BLASTX nr result

ID: Cimicifuga21_contig00019942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019942
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531072.1| conserved hypothetical protein [Ricinus comm...    58   2e-13
ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-13
ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793...    59   6e-13
ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804...    57   6e-13
ref|NP_199670.1| uncharacterized protein [Arabidopsis thaliana] ...    48   5e-11

>ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis]
           gi|223529318|gb|EEF31286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score = 58.2 bits (139), Expect(2) = 2e-13
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = +1

Query: 88  VSMVPKLSKCITDNKSDIWPSKCREIDSVHSLKVQEMIRYHLATILRMRGKSSTMD 255
           V +VPKLS+CI + + +I PSK  E++S+HS +V EMI+ H+ T++ +R  SS  D
Sbjct: 173 VPLVPKLSRCIYNGRLEIGPSKDWELESIHSFEVLEMIKEHVCTVIGLRANSSVTD 228



 Score = 42.4 bits (98), Expect(2) = 2e-13
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   RIAGMKENECQIAVEDVMYMSIV-QFSKMMFPWFP 103
           RIA +KE+ECQIAVEDVMYM I  +FS++  P  P
Sbjct: 143 RIAQLKEHECQIAVEDVMYMLIFSKFSEIRVPLVP 177


>ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 57.8 bits (138), Expect(2) = 2e-13
 Identities = 25/56 (44%), Positives = 41/56 (73%)
 Frame = +1

Query: 88  VSMVPKLSKCITDNKSDIWPSKCREIDSVHSLKVQEMIRYHLATILRMRGKSSTMD 255
           V +VPKLS+CI + + +I PSK  E++S+HS +V EM+R H++T++ ++  SS  D
Sbjct: 39  VPLVPKLSRCIYNGRLEIRPSKDWELESIHSFEVLEMVREHVSTVIGLKANSSVAD 94



 Score = 42.4 bits (98), Expect(2) = 2e-13
 Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   RIAGMKENECQIAVEDVMYMSIV-QFSKMMFPWFP 103
           RIA +KE+ECQ+AVEDVMYM ++ +FS++  P  P
Sbjct: 9   RIAELKEHECQVAVEDVMYMLVLYKFSEIRVPLVP 43


>ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max]
          Length = 393

 Score = 58.9 bits (141), Expect(2) = 6e-13
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = +1

Query: 88  VSMVPKLSKCITDNKSDIWPSKCREIDSVHSLKVQEMIRYHLATILRMRGKSSTMD 255
           V MVPKLS C+ + + +I PSK  E++S+HSL+V +MIR H+ T+  +R KSS  +
Sbjct: 164 VPMVPKLSSCLYNGRLEILPSKDWELESIHSLEVLDMIREHITTVTGLRAKSSVTE 219



 Score = 39.7 bits (91), Expect(2) = 6e-13
 Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   RIAGMKENECQIAVEDVMYMSI-VQFSKMMFPWFP 103
           RIA +KEN+CQIAVEDV+Y+ I  +FS++  P  P
Sbjct: 134 RIALVKENQCQIAVEDVIYLLIFYKFSEIRVPMVP 168


>ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max]
          Length = 388

 Score = 56.6 bits (135), Expect(2) = 6e-13
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = +1

Query: 88  VSMVPKLSKCITDNKSDIWPSKCREIDSVHSLKVQEMIRYHLATILRMRGKSSTMD 255
           V MVPKLS C+ + + +I PSK  E++S+HS +V +MIR H+ T+  +R KSS  +
Sbjct: 159 VPMVPKLSSCLYNGRLEILPSKDWELESIHSSEVLDMIREHITTVTGLRAKSSVTE 214



 Score = 42.0 bits (97), Expect(2) = 6e-13
 Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   RIAGMKENECQIAVEDVMYMSI-VQFSKMMFPWFP 103
           RIA +KEN+CQIAVEDVMY+ I  +FS++  P  P
Sbjct: 129 RIAQVKENQCQIAVEDVMYLLIFYKFSEIRVPMVP 163


>ref|NP_199670.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177349|dbj|BAB10692.1| unnamed protein product
           [Arabidopsis thaliana] gi|28392972|gb|AAO41921.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973189|gb|AAO63919.1| unknown protein [Arabidopsis
           thaliana] gi|332008309|gb|AED95692.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 344

 Score = 48.1 bits (113), Expect(2) = 5e-11
 Identities = 23/56 (41%), Positives = 35/56 (62%)
 Frame = +1

Query: 88  VSMVPKLSKCITDNKSDIWPSKCREIDSVHSLKVQEMIRYHLATILRMRGKSSTMD 255
           V +VPKL  CI + + +I PSK  E++S+HS  V E+I+ H   ++ +R  SS  D
Sbjct: 146 VPLVPKLPSCIYNGRLEISPSKDWELESIHSFDVLELIKEHSNAVISLRVNSSLTD 201



 Score = 43.9 bits (102), Expect(2) = 5e-11
 Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +2

Query: 2   RIAGMKENECQIAVEDVMYMSIV-QFSKMMFPWFPNYPN 115
           RIA +KE++CQIA+ED+MYM I+ +FS++  P  P  P+
Sbjct: 116 RIAQLKESDCQIAIEDIMYMLILYKFSEIRVPLVPKLPS 154


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