQHSILDQPSISYEKGHKCDTKEPAELVDDPQL-DTADND 182

Query: 2608 GDYDIQSEDELDDDEQTVEEDEALITADERQEELEALQNEMDIPLEELLKRYSSGTVSRE 2429
             DYD+QS DE +DDE+T+++DEALIT +ER+EEL AL NE+DIPL ELLKRY++  VSRE
Sbjct: 183  DDYDVQS-DESEDDERTIDQDEALITEEERREELAALHNEIDIPLVELLKRYAALKVSRE 241

Query: 2428 GSPLKSERTAEQIQVEENLSKVKGNHLSVGGDSHTRSAYVTRHHSDVSNGSISMLDNYKP 2249
             +P + E  A+ + VEE     +   L +   +H  S+ ++       NG++ M DN   
Sbjct: 242  NTPERGENGAD-LSVEEG-GPAESKMLIM---NHVSSSNLSLLDMTDVNGALLMKDNCLL 296

Query: 2248 EVDSNQANNQLKGCKNLEKQ-PLISCSDEQEDGDYVLAAXXXXXXXXXXXXXXXXXXXEG 2072
            E +  ++ NQ     +  K+  L   ++EQEDGD+VL                     + 
Sbjct: 297  ETEMGESKNQPDTSLDPAKEHALFDFNEEQEDGDFVLVNGEEKDDETTLSEEEELEKDDP 356

Query: 2071 DTPLNEIELLQKESEMSVEELLARYKKDINSDEDADDEYGYASTDSEDLLDPPAVQHIEH 1892
              P NEI LLQKESEM + ELLARY ++ N+ E ++DE  Y S  S++LLD P  Q +E 
Sbjct: 357  TNPKNEILLLQKESEMPLIELLARYNEEFNN-EVSEDESEYTSALSDNLLDSPDKQDVE- 414

Query: 1891 EGKASPMNDPAVEQDNPCEFKQNSQPGAKLDEVEPQMK--------SDEGKXXXXXXXXX 1736
                  +    V  D      +N +PG  L  ++  +         ++EG          
Sbjct: 415  ------LRQQDVSMD------ENVEPGKSLPVLDHSVNEQERNEKIAEEGNESENRIADA 462

Query: 1735 XXXXXXAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGL 1556
                  AQPTGNTFSTTKVRTKFPFL+KYPLREYQHIGLDWLVTMYEKRLNGILADEMGL
Sbjct: 463  AAAARSAQPTGNTFSTTKVRTKFPFLIKYPLREYQHIGLDWLVTMYEKRLNGILADEMGL 522

Query: 1555 GKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKF 1376
            GKTIMTI+LLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK 
Sbjct: 523  GKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKL 582

Query: 1375 KRQGWMKPNFFHVCITTYRLVIQDSKAFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNS 1196
            KRQGW+KPN FHVCITTYRLVIQDSK FKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNS
Sbjct: 583  KRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNS 642

Query: 1195 KRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISGMVEGQDKVNKEVID 1016
            KRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFK+WFSNPISGMVEGQ++VNKEV+D
Sbjct: 643  KRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKEWFSNPISGMVEGQERVNKEVVD 702

Query: 1015 RLHNVLRPFILRRLKRDVEKQLPGKFEHVIYCRLSKRQRNLYEDFIASSETQATLASTNF 836
            RLHNVLRPFILRRLKRDVEKQLP K EHVIYCRLSKRQRNLYEDFIASSETQATLAS +F
Sbjct: 703  RLHNVLRPFILRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASASF 762

Query: 835  FGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGINMQLSSSICTMLFSGPFTSVDLSGLG 656
            FGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM GI+ QL+SS+C+ML  GPF+SVDLSGLG
Sbjct: 763  FGMISIIMQLRKVCNHPDLFEGRPIISSFDMIGIDFQLNSSVCSMLSPGPFSSVDLSGLG 822

Query: 655  FLFTRLNFSMSSWESDEVRAISTPSSLIKERACLENIEIIGPRLRPNNDNRKRAHGSGIF 476
             LFT L+F+M+SWE DE+ AI+TPS LI+ERA +++IE IGP+    +  RKR  G+ IF
Sbjct: 823  LLFTHLDFNMTSWECDEINAIATPSRLIEERANIDSIEEIGPQ----SKQRKRLPGTNIF 878

Query: 475  EEIQKALWXXXXXXXXXXXASIAWWNSLQCRKKPMYGTNLKDISTVKHPIFDIHFQKSNP 296
            EEI+KAL+           ASIAWWNSL+CRKKP+Y TNL+++ T+K+P+ DI+ QK + 
Sbjct: 879  EEIRKALFEERLREARERAASIAWWNSLRCRKKPIYSTNLQELLTIKNPVDDIYCQKVDR 938

Query: 295  SHYLNFSSKLADIVLSPVERFQRIIKLVECFMFAIPAARAPSPVCWCSKTEAPVFLHGSY 116
              YL +SSKLAD++LSPVERF R+  LVE FMFAIPAARAP P CWCSKT + VFLH +Y
Sbjct: 939  VSYL-YSSKLADVILSPVERFHRMTDLVESFMFAIPAARAPVPTCWCSKTGSSVFLHPTY 997

Query: 115  KSKCTEDLAPLLSPVRPAIVRRQVYFPDRRLIQFDCGK 2
            K KC+E L PLLSP+RPAI+RRQVYFPDRRLIQFDCGK
Sbjct: 998  KEKCSELLLPLLSPIRPAIIRRQVYFPDRRLIQFDCGK 1035


>ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp.
            lyrata] gi|297328630|gb|EFH59049.1|
            photoperiod-independent early flowering 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 2057

 Score = 1246 bits (3225), Expect = 0.0
 Identities = 664/1087 (61%), Positives = 790/1087 (72%), Gaps = 23/1087 (2%)
 Frame = -3

Query: 3193 ISMTSKGPRPRLDHETKAKRQKALEAPREPRRPKTHWDHVLEEMLWLSKDFEAERKWKLA 3014
            I M SKG + + D++++AKR K LEAP+EPRRPKTHWDHVLEEM WLSKDFE+ERKWKLA
Sbjct: 12   IVMASKGGKSKPDNDSRAKRHKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKLA 71

Query: 3013 LAKKIVIRASKNALDPATRGEKKVKEEEQRLRKVALTISKDVKKFWTKIEKLVLYXXXXX 2834
             AKK+ +RASK  LD A+R E+K+KEEEQRLRKVAL ISKD+KKFW K+EKLVLY     
Sbjct: 72   QAKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQLV 131

Query: 2833 XXXXXXXXXXXXXXXXLGQTERYSTMLAENLVDMPHPCK-----PTCPDSAMEQLSDQDK 2669
                            LGQTERYSTMLAENLV+   P K     P+ P  A+E  SD+++
Sbjct: 132  RNEKKKKAMDKQLEFLLGQTERYSTMLAENLVE---PYKQGQNTPSKPLLAIESKSDEER 188

Query: 2668 EED-RTELVESPGL-SDRMNIDGDYDIQSEDELDDDEQTVEEDEALITADERQEELEALQ 2495
             E    E+  S GL S    +D DYD++SEDE +DDE T+EEDE   T  ERQEELEALQ
Sbjct: 189  AEQIPPEINSSAGLESGSPELDEDYDLKSEDETEDDEDTIEEDEKHFTKRERQEELEALQ 248

Query: 2494 NEMDIPLEELLKRYSSGTVSREGSPLKSERTAEQIQVEENLSKVKG----NHLSVGGDSH 2327
            NE+D+P+EELL+RY++G VSRE SP+K E       V    S VK     N  SVG D  
Sbjct: 249  NEVDLPVEELLRRYTAGRVSRETSPVKDENVDNLASVSRETSPVKDENEDNLASVGQDHG 308

Query: 2326 TRSAYVTR----------HHSDVSNGSISMLDNYKPEVDSNQANNQLKGCKNLEKQPLIS 2177
                 +T             S+ S G +++ + +  +++       +K  K   +     
Sbjct: 309  EDKNNLTASEETEGNPNVRRSNDSYGHLAISETHSHDLEPGMTTASVKSRK---EDHTYD 365

Query: 2176 CSDEQEDGDYVLAAXXXXXXXXXXXXXXXXXXXEGDTPLNEIELLQKESEMSVEELLARY 1997
             +DE ED D+V A                    + +  + EI LLQKE+EM +E LLARY
Sbjct: 366  FNDELEDVDFVGATGEEKDDETTLAIEEELAKADNEDHVEEIALLQKENEMPIEVLLARY 425

Query: 1996 KKDINSDEDADDEYGYASTDSEDLLDPPAVQHIEHEGKASPMNDPAVEQDNPCEFKQNSQ 1817
            K+D    + ++D+  Y+   SED +    V   E+  +A   N    E  +  E K + +
Sbjct: 426  KEDFGDKDISEDDSEYSCAQSEDSI----VNSDENRQQADSDN----ENVDSTECKPDPE 477

Query: 1816 PGAK-LDEVEPQMKSDEGKXXXXXXXXXXXXXXXAQPTGNTFSTTKVRTKFPFLLKYPLR 1640
            P ++ ++    ++  D GK               AQPTG T+STTKVRTK PFLLK+ LR
Sbjct: 478  PCSENVEGTFHEITEDNGKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLR 537

Query: 1639 EYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVM 1460
            EYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI+LLAHLAC+KGIWGPHLIVVPTSVM
Sbjct: 538  EYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVM 597

Query: 1459 LNWETEFLKWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFKRKK 1280
            LNWETEFLKWCPAFKILTYFGSAKERK KRQGWMK N FHVCITTYRLVIQDSK FKRKK
Sbjct: 598  LNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKK 657

Query: 1279 WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQS 1100
            WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQS
Sbjct: 658  WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQS 717

Query: 1099 HQEFKDWFSNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHVIYC 920
            HQEFKDWF NPI+GMVEGQ+K+NKEVIDRLHNVLRPF+LRRLKRDVEKQLP K EHVI+C
Sbjct: 718  HQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFC 777

Query: 919  RLSKRQRNLYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMS 740
            RLSKRQRNLYEDFIAS+ETQATL S +FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM+
Sbjct: 778  RLSKRQRNLYEDFIASTETQATLNSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMA 837

Query: 739  GINMQLSSSICTMLFSGPFTSVDLSGLGFLFTRLNFSMSSWESDEVRAISTPSSLIKERA 560
            GI++QLSS+IC++L   PF+ VDL  LGFLFT L+FSM+SWE DE++AISTPS LIK+R 
Sbjct: 838  GIDVQLSSTICSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSELIKQRV 897

Query: 559  CL-ENIEIIGPRLRPNNDNRKRAHGSGIFEEIQKALWXXXXXXXXXXXASIAWWNSLQCR 383
             L +++E I   L+    NRK   G+ IFEEI+KA++           A+IAWWNSL+C+
Sbjct: 898  NLKDDMEAIPLSLK----NRKNLQGTNIFEEIRKAVFEERVKETKDRAAAIAWWNSLRCQ 953

Query: 382  KKPMYGTNLKDISTVKHPIFDIHFQKSNPSHYLNFSSKLADIVLSPVERFQRIIKLVECF 203
            +KP Y T+L+ + T+K P+ DIH  K+N S Y+ +SS LADIVLSP+ERFQ++I+LVE F
Sbjct: 954  RKPTYSTSLRTLLTIKGPLDDIHHLKANCSSYM-YSSILADIVLSPIERFQQMIELVEAF 1012

Query: 202  MFAIPAARAPSPVCWCSKTEAPVFLHGSYKSKCTEDLAPLLSPVRPAIVRRQVYFPDRRL 23
             F IPAAR PSP CWCSK+++PVFL  SYK K T+ L+PLLSP+RPAIVRRQVYFPDRRL
Sbjct: 1013 TFVIPAARVPSPACWCSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRL 1072

Query: 22   IQFDCGK 2
            IQFDCGK
Sbjct: 1073 IQFDCGK 1079


>ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1|
            photoperiod independent early flowering1 [Arabidopsis
            thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1
            [Arabidopsis thaliana]
          Length = 2055

 Score = 1236 bits (3198), Expect = 0.0
 Identities = 661/1086 (60%), Positives = 789/1086 (72%), Gaps = 22/1086 (2%)
 Frame = -3

Query: 3193 ISMTSKGPRPRLDHETKAKRQKALEAPREPRRPKTHWDHVLEEMLWLSKDFEAERKWKLA 3014
            I M SK  + + D+E++AKRQK LEAP+EPRRPKTHWDHVLEEM WLSKDFE+ERKWKLA
Sbjct: 12   IVMASKSGKSKPDNESRAKRQKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKLA 71

Query: 3013 LAKKIVIRASKNALDPATRGEKKVKEEEQRLRKVALTISKDVKKFWTKIEKLVLYXXXXX 2834
             AKK+ +RASK  LD A+R E+K+KEEEQRLRKVAL ISKD+KKFW K+EKLVLY     
Sbjct: 72   QAKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQLV 131

Query: 2833 XXXXXXXXXXXXXXXXLGQTERYSTMLAENLVDMPHPCK-----PTCPDSAMEQLSDQDK 2669
                            LGQTERYSTMLAENLV+   P K     P+ P   +E  SD+++
Sbjct: 132  RNEKKKKAMDKQLEFLLGQTERYSTMLAENLVE---PYKQGQNTPSKPLLTIESKSDEER 188

Query: 2668 EED-RTELVESPGL-SDRMNIDGDYDIQSEDELDDDEQTVEEDEALITADERQEELEALQ 2495
             E    E+  S GL S    +D DYD++SEDE +DDE T+EEDE   T  ERQEELEALQ
Sbjct: 189  AEQIPPEINSSAGLESGSPELDEDYDLKSEDETEDDEDTIEEDEKHFTKRERQEELEALQ 248

Query: 2494 NEMDIPLEELLKRYSSGTVSREGSPLKSERTAEQIQVEENLSKVKG----NHLSVGGD-- 2333
            NE+D+P+EELL+RY+SG VSRE SP+K E       V    S VK     N  SVG D  
Sbjct: 249  NEVDLPVEELLRRYTSGRVSRETSPVKDENEDNLTSVSRVTSPVKDENQDNLASVGQDHG 308

Query: 2332 --------SHTRSAYVTRHHSDVSNGSISMLDNYKPEVDSNQANNQLKGCKNLEKQPLIS 2177
                    S       +   S+ S G +++ + +  +++       +K  K   +     
Sbjct: 309  EDKNNLAASEETEGNPSVRRSNDSYGHLAISETHSHDLEPGMTTASVKSRK---EDHTYD 365

Query: 2176 CSDEQEDGDYVLAAXXXXXXXXXXXXXXXXXXXEGDTPLNEIELLQKESEMSVEELLARY 1997
             +DEQED D+VLA                    + +  + EI LLQKESEM +E LLARY
Sbjct: 366  FNDEQEDVDFVLANGEEKDDEATLAVEEELAKADNEDHVEEIALLQKESEMPIEVLLARY 425

Query: 1996 KKDINSDEDADDEYGYASTDSEDLLDPPAVQHIEHEGKASPMNDPAVEQDNPCEFKQNSQ 1817
            K+D    + ++DE   +   SED     ++   +   + + ++D  V+     E K + +
Sbjct: 426  KEDFGGKDISEDESESSFAVSED-----SIVDSDENRQQADLDDDNVDLT---ECKLDPE 477

Query: 1816 PGAK-LDEVEPQMKSDEGKXXXXXXXXXXXXXXXAQPTGNTFSTTKVRTKFPFLLKYPLR 1640
            P ++ ++    ++  D  K               AQPTG T+STTKVRTK PFLLK+ LR
Sbjct: 478  PCSENVEGTFHEVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLR 537

Query: 1639 EYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVM 1460
            EYQHIGLDWLVTMYEK+LNGILADEMGLGKTIMTI+LLAHLAC+KGIWGPHLIVVPTSVM
Sbjct: 538  EYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVM 597

Query: 1459 LNWETEFLKWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFKRKK 1280
            LNWETEFLKWCPAFKILTYFGSAKERK KRQGWMK N FHVCITTYRLVIQDSK FKRKK
Sbjct: 598  LNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKK 657

Query: 1279 WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQS 1100
            WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQS
Sbjct: 658  WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQS 717

Query: 1099 HQEFKDWFSNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHVIYC 920
            HQEFKDWF NPI+GMVEGQ+K+NKEVIDRLHNVLRPF+LRRLKRDVEKQLP K EHVI+C
Sbjct: 718  HQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFC 777

Query: 919  RLSKRQRNLYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMS 740
            RLSKRQRNLYEDFIAS+ETQATL S +FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM+
Sbjct: 778  RLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMA 837

Query: 739  GINMQLSSSICTMLFSGPFTSVDLSGLGFLFTRLNFSMSSWESDEVRAISTPSSLIKERA 560
            GI++QLSS+IC++L   PF+ VDL  LGFLFT L+FSM+SWE DE++AISTPS LIK+R 
Sbjct: 838  GIDVQLSSTICSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSELIKQRV 897

Query: 559  CLENIEIIGPRLRPNNDNRKRAHGSGIFEEIQKALWXXXXXXXXXXXASIAWWNSLQCRK 380
             L++ ++    L P   NRK   G+ IFEEI+KA++           A+IAWWNSL+C++
Sbjct: 898  NLKD-DLEAIPLSPK--NRKNLQGTNIFEEIRKAVFEERIQESKDRAAAIAWWNSLRCQR 954

Query: 379  KPMYGTNLKDISTVKHPIFDIHFQKSNPSHYLNFSSKLADIVLSPVERFQRIIKLVECFM 200
            KP Y T+L+ + T+K P+ D+   K+N S Y+ +SS LADIVLSP+ERFQ++I+LVE F 
Sbjct: 955  KPTYSTSLRTLLTIKGPLDDL---KANCSSYM-YSSILADIVLSPIERFQKMIELVEAFT 1010

Query: 199  FAIPAARAPSPVCWCSKTEAPVFLHGSYKSKCTEDLAPLLSPVRPAIVRRQVYFPDRRLI 20
            FAIPAAR PSP CWCSK+++PVFL  SYK K T+ L+PLLSP+RPAIVRRQVYFPDRRLI
Sbjct: 1011 FAIPAARVPSPTCWCSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLI 1070

Query: 19   QFDCGK 2
            QFDCGK
Sbjct: 1071 QFDCGK 1076