BLASTX nr result
ID: Cimicifuga21_contig00019874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00019874
(752 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 116 4e-24
ref|XP_002313011.1| predicted protein [Populus trichocarpa] gi|2... 113 4e-23
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 112 6e-23
emb|CBI37995.3| unnamed protein product [Vitis vinifera] 112 6e-23
emb|CBI17411.3| unnamed protein product [Vitis vinifera] 112 6e-23
>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 19-like [Cucumis sativus]
Length = 1475
Score = 116 bits (291), Expect = 4e-24
Identities = 91/251 (36%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Frame = -1
Query: 746 SILSHFDVQALLLEYITRNNLRDPHQKSQILCDSRLESLFGKACIGHFEMLRYLRSH-LM 570
++LS FDVQALLLEYI RN LRDP +KSQI+CDSRLESLFGK +GHFEML+ L SH L+
Sbjct: 430 TVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLESLFGKPRVGHFEMLKLLESHFLI 489
Query: 569 KKDTQVVNIQSRLFDTKRSQMETGEPLEKLVANKIGKMSNKNDHISPKINGDGYAAIVAP 390
K+D Q+ ++ + +T+ SQ+E DG
Sbjct: 490 KEDAQINDLHVSVAETESSQLE----------------------------ADG------- 514
Query: 389 LETKGHSETSGKASANSRLEIPKMGEHRSQTNL-DYASVDIELMTEGNAMPLKKPRVYKR 213
++ SGK + K E Q+NL DYA++DI + N + LK
Sbjct: 515 ------TDGSGKIKKEKKRRTRKKXERGLQSNLDDYAAIDIHNI---NLIYLK------- 558
Query: 212 LKLRKRGVHTSVQRNLGDYAAIDVHNIXXXXXXXXXXXXXXXDIDKFHDRVVGSFVRISI 33
RNL +Y D + FHD+VVGSFVRI I
Sbjct: 559 -------------RNLVEYLIEDE--------------------ESFHDKVVGSFVRIRI 585
Query: 32 D-SNQKQEMHR 3
S QKQ+++R
Sbjct: 586 SGSAQKQDLYR 596
>ref|XP_002313011.1| predicted protein [Populus trichocarpa] gi|222849419|gb|EEE86966.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 113 bits (283), Expect = 4e-23
Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Frame = -1
Query: 752 DTSILSHFDVQALLLEYITRNNLRDPHQKSQILCDSRLESLFGKACIGHFEMLRYLRSH- 576
D S S FDVQALLLEYI RN LRDPH+KSQI+CDSRLE+LFGK +GHFEML+ L SH
Sbjct: 180 DKSACSQFDVQALLLEYIKRNKLRDPHRKSQIICDSRLENLFGKPRVGHFEMLKLLESHY 239
Query: 575 LMKKDTQVVNIQSRLFDTKRSQME---TGEPLEKLVANKIGKMSNKNDHISPKINGDGYA 405
L+K D+Q ++Q + DT+ +Q+E + L K +K + K + + N D YA
Sbjct: 240 LLKDDSQADDLQGSVVDTEANQLEADGNSDALMKASKDKRRRSRKKGEGRGLQSNIDDYA 299
Query: 404 AI 399
AI
Sbjct: 300 AI 301
Score = 62.4 bits (150), Expect = 1e-07
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -1
Query: 269 ELMTEGNAMPLKKPRVYKRLKLRKRGVHTSVQRNLGDYAAIDVHNIXXXXXXXXXXXXXX 90
+L +GN+ L K KR + RK+G +Q N+ DYAAID+HNI
Sbjct: 261 QLEADGNSDALMKASKDKRRRSRKKGEGRGLQSNIDDYAAIDMHNINLIYLRRSLLEDLI 320
Query: 89 XDIDKFHDRVVGSFVRISID-SNQKQEMHR 3
D + F+++VVGSFVRI I S QKQ+++R
Sbjct: 321 EDTEAFYNKVVGSFVRIRISGSAQKQDLYR 350
>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Vitis vinifera]
Length = 1643
Score = 112 bits (281), Expect = 6e-23
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Frame = -1
Query: 752 DTSILSHFDVQALLLEYITRNNLRDPHQKSQILCDSRLESLFGKACIGHFEMLRYLRSHL 573
DTS+LS FDVQALLLEYI RNNLRDP +KSQI+CD RL +LFGKA +GHFEML+ L SH
Sbjct: 354 DTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLLESHF 413
Query: 572 MKKDTQVVN--IQSRLFDTKRSQMETGEPLE---KLVANKIGKMSNKNDHISPKINGDGY 408
+ K+ + ++ + DT SQ++ E + ++ +K K K D P+ N D Y
Sbjct: 414 LIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQTNLDEY 473
Query: 407 AAI 399
AAI
Sbjct: 474 AAI 476
Score = 55.8 bits (133), Expect = 9e-06
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -1
Query: 218 KRLKLRKRGVHTSVQRNLGDYAAIDVHNIXXXXXXXXXXXXXXXDIDKFHDRVVGSFVRI 39
K+ K RK+G Q NL +YAAIDVHNI D++ F +VVGS VRI
Sbjct: 453 KKRKTRKKGDERGPQTNLDEYAAIDVHNINLIYLRRILMENLIEDVETFQAKVVGSIVRI 512
Query: 38 SID-SNQKQEMHR 3
I S+QKQ+M+R
Sbjct: 513 RISGSDQKQDMYR 525
>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
Length = 868
Score = 112 bits (281), Expect = 6e-23
Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Frame = -1
Query: 752 DTSILSHFDVQALLLEYITRNNLRDPHQKSQILCDSRLESLFGKACIGHFEMLRYLRSH- 576
D S+ S FDVQALLLEYI RN LRDP +KSQI+CDSRLE LFGK +GHFEML+ L SH
Sbjct: 360 DKSVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEMLKLLESHF 419
Query: 575 LMKKDTQVVNIQSRLFDTKRSQMETG---EPLEKLVANKIGKMSNKNDHISPKINGDGYA 405
L K+D+Q ++Q + D++ SQ+E + L K+ ++ K K D + N D YA
Sbjct: 420 LNKEDSQTDDLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQSNLDDYA 479
Query: 404 AI 399
AI
Sbjct: 480 AI 481
Score = 67.0 bits (162), Expect = 4e-09
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Frame = -1
Query: 335 LEIPKMGEHRSQTN-LDYASVDIE---LMTEGNAMPLKKPRVYKRLKLRKRGVHTSVQRN 168
LE + + SQT+ L + VD E L +GN L K +R K RK+G Q N
Sbjct: 415 LESHFLNKEDSQTDDLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQSN 474
Query: 167 LGDYAAIDVHNIXXXXXXXXXXXXXXXDIDKFHDRVVGSFVRISID-SNQKQEMHR 3
L DYAAID+HNI D +K HD+VVG+FVRI I S QKQ+++R
Sbjct: 475 LDDYAAIDIHNISLIYLRRNLMEDLIEDTEKLHDKVVGAFVRIRISGSGQKQDVYR 530
>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 112 bits (281), Expect = 6e-23
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Frame = -1
Query: 752 DTSILSHFDVQALLLEYITRNNLRDPHQKSQILCDSRLESLFGKACIGHFEMLRYLRSHL 573
DTS+LS FDVQALLLEYI RNNLRDP +KSQI+CD RL +LFGKA +GHFEML+ L SH
Sbjct: 354 DTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLLESHF 413
Query: 572 MKKDTQVVN--IQSRLFDTKRSQMETGEPLE---KLVANKIGKMSNKNDHISPKINGDGY 408
+ K+ + ++ + DT SQ++ E + ++ +K K K D P+ N D Y
Sbjct: 414 LIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQTNLDEY 473
Query: 407 AAI 399
AAI
Sbjct: 474 AAI 476
Score = 55.8 bits (133), Expect = 9e-06
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -1
Query: 218 KRLKLRKRGVHTSVQRNLGDYAAIDVHNIXXXXXXXXXXXXXXXDIDKFHDRVVGSFVRI 39
K+ K RK+G Q NL +YAAIDVHNI D++ F +VVGS VRI
Sbjct: 453 KKRKTRKKGDERGPQTNLDEYAAIDVHNINLIYLRRILMENLIEDVETFQAKVVGSIVRI 512
Query: 38 SID-SNQKQEMHR 3
I S+QKQ+M+R
Sbjct: 513 RISGSDQKQDMYR 525