BLASTX nr result

ID: Cimicifuga21_contig00019881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019881
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28382.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    80   3e-13
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...    78   1e-12
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    76   7e-12

>emb|CBI28382.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
 Frame = +2

Query: 218 IDVADVQIWNNAAFDS---DESTAIKASLSSLQINSSIGSERVEFDSYSSKENYGPAMCR 388
           ++ +D+QIWNNAAFDS   ++S+ IKA  + L+   +  SE +  DS   KEN  P + +
Sbjct: 4   VEDSDLQIWNNAAFDSGDFEDSSGIKAPWTPLKNIFTNVSESI--DSDQGKENIIPVIVK 61

Query: 389 -SPVCIKSPMPIKPLFPSNINGHSQGKPLKVLFKQGLLPLPTQDVSDTGKEAIRDDSVID 565
            S V +KS +P+ PL   +    SQGK +KVL                 +E +RD+  ID
Sbjct: 62  QSAVSVKSSVPMNPLQAKSATVKSQGKSVKVL----------------EEEEVRDEGKID 105

Query: 566 AEMEEIRNEITRLSMXXXXXXXXXXXXNSKPIERTRPPVTPKFL 697
           AE+EEIR EI+RLS             ++K +E+    V  KF+
Sbjct: 106 AEIEEIRLEISRLSSRLDELCLEKVKRSAKMVEKRGRIVAAKFM 149


>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
 Frame = +2

Query: 218 IDVADVQIWNNAAFDS---DESTAIKASLSSLQINSSIGSERVEFDSYSSKENYGPAMCR 388
           ++ +D+QIWNNAAFDS   ++S+ IKA  + L+   +  SE +  DS   KEN  P + +
Sbjct: 4   VEDSDLQIWNNAAFDSGDFEDSSGIKAPWTPLKNIFTNVSESI--DSDQGKENIIPVIVK 61

Query: 389 -SPVCIKSPMPIKPLFPSNINGHSQGKPLKVLFKQGLLPLPTQDVSDTGKEAIRDDSVID 565
            S V +KS +P+ PL   +    SQGK +KVL                 +E +RD+  ID
Sbjct: 62  QSAVSVKSSVPMNPLQAKSATVKSQGKSVKVL----------------EEEEVRDEGKID 105

Query: 566 AEMEEIRNEITRLSMXXXXXXXXXXXXNSKPIERTRPPVTPKFL 697
           AE+EEIR EI+RLS             ++K +E+    V  KF+
Sbjct: 106 AEIEEIRLEISRLSSRLDELCLEKVKRSAKMVEKRGRIVAAKFM 149


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
 Frame = +2

Query: 194 SVLQYPNSIDVADVQIWNNAAFDSDESTAIKASLSSLQINSSIGSERVEFDSYSSKENYG 373
           S+LQYP++I+  ++Q+WNNAAFD+ ES        S+ +  S        +S  SKEN  
Sbjct: 3   SILQYPDAINPPELQVWNNAAFDNGESE------DSIGMTKSSSWWTQSLESSCSKENMS 56

Query: 374 PAMCRSPVCIK---SPMPIKPLFPSNINGHSQG---KPLKVLFKQGLLPLPTQDVSDTGK 535
           P   + PV  K   S +PIKPL  ++   +SQG    P+K+L KQG L      VS    
Sbjct: 57  PVFEKPPVSFKSSVSSIPIKPLNSNSNIVNSQGNNKNPMKILLKQGGL------VSKIVN 110

Query: 536 EAIRDDSVIDAEMEEIRNEITRLSMXXXXXXXXXXXXNSKPIERTRPPVTPKFL 697
           +   +++ ID E+E+I  EI+RLS             +   +E+T   V  K +
Sbjct: 111 Q--EEETKIDKEIEQIEKEISRLSSRLEALRLEKAERSLNTVEKTGRFVPEKIM 162


>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 63/171 (36%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
 Frame = +2

Query: 194 SVLQYPNSIDVADVQIWNNAAFDSDESTAIKASLSSLQINSSIGSERVEFDSYSSKENYG 373
           +VLQYP+ +D  +VQIWNNAAFD+ ES        SL + SS  ++ +E D  +SKEN  
Sbjct: 3   NVLQYPDVVDAPEVQIWNNAAFDNGESE------DSLNLKSSWWNQSLESD--ASKENLS 54

Query: 374 PAMCR--SPVCIKSPMPIKPLFPSNINGHSQGKPLKVLFKQGLLPLPTQDVSDTGKEAIR 547
           P +C   SP+ + S  P KPL  +    +SQG       K GL    ++ V    +    
Sbjct: 55  P-VCEKSSPIYVNSSKPTKPLQSNPNPFNSQGSN---SMKVGL----SKMVEKNEEIKNH 106

Query: 548 DDSVIDAEMEEIRNEITRLSMXXXXXXXXXXXXN-SKPIERTRPPVTPKFL 697
           D+  ID E+EEI  EI RLS             N SK +E+    V  KF+
Sbjct: 107 DEKKIDIEIEEIEKEIKRLSSRLEVLRLEKAERNLSKTVEKRGRVVAAKFM 157


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 65/171 (38%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
 Frame = +2

Query: 194 SVLQYPNSIDVADVQIWNNAAFDSDESTAIKASLSSLQINSSIGSERVEFDSYSSKENYG 373
           S+LQYP+ +D  +VQIWNNAAFD+ ES        SL + SS  ++ +E  S  SKEN  
Sbjct: 3   SLLQYPDGVDAPEVQIWNNAAFDNGESE------DSLNLKSSWWTQSLE--SNGSKENLS 54

Query: 374 PAMCR--SPVCIKSPMPIKPLFPSNINGHSQGKPLKVLFKQGLLPLPTQDVSDTGKEAIR 547
           P +C   SPV + S  P KPL  SN N       +  L    L    ++ V+   +   R
Sbjct: 55  P-VCEKSSPVFVNSSNPTKPL-QSNTN------LVNSLGSSSLKIGVSKMVAKNEEIKNR 106

Query: 548 DDSVIDAEMEEIRNEITRLSMXXXXXXXXXXXXN-SKPIERTRPPVTPKFL 697
           D+  ID E+EEI  EI RLS             N SK IE+    V  KF+
Sbjct: 107 DEKKIDMEIEEIEREIKRLSSRLEALRLEKVERNISKTIEKRGRIVAAKFM 157


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