BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019892
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana] ...    66   3e-09
ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana] gi|...    66   3e-09
ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arab...    63   2e-08
gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]             62   4e-08
ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula] g...    62   4e-08

>ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|238055474|sp|Q9CAZ0.2|SKI24_ARATH RecName: Full=F-box
           protein SKIP24; AltName: Full=SKP1-interacting partner
           24 gi|332190217|gb|AEE28338.1| F-box protein SKIP24
           [Arabidopsis thaliana]
          Length = 295

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = +3

Query: 9   KILEIGVKKSILGCAEVCSFSICSKHFNKLANVDSLWSILLALDFPNYQNDDGSSSK--- 179
           KILEIGVK S     ++C  SI S+   +L+  DSLW +LL  DFPN+     SSS+   
Sbjct: 13  KILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSASSSSESPT 72

Query: 180 KTLYKCRLGRYIKRKLASLECKLDEDMNRLDCFTHRIERCESKMLWIDDKIEKISGESPD 359
           K +Y  R  R  +RKLA+    L    + +  +  RI   E+++    ++++  S +  D
Sbjct: 73  KFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQSSSLQFSD 132

Query: 360 MMKDSMQAIA 389
           ++K    ++A
Sbjct: 133 LLKVRQASVA 142


>ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|17529082|gb|AAL38751.1| unknown protein [Arabidopsis
           thaliana] gi|22136746|gb|AAM91692.1| unknown protein
           [Arabidopsis thaliana] gi|332190216|gb|AEE28337.1| F-box
           protein SKIP24 [Arabidopsis thaliana]
          Length = 274

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = +3

Query: 9   KILEIGVKKSILGCAEVCSFSICSKHFNKLANVDSLWSILLALDFPNYQNDDGSSSK--- 179
           KILEIGVK S     ++C  SI S+   +L+  DSLW +LL  DFPN+     SSS+   
Sbjct: 13  KILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSASSSSESPT 72

Query: 180 KTLYKCRLGRYIKRKLASLECKLDEDMNRLDCFTHRIERCESKMLWIDDKIEKISGESPD 359
           K +Y  R  R  +RKLA+    L    + +  +  RI   E+++    ++++  S +  D
Sbjct: 73  KFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQSSSLQFSD 132

Query: 360 MMKDSMQAIA 389
           ++K    ++A
Sbjct: 133 LLKVRQASVA 142


>ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arabidopsis lyrata subsp.
           lyrata] gi|297335552|gb|EFH65969.1| hypothetical protein
           ARALYDRAFT_311923 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 9   KILEIGVKKSILGCAEVCSFSICSKHFNKLANVDSLWSILLALDFPNY--QNDDGSSSKK 182
           KI+EIGVK S     ++C  SI S+   +L+  DSLW +LL LDFP +        S  K
Sbjct: 13  KIMEIGVKSSTFSYKDLCCISISSRRLCRLSCDDSLWDLLLFLDFPTHIVSASSSQSPSK 72

Query: 183 TLYKCRLGRYIKRKLASLECKLDEDMNRLDCFTHRIERCESKMLWIDDKIEKISGESPDM 362
            +Y+ R  R  +RK+A+    L    + +  +  RI   E+++    +++   S +  D+
Sbjct: 73  FIYRTRFEREKERKVAAHRRALLRKESEISEWGRRIRELEARLSDEAERLHSSSLQFSDL 132

Query: 363 MKDSMQAIA 389
           +K    ++A
Sbjct: 133 LKVRQASVA 141


>gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]
          Length = 313

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
 Frame = +3

Query: 9   KILEIGVKKSILGCAEVCSFSICSKHFNKLANVDSLWSILLALDFPNYQNDDGSSSK--- 179
           KILEIGVK S     ++C  SI S+   +L+  DSLW +LL  DFPN+     SSS+   
Sbjct: 13  KILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSASSSSESPT 72

Query: 180 KTLYKCRLGRYIKRKLASLECKLDEDMNRLDCFTHRIERCESKMLWIDDKIEKISGES 353
           K +Y  R  R  +RKLA+    L    + +  +  RI   E++   + D+ E++   S
Sbjct: 73  KFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEAR---LSDEAERLQQAS 127


>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499791|gb|AES80994.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 269

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
 Frame = +3

Query: 9   KILEIGVKKSILGCAEVCSFSICSKHFNKLANVDSLWSILLALDFPNYQNDDGSSSKKTL 188
           KILEIG++   L   ++C  SI  +  ++L+  DSLW+ LL+ DFP+      SSS K+L
Sbjct: 11  KILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSSSSSSKSL 70

Query: 189 YKCRLGRYIKRKLAS-------LECKLDEDMNRLDCFTHRIERCESK 308
           YK R  R  +RK+A+        E ++ E   RL    H I+ C S+
Sbjct: 71  YKLRFERDKERKIAAHRRVVLRKESQILEHSRRL----HDIQTCVSQ 113